Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.2 4.1e+03 -2.4 0.3 6 13 37 44 36 46 0.86

2 4 1.5 5.1e+03 -2.6 0.0 9 14 80 85 78 88 0.81

3 4 2.1e-18 6.9e-15 54.5 3.2 1 34 106 138 106 140 0.97

4 4 4.9e-18 1.6e-14 53.3 5.3 1 34 166 198 166 200 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.2	4.1e+03	-2.4	0.3	6	13	37	44	36	46	0.86
2	4	1.5	5.1e+03	-2.6	0.0	9	14	80	85	78	88	0.81
3	4	2.1e-18	6.9e-15	54.5	3.2	1	34	106	138	106	140	0.97
4	4	4.9e-18	1.6e-14	53.3	5.3	1	34	166	198	166	200	0.98

Coding Sequence: ATGATGTTTTCTGGAACATCTACCATGGCATCTACTAGCTACGATTCATCCAGTTCTGGTGTTTACGGAAGTAGCGATGGATCTGTAGTACAGTATGTTGCTCCCAGAACTAGTAGTACATCAGCATGGCATGATCCATATCAAAACCACCATgtccatcatcatcatcacccTCATTTATCTCATCATCACCAACAGCATCAGTTAACTGCCCCTCCCACAAACACTTTCTACCCGACAATGATGTGGCGATCATACGATCACTATAGACCCCATTATGATACGAGTGGAATGGAGATGGGCGAGGGTAGAGAGTGTGTCAATTGTGGAGCGATCAGTACCCCATTATGGCGAAGAGATGGCACTGGCCATTATCTTTGCAATGCTTGCGGTCTATATCACAAGATGAATGGCATGAACAGACCTTTGGTGAAGCCTGCCAAGAGGATGGTCAGTCCACACACAcagAACGCCACTCGTCGCTTAGGCTTGTGCTGCACCAATTGCGGCACTGGAACAACAACTCTATGGAGGAGAAATAACGAAGGTGACCCGGTCTGTAACGCTTGTGGTCTATATTTTAAACTTCATGGAATTAATCGCCCTTTAGCAATGCGAAAAGATGGTATACAGACTAGAAAACGAAAACCAAAGAAATCATCGCAAGATTCAACACCAAGTAGCACCCAATCGTCAGTTCCTTCAGataACAATAAGCTTTTGGCAAATGTACCTAACGATAGGCCATATTTAGGTCAGACTTCTCTATTACTTGGCCAGAGTAGTATTAAATCAGAGCCAGTGCCAACACAGTTTACAGAACATTTGCCAGAACCTTATTACCATCCTGGTCAATCACATTACAACTTACAGCACTCTGATTATCttggaaataaattaatggcatcaacttaa
Protein Sequence: MMFSGTSTMASTSYDSSSSGVYGSSDGSVVQYVAPRTSSTSAWHDPYQNHHVHHHHHPHLSHHHQQHQLTAPPTNTFYPTMMWRSYDHYRPHYDTSGMEMGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPAKRMVSPHTQNATRRLGLCCTNCGTGTTTLWRRNNEGDPVCNACGLYFKLHGINRPLAMRKDGIQTRKRKPKKSSQDSTPSSTQSSVPSDNNKLLANVPNDRPYLGQTSLLLGQSSIKSEPVPTQFTEHLPEPYYHPGQSHYNLQHSDYLGNKLMAST

Sequence clustering based on sequence similarity using MMseqs2