Basic Information

Gene Symbol
Camta1
Assembly
None
Location
HiC:1305483-1341843[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.7e-35 3.5e-31 107.5 1.5 40 116 2 76 1 76 0.97
2 3 0.21 4.2e+03 -2.4 0.2 94 115 377 398 349 409 0.68
3 3 0.29 5.8e+03 -2.8 1.1 4 72 1241 1309 1239 1314 0.74

Sequence Information

Coding Sequence
ATGTTACTGTACAGCCGGAAGAAGGTGCGATATCGGCGAGATGGCTACTGCTGGAAAAAGCGGAAAGATGGGAAAACGACCCGCGAGGATCATATGAAGTTGAAAGTGCAAGGCACCGAGTGTATTTACGGATGTTACGTCCATTCCGCCATCCTGCCTACATTCCACAGGCGGTGTTACTGGTTATTACAgAATCCTGACATAGTGCTAGTGCACTATTTAAACGTGCCGTACCCAgatgataataaaatagtttcacCTAGTCTTGCGCTTTGTGCTGATAAGAAACAATGGACTAAAGAAGAACTAGTCTCTCAGTTGAAACCGATGTtttacagCGAGGAAGAAACAGAAGTGAGTGAATTGGAGATATCTACATCAGAAACTGTAGAGACAATAGTGTGCCAGCTTTTGGAAAGGCAGCGTAGTGCTCGGACCGCAGCCATATGCAAACAGTTGGAATGTGGATGTCCTGATTCTACGTGTGCGGACGCAAAAACTTGTAGTCAGCCTATTAGGAGAATAACTTCCGCCAAAGCTGAACCTAGTTCCGACAGTAACCAGGTATCTTCGACTACAGGATCTGGTATGGTGGTCGGCCAAAGGAGTGGCGGTATGTTGCATTCCGGCAATGAGAGATCTCTTCCTGTACATCATCTGCACGCTGCACACCACCAACTACCTCATGGCTCCAACGCTCAGACATGTGGGGCAACAAATGGAGGCAGTGGAACGCCGTTAGTACTTAGTTTATCTCAGCTTCAAGCACCGGGAAGTTTACTTATACTTAATTCAAATCAGTCGAACAACGGAAGTCACGTAGCATCTTTAGTAGCAGCATCACAAAGACATTGCACTCGCAAAGATAAACATCACGATCCCCCAATGGAATTAGAAAACAGCCATTGTCAAATCTCTCAGCCAGTAGCAGCACAAATGAGAGGTCCACCAGCGTTATTGCCCCATCAACAACAGCAAGCAAACAACAGTACTGGCAACGGTAATAGCATCAATTCTTCCGCCAACAACAGTAATAACAGCAATGGTAACAAcagcaacaataacaataacaaccacagtaatattaataacaataataatagaaatgccGAACATGATAAGGGTGATAAATACAGAAGAAAATCGAAAGTCCTGAATCAACCTCAACACCATCAACAGGTGAAGTATATGACAACACAGAGCACTCAGCACCAGCATCAACAACACCAGCAACTCCACTTGAAGGATATTGGCTCTTCAGAATATTATGAAACGTTAGACCTTTCACAAGAAGATATACAACAAACTCTGTCCGCCAATATGCCGCTTTCTTGCACTGCTAATCATAACAGAGAATCGAGGGAGGACGATTGTAAGCAATCTTCTGATTTGCCAAGTCTTGAAATTGATTTTATCGACGTAAATGCAATCAAACATGTGGATGATGATGTGTTCGTCAATTTGGATGCATTTGATATGTTATCAGAGTTTCCTGACCTTGAAGGACTTGAACATAGTCATAAtgGTAACAATCTAGGTGATGCTGTTGTTAGCGGCAGTGGTCAAGTTTCTGGTGAAGTTATGGACACAGAAAAGGGCAATGAAGGTTCACCTCCCAGAATGGATTATCGAGAGGGTACTGCTAATATTACGGATTACTCACCTGAGTGGGCATATACTGAGGGAGGTGTAAAAGTGTTGGTGACGGGCCCATGGTACTCTACGACTTCTCCATATACTGTGCTCTTCGACTCCTGTCCTGTACCTACCACACTTGTTCAGAGTGGTGTACTTAGATGCTTCTGCCCAGCCCATGAGGCAGGAGTGGTCTCCTTACAGGTAGCCTGTGAAGGTTTTGTCATTTCCAATTCGGCGGTATTTGAATACAAACGTGGGCCTCCAGGTAACGAAGACAGAGTACAGGAAGTAAGTGCCAGAGATGTTCGGCCACATGACAGTCTCCTTAGGTTCACACTTATGCAGCGTCTGGATGCCTTCGACAGTCAATTAGATATAAAACAAGAACCTCAAGATGTGGCTGAGAACAGTTCTTTACTGAGTCAAGCAAACTTTGAAGATAAGCTGATGGGTACTGTGACAAGATTGTCAAAAGGCAAGTGGTGGGAGAAACAAATGCCTGATATTACAGTGGAATGGTGTCATTCTTACAAAGGCATGACGCTGTTGCACCTGGCTGCTTCACTCGGATATTCCAGgctggcctGTTCTTTGATTCAGTGGCGAACTGAGAGTCCATCCTCGATATTAGAGTTGGAAGTGGACGGCTTAAATCAAGACGCCGACGGATTCACTCCACTaATGCGTGCTTGTGAAAGGGGTCAAAGTGAAACAGTGCGATTGCTCTATGAATGGTTACCTGCTTGCGCTTCTCTAGTGAATAACCTCGGGGAGACTGCTGTAGACATTGCAAAGAATTGTTCACATCTCACTCTCGCTAAGGAGCTTGCAGAAAGGATCGAGAAATCAACCACACTGATGGCCAATAATAATGgGGCAAGCTCCAGGGAGAATGATAGTCAGGGAAGAGATGCAGATAGCCTGGATGAAGCGCGCACCTCTCTCGACTGTCTTACCACTATTCGGGATGCCGGACTCTTTCTTCATCCCAGTTCCATTAACACCAGGTGCGAGTACTCTACTATGGAGCTACATGTAAACATTCCCCAGTGGGGCGAAAACCACACATCACTGACCAGCAGAACATCCTCTCCCAGTCCTACCGCGGCCACAGATGGTTCTAATGTGAGTAAATGCCTTGTCGGTGAAAGATTAGTGAAAAGACCTTCAGTAGATAGTGGTATCCAATTGCAATCTTCAGTTGACAGTTTAACATCCGTTCGTGTTAGCAAACATAATAAACATACTGATCCTCCAAAACTTTCTAGGTTTGATCGAAGCATGTCTTTACCACTCACTAGCCAGTCTGTTGATTCTGGTTATGAGACGAACTTGGACAATCGGCATAACTCACCTGTACGGAGAATGGATTTTGCACTTTGTCAAGTGCGGCGAGACGGTACACCTCCCAGCCCTGGAGGTCTGATGCTCATCGCTTCCGAGCAACAATCAACTGCTTCAGTTGGTGAACAAGATGTTCGCGTTTTAACGTTAGCCGAACAAATAATAGCTGCCATGCCAGAAAGAATAAAGAATGAAAGTGAAGGAGGGGAGATGATGCTGTTGAGTTCTGATGAGATGGAGGTGATGTCTTTGGAATCACCTCTACTTTTGGAGGAACCGCCTTCTTCATCAAGTTCCTGCTGCTTTGATACCagttcagaatttaattttgatcacAATTATAGATACTATGATGTCGGCACTCCTTGCTCTAGCCTCAGCCCCGGAAGTTGTCTTCCTTCGCCACCATTTCCGCTTCATCGCTCTCCTTCGCCACAGCCCACAACAGCTGATTTCTGTGAATTCTTACACGCTTCTAATTccacatattttgaaaaagatttttcaaatcTTACACTTTCTGACAGGGAGCAAAGAGAGTTGTACGAAGCCGCCAAAGTAATCCAGAAAGCCTATCGTAGTtataaaggaagaaagaaattaGAACAGGACAAGGAGAGGCAAGCTGCCATTTTGATCCAAAATTATTACAGGCGATACAAACAGTACGCTTACTTTAAGCAGATGACCAGAGCTGCAATGGTAATACAAAATGGGTACAGATCTTATTGTGAAAATAAGAGATTCAAGAAAAACCAAGAAGCGGCTGTAAGGGTGCAGAACTGTTACAGAAACTTCAGAGAACAAACTGATCCAGCTACAGCAGCTCCTTCCACTGGATTGAAGAGAACCTATTCTCAGAGGAGACAACATCAGGCTGCCAGGAAAATTCAACAATTTATGAGACAGTCGAAAAACAAATTGCAGAGAGAACGAGCCGAAAAAGAGAGGCAGGGCCCATGCAAGGTGTCCCTTCAAAACTAG
Protein Sequence
MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKIVSPSLALCADKKQWTKEELVSQLKPMFYSEEETEVSELEISTSETVETIVCQLLERQRSARTAAICKQLECGCPDSTCADAKTCSQPIRRITSAKAEPSSDSNQVSSTTGSGMVVGQRSGGMLHSGNERSLPVHHLHAAHHQLPHGSNAQTCGATNGGSGTPLVLSLSQLQAPGSLLILNSNQSNNGSHVASLVAASQRHCTRKDKHHDPPMELENSHCQISQPVAAQMRGPPALLPHQQQQANNSTGNGNSINSSANNSNNSNGNNSNNNNNNHSNINNNNNRNAEHDKGDKYRRKSKVLNQPQHHQQVKYMTTQSTQHQHQQHQQLHLKDIGSSEYYETLDLSQEDIQQTLSANMPLSCTANHNRESREDDCKQSSDLPSLEIDFIDVNAIKHVDDDVFVNLDAFDMLSEFPDLEGLEHSHNGNNLGDAVVSGSGQVSGEVMDTEKGNEGSPPRMDYREGTANITDYSPEWAYTEGGVKVLVTGPWYSTTSPYTVLFDSCPVPTTLVQSGVLRCFCPAHEAGVVSLQVACEGFVISNSAVFEYKRGPPGNEDRVQEVSARDVRPHDSLLRFTLMQRLDAFDSQLDIKQEPQDVAENSSLLSQANFEDKLMGTVTRLSKGKWWEKQMPDITVEWCHSYKGMTLLHLAASLGYSRLACSLIQWRTESPSSILELEVDGLNQDADGFTPLMRACERGQSETVRLLYEWLPACASLVNNLGETAVDIAKNCSHLTLAKELAERIEKSTTLMANNNGASSRENDSQGRDADSLDEARTSLDCLTTIRDAGLFLHPSSINTRCEYSTMELHVNIPQWGENHTSLTSRTSSPSPTAATDGSNVSKCLVGERLVKRPSVDSGIQLQSSVDSLTSVRVSKHNKHTDPPKLSRFDRSMSLPLTSQSVDSGYETNLDNRHNSPVRRMDFALCQVRRDGTPPSPGGLMLIASEQQSTASVGEQDVRVLTLAEQIIAAMPERIKNESEGGEMMLLSSDEMEVMSLESPLLLEEPPSSSSSCCFDTSSEFNFDHNYRYYDVGTPCSSLSPGSCLPSPPFPLHRSPSPQPTTADFCEFLHASNSTYFEKDFSNLTLSDREQRELYEAAKVIQKAYRSYKGRKKLEQDKERQAAILIQNYYRRYKQYAYFKQMTRAAMVIQNGYRSYCENKRFKKNQEAAVRVQNCYRNFREQTDPATAAPSTGLKRTYSQRRQHQAARKIQQFMRQSKNKLQRERAEKERQGPCKVSLQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-