Basic Information

Insect: Rhodnius prolixus
Gene Symbol: -
Assembly: None
Location: HiC:19785404-19797453[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0003 0.034 14.8 1.4 2 22 432 452 431 455 0.90

2 16 0.00018 0.02 15.5 4.2 1 22 516 537 516 540 0.90

3 16 0.024 2.7 8.8 0.1 1 23 594 618 594 618 0.97

4 16 0.016 1.8 9.3 0.2 3 23 691 712 690 712 0.96

5 16 0.0024 0.27 11.9 4.6 1 23 746 768 746 768 0.94

6 16 3.5e-05 0.0039 17.7 0.9 2 23 777 798 776 798 0.96

7 16 0.091 10 7.0 0.5 3 21 809 827 807 828 0.91

8 16 0.00097 0.11 13.2 1.4 1 23 837 860 837 860 0.96

9 16 0.0013 0.14 12.8 2.0 2 19 893 910 892 915 0.93

10 16 0.035 3.9 8.3 0.4 3 20 955 972 953 974 0.93

11 16 7.3 8.1e+02 1.0 0.1 1 21 1091 1111 1091 1112 0.88

12 16 1.8 2e+02 2.9 0.1 3 19 1123 1139 1121 1140 0.92

13 16 0.00084 0.094 13.4 0.8 1 23 1151 1174 1151 1174 0.94

14 16 0.002 0.23 12.2 0.1 1 23 1287 1309 1287 1309 0.93

15 16 1.5 1.7e+02 3.1 0.9 2 14 1354 1366 1353 1369 0.87

16 16 0.0026 0.29 11.8 1.7 1 23 1474 1496 1474 1496 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0003	0.034	14.8	1.4	2	22	432	452	431	455	0.90
2	16	0.00018	0.02	15.5	4.2	1	22	516	537	516	540	0.90
3	16	0.024	2.7	8.8	0.1	1	23	594	618	594	618	0.97
4	16	0.016	1.8	9.3	0.2	3	23	691	712	690	712	0.96
5	16	0.0024	0.27	11.9	4.6	1	23	746	768	746	768	0.94
6	16	3.5e-05	0.0039	17.7	0.9	2	23	777	798	776	798	0.96
7	16	0.091	10	7.0	0.5	3	21	809	827	807	828	0.91
8	16	0.00097	0.11	13.2	1.4	1	23	837	860	837	860	0.96
9	16	0.0013	0.14	12.8	2.0	2	19	893	910	892	915	0.93
10	16	0.035	3.9	8.3	0.4	3	20	955	972	953	974	0.93
11	16	7.3	8.1e+02	1.0	0.1	1	21	1091	1111	1091	1112	0.88
12	16	1.8	2e+02	2.9	0.1	3	19	1123	1139	1121	1140	0.92
13	16	0.00084	0.094	13.4	0.8	1	23	1151	1174	1151	1174	0.94
14	16	0.002	0.23	12.2	0.1	1	23	1287	1309	1287	1309	0.93
15	16	1.5	1.7e+02	3.1	0.9	2	14	1354	1366	1353	1369	0.87
16	16	0.0026	0.29	11.8	1.7	1	23	1474	1496	1474	1496	0.98

Sequence Information

Coding Sequence: ATGAGTGATCCGATCGCAAATGTTGAGGGTTTATGCAGGCTTTGTCTTAGCAATGGAGAAAATAAGTCTGTTTTTGACAGAGATGAAGGAAATCAGCAAATCACATTTATTATCAAGATCCAAGACTGTGTTTCTATAAAGatTAATAGGGATAGCGAATTGCCAACTTCTGTTTGCAAAGATTGTGAAACTTTTGTTAactcttgggttttatttaaagaaaaatgtgatAAGGctcaattatatttaaagaaatggttGAAAAATAAACAGCTGCAGATTgagGGTGAAAGATTGAAGAACAGGAACAATGAAGATGGAAAATCTGATGACTCGGAAAAGGCAAATGCTGAAGATCAACAACAGTGCGACGGAGAAATGCCGGTGGTCAGCGTGGAAGATATTGAATCAGCAATAGATCTTAAAGATGGTGGTAGTCATGAGGACAGTACCGCAGGGGCTCAGAAAATAGTCATTGCCGATGATAAATTGGACGATGaatctattattaatttagattgtGATGATAATGAGAATGAACAGCAGGCGATTTCAACAGTATTGCCAGCTGAAGATGGTAAAAACATGGATACAGTAAATAAAACTGTTGAAAATACCAAGGGGCCATCTACTGTTGAAAATGATAAACAAAAAGGCCGTGGGGAAGTTGGAAATGAAAAGAATGATAGTACAGTCATTAATGATGAAGACGACGACGAGATAAGTATATTAGAGGAGAATGTTTCTTCAACAGTAACTTCCTCAAGTAATAAAGATTCAGTCGATAATCAGTCTTCTTGTAACGCTATAAAAATAGcctcgacagtttcactttctAAAGGATTTTTTGATAGTAATTTTGATGAATTAAATAGTAAGAATAACTTAGAAAGTACTAATGAATcaattaaacaaatacaaagtaaagATGTCAATGAAAAAGTTTCTGGGAATGGTAATGATTCATCTCCTACCACTAATTTACTAGTAAATAGCGAAAAAGAAAATGCTGATGGCAATGTGACTGGGAGTGATGTAGCTGAAATAGGATCTTCAAAGAATAATGTTGCATCCAGCGAACTTACCGTACCTGATTCAACCATGACTTCACCTACTGAGCAAGATGCTATCGGTATTAAGTTGgTAACACGCATTAAAACCGAGCCTGTTGATGATCAAGAACTAAGTCAAAGTGCGGTTGGCGAGATTAGAGTGAAAACAGAACCAGAAGAATTAGTTGAAGAACATTCTGTAGCAGTTACTGAACAAGATGAAGCAGATATGGCAAATAACAAATGTACTCTATGTAATTACGTATTTTCATCAAATAACAGTTTAGTTAGGCATTTATCTTCGCGAAAACATATGAGACGTTCATTACCACCAGATGCTGAAATAAAAGTTGAACCACCAAAAACCGATCATTTATCAGCCGAAATATTACCAGATAATACTGTAAGATCAACTAggcaaaagaataaaaattttaataattttgacgGTGCTTTTACAGATGATTCGCAAGAAACGTATTTAgatgattcatttttttgtaaaatatgtaatagAAGTTATTGTTCAGCTTCAGAACTAAGAAGGCACAATAGATCTTTGAAACATATGCGAAATTTAAATATCAGAGCCGCTCTGAAGCGTAAAGCCAATAATCCGTTCTTACAAGAGCAGTTCTATGCGCTTGATGATGATGACGATGATGAAGATGATAATGTTGCTGGCACTCCAATGTACGGAACATTGCCGGGTCGTATACAAAAAGATTACATATGTCCAATGGAGGATTGTAATTTTGCTTGTAAAGAAGGTTCAGCATTATTAGAACATATGATGATACATGGTATTCGAAACAGTAATACTTCTAATGAAGAAGTAGAAAAACAAGAACCACAATCAATTCAGAAAATCTATtgcaaatgtaaacaaatatttactaataataatgaatatttatgtCACTTAAAAGTCTGCCGTTTAATGAACAAATTACCAAGTATGCCTTCCCAAATGTATGATACAACTGCAACGCCAAATTCACAACCTCAAAAAAGAGCATGCAGATTATGCGATTTAACATTTACTTCGcaagaagtttatttaaatcatttacaaatttatcaTAAAGGATCAACATTAGAGCAGAATGTACCAAAAATGAAAGTACCACTGCTTTCTGGCAAATTATGGACTCAGTTTGTTAGTAAAAGTGGAgaaatattgtataattgtattatatgtaataaaaagtttaagcaacatttttctttaaattcacaTCTAAGGCAACATAAACAACCGCCAATGAGACGTGATGTTTGTAAAATTTGCAAtaagattttttcaaatagtaaattttttgaaaaacatgtTAGAGGACACTTTTTGCCTCCGAATTCAAGAAAGTTATTCTGTTTTAAGTGTTATAAAACGTTTGATCATCGTGGTGAGATAATTGCACACAGGGCCACTTGtaattcaatgaaaatgaaaatctattctTGTAGTGTGTGTAAACATTcgtttaaagatttaattgcATTGAAAGAGCATAAACTCAGGGCCCATACGTCCTCAATTCTACCTGTACAAGCGTTATGCACGGTCGATATTAAAGAAGATCCAGTCCCAATACGAACGCCGATTGTGGTGAATGAGAACAAAGTTTGCcctatttgtaaaaaatcattttataattatcaaaacATGAAAAGACATTGCTTGGCTGTGCATAAACATGAGGACCTCTCTTTTCTTGAATATGGACCGTTTGCACATTTTGACGAACCTACCACATCGAACACACCGTCAAATATGAATGAATCACAGCTTGATCAAGACAATTGGGCATGCCAATTTTGCAGAAAGGAATTTAGAAGTGAGAAGTTATTAATCTATCATATTGAACATCAGTGCCCTTATTTACAACATgtttctaataattctttagatTTATCTATGGATAAACCGCCCAACCATAGACATAAACACAGATGCATTATTTGCGCAAGATTTTTACCTTCATATCTAAATGCATCGAACACTGTATGTGTTAGATGTATGgaaaaatttgaggaaaattctTTGTCGAAAGAAGAATTGGctaaaaaagcatttttagGAAATCAATCGTTGAAAAATGCTTTTAATTCAGCAAAACCTGCTCCATCGAGTTCAGCCTTCACTGGCGAAGGAGATATTCCACCAATGCCGTTAAAACCGCCCCCACAACTTTCCCAATCGAAAAGTGGTAAATTTTTCCAATGCCCTATTGGTAAAAAACAATTCACTACCGAAGCATGGATGATGAAGCATTTTAGAAATTGTGACGGTATGTGCCCGTCTTATATTAACTGCGCTcgttgcaatttaaattttaaaagtgtcACCATGTATGAAAAGCATGTACCAAAATGTGAAGCTGGTACAATAAAAAGATTTGATTGTTCTTTATGTGGTAAAACATACTCGAAGAGGGATTATGTGGTGAAACATAAACAGTTAGcgcataaaaaacaaataaaaaaacgaaataatgaaatagaagGTATAGAATATGTGGATTGGATGGagcaaataaattttgattcggCAACAGACCGTCGAAGGCTTTTATATCAACAACAGTTGCAACAGCAGCAATATGGCAATCAGCCGGAAGATCTGATTGAAGAAATTCCTGCTGAAGTGAAACAGGAAGCAGAGGACCATCAAGAAGATGATGAAGAAAAGCATGAAATTGATGATTCGGATCATCCGGATGAGCTTCCTCTAGAAATAATTCATACTGAAGGTGGCGATAACGTGGTCATTTCTAAGGATATTTTGGAAGATGGGTCGAAATCTTTTCCATGCGATGGCTGCTCCAGAGTTTTCAATACCTACAAAGGACTAGCTAACCATAGTGTTGTGCATAATAGAGTTAATTCAACCGACAAATCGCAATATGAGTGTAAATTTTGTCAAAGAGGCGATTTGTTACAATCGCAAATCTATTCACATACTTATAGGtgtataaaattgttattatctCAGGAGCCAGTCGTTTCTTGTAAACAATGCCAACGTAATTTCAATACTTCGCAACAGACAAAAGAATTTTCAGCAAATCTTATATCACATGTATTTGATTGTTACGACATACCATATTATAAGGATGAGGACGATGGTGGTAGAAATCCGAAGTTGTTATGTTATATTTGTTGTTACGCTTTCTCATGTCCAGATAAGTTAAGATTTCATAAAGCCGAACATGCTAGGAAAAGTCATGCtaaaagttattcaaaaaaaactaaaaggaaATTTAGACCAGACATGGAAAATAGTTTAATCGATTGTTTTTCGAATCAATCAGAATATTCCTTTGATATACAACCACCAAGGAAAATCTTTCgagattcaaaattatttaaatgtagaGTATGTAATCGACCGttttttagtataaataaactgaaaaatcatGAAAAAGTACATGGTATAATACAGAAGAATGTCTTTAGTGAAGAGCCAGCACCACCTCAAGAGGCTTGa
Protein Sequence: MSDPIANVEGLCRLCLSNGENKSVFDRDEGNQQITFIIKIQDCVSIKINRDSELPTSVCKDCETFVNSWVLFKEKCDKAQLYLKKWLKNKQLQIEGERLKNRNNEDGKSDDSEKANAEDQQQCDGEMPVVSVEDIESAIDLKDGGSHEDSTAGAQKIVIADDKLDDESIINLDCDDNENEQQAISTVLPAEDGKNMDTVNKTVENTKGPSTVENDKQKGRGEVGNEKNDSTVINDEDDDEISILEENVSSTVTSSSNKDSVDNQSSCNAIKIASTVSLSKGFFDSNFDELNSKNNLESTNESIKQIQSKDVNEKVSGNGNDSSPTTNLLVNSEKENADGNVTGSDVAEIGSSKNNVASSELTVPDSTMTSPTEQDAIGIKLVTRIKTEPVDDQELSQSAVGEIRVKTEPEELVEEHSVAVTEQDEADMANNKCTLCNYVFSSNNSLVRHLSSRKHMRRSLPPDAEIKVEPPKTDHLSAEILPDNTVRSTRQKNKNFNNFDGAFTDDSQETYLDDSFFCKICNRSYCSASELRRHNRSLKHMRNLNIRAALKRKANNPFLQEQFYALDDDDDDEDDNVAGTPMYGTLPGRIQKDYICPMEDCNFACKEGSALLEHMMIHGIRNSNTSNEEVEKQEPQSIQKIYCKCKQIFTNNNEYLCHLKVCRLMNKLPSMPSQMYDTTATPNSQPQKRACRLCDLTFTSQEVYLNHLQIYHKGSTLEQNVPKMKVPLLSGKLWTQFVSKSGEILYNCIICNKKFKQHFSLNSHLRQHKQPPMRRDVCKICNKIFSNSKFFEKHVRGHFLPPNSRKLFCFKCYKTFDHRGEIIAHRATCNSMKMKIYSCSVCKHSFKDLIALKEHKLRAHTSSILPVQALCTVDIKEDPVPIRTPIVVNENKVCPICKKSFYNYQNMKRHCLAVHKHEDLSFLEYGPFAHFDEPTTSNTPSNMNESQLDQDNWACQFCRKEFRSEKLLIYHIEHQCPYLQHVSNNSLDLSMDKPPNHRHKHRCIICARFLPSYLNASNTVCVRCMEKFEENSLSKEELAKKAFLGNQSLKNAFNSAKPAPSSSAFTGEGDIPPMPLKPPPQLSQSKSGKFFQCPIGKKQFTTEAWMMKHFRNCDGMCPSYINCARCNLNFKSVTMYEKHVPKCEAGTIKRFDCSLCGKTYSKRDYVVKHKQLAHKKQIKKRNNEIEGIEYVDWMEQINFDSATDRRRLLYQQQLQQQQYGNQPEDLIEEIPAEVKQEAEDHQEDDEEKHEIDDSDHPDELPLEIIHTEGGDNVVISKDILEDGSKSFPCDGCSRVFNTYKGLANHSVVHNRVNSTDKSQYECKFCQRGDLLQSQIYSHTYRCIKLLLSQEPVVSCKQCQRNFNTSQQTKEFSANLISHVFDCYDIPYYKDEDDGGRNPKLLCYICCYAFSCPDKLRFHKAEHARKSHAKSYSKKTKRKFRPDMENSLIDCFSNQSEYSFDIQPPRKIFRDSKLFKCRVCNRPFFSINKLKNHEKVHGIIQKNVFSEEPAPPQEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -