Rpro001399.1
Basic Information
- Insect
- Rhodnius prolixus
- Gene Symbol
- SMARCC2
- Assembly
- None
- Location
- HiC:898236-909368[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-15 5.4e-12 45.8 0.2 3 44 622 663 620 665 0.95
Sequence Information
- Coding Sequence
- ATGTTAGCATTTGGTCCCAAAAAGGATGGTGGGCCAAACGTTAAGTTTTTTGAATCACCAGAAACATTAGCACTATTTGATGGAATTAAGAATTGGTTACAGAAAAACTGTAAAAAGTGGATACAAACCGATCCACCAACTAGCAAAGGACTCTCAGCGTTAGTTATACAGCTAATACAATTTCAAGAAGACAACTTTGGTAAAAATGTCACTAAACCTCCTCTTACCAGACTTCCGaTGCGGTGCTTCTTGGACTTCAAGCCCGGCGGCGCTTTGTGTCATATTCTTGCTACagtatacaaatataaaagcgAACAGGGCTGGAGACGGTTCGACTTTCAGAGCCCTTCACGGATGGACCGTAATGTTGAGATGTTTATGGCGGTGGAAAGGGCATTGATTCAGGCAAAATGTCTAACTCTGCCAGTAGTGTACATCAGACCTGATGTTGACAAGCCGACTGTCGCCAAAGTTAAGGATATTGTCAAAAGACATCAGGGTACAATTGTTGAAAATGAAGAACAAGCTACACATATCCTCTATCCAGTGGTAGATCCTCTTGATGAAGAATTTGCTAGGCCAACTTTAAAACGTGACAGAATGACATTGCTACATTGGTACTATTTCCCCGATTCCCATGATTCTTGGGTATCTATTGATTTACCAGTCGATCCTCCGGATTCCCCACCGCCTCACAGTCTTCCTTGGaggGTATCAGCGTCCTGGGTCCTAGAACTGGAGCGCATGAATGAGTGGATGAATGAAGAAGATTACGAAGTAGACGAGGCTGGAAAGAAAAAAGTGCACAGGCTACGACTGTCCGTCGACGATCTAATGGCTCAGACAGATCCGACTATTAAGAAGAAACAGAAACGGAAACGTTCACCGTCACCGCCTCCTAAATTAAACAAACGGAAGagCGGTCGTGGACCGGCGATTGGACCGAAGAAGATCAAAAGTGAAGAGGAAGAGAATGATCTGACAAGAGACATGGAGGAGCCTACTCCTGAGCCCAATATACAGGAAGTTCCTATACCTAAACCTGGAGTTACACCAAATAAAAAAGACAGCGAAAATCAGCCAGTAAAAAGTGGTACGATGATGGATTTAGATGAAGAAGCCGCGGATAGAGGGGAAGATAGTCAGATGGGAAAAGTTTCTGACACAAATACACAGGACATCGCAATAAAGGAAGATGGACAAGAAGACAATGTTACGGAGCAGACACACCATATAATTGTGCCTTCGTATTCTGCATGGTTTGATTACAACTCTATACATTCTATAGAGAAAAGAGCTTTACCAGAATTTTTCAAtggcaaaaataaatcaaaaacacCAGAAATCTATGTGGCATATAGAAATTTTATGATAGACACCTACCGATTGAATCCAACAGAATATCTGACGAGTACAGCATCCAGAAGGAATCTAGCTGGTGACGTGTGCGCCATCATGAGGGTGCACGCTTTCTTAGAACAGTGGGGACTCATCAATTATCAGGTTGATGCAGACAGTAGACCTACACCTATGGGACCTCCGCCGACATCACACTTCCATGTGCTTGCCGACACACCATCTGGATTGATGCCAGTAAATCCGCCAAAAACCCAACAACAATCCGCTGCGAAAACCTTGCTGGACATGGACAGCAGAAAGACGGATACACCGTCTCAACAGCAAGCTCAGCCTCAAACTCAGCCACAGCAACCTCAACCGCAACAACAACAAACGCAGCAACAGCAACCGCCGCAAGTTAAAAAGGATCCTGATACTCCTGGCATGAATTTTGGTTTGAAGTTGGATCAgTACGCACGAAAGCCAGCAGCTTTGAAAAACAAACAAGCAGCTTCTGTAACTCGAGACTGGACTGAACAGGAGACATTGCTTCTGTTGGAAGCGCTGGAATTGTATAAAGATGACTGGAACAAAGTATGCGAACATGTGGGCTCTAGGACGCAAGATGAATGTATACTACATTTCTTGAGGCTCCCCATCGAGGATCCGTATCTAGAAGATCACGAAGCAGGAGGAGCTTTAGGACCTTTGGCGTATCAACCAATACCATTTTCAAAAGCTGGAAATCCAATCATGTCAACTGTGGCTTTCCTAGCTTCAGTTGTTGATCCCAGAGTGGCGGCTTCCGCTGCAAAAGCAGCTATGGTTGAATTCGCTAATATAAGGgaTGAAGTGCCCGCAGCATTGTTGGACGCGCATATTAAACATGTTGAAGCTTCCACCGCTGATGGAAAATATGATCCTTCTGCAGGTTTAGttcagAGTGGCATAGCTGGTACCCAGCCAGAGAAAGAAGAAAGCGAAGACAAAGAGAAGAAGGAAGTTGGCAGCGAAGGTGAAGGCAGTACTGGAGACAGCGCGGTCAAGACTGAAGCGGCCGCTGCTGCACCTGGAAGCACGGCTGGTGGCCCAAGCAGTACAGAAGTCAAAAATGAAGACATGGGACCACAGCAAAGCAACAATACATCTTCTACAGGTGCCGCTGCGGTCACCAAGACAGAAGGCAGTGAGCCTATGGAAACTGAGGATGCTGGTAAGAAGGAAGAGGCGCCCGAAGATGCAGAACGAGAGCGAGTGGTGAAAGATGCTCAGCTGCAGTCTGCAGCCGCGGCAGCTTTAGCAGCTGCAGCTGTAAAGGCTAAACATTTAGCTGCAGTTGAAGAGAGGAAAATCAAATCATTAGTTGCGTTACTGGTGGAAACACAGATGAAAAAATTAGAGATCAAATTAAGACATTTTGAAGAATTGGAAACTACAATGGAAAAAGAGCGTGAAGGATTGGAATATCAGCGGCAACAGTTGATCGCTGAAAGGCAACAGTTTCATTTGGAACAGTTAAAAGCGGCAGAATTCAGGGCTAGACAGGAAGCGCATAGGAGACTGGCCGCTGAACAGGCGACAGCAATACCGCCTGCATCGccccaacaacaacaacagcaacagccTCAACAGACGTTACCTACGCAACAACAACCGTCGCAACAACCGCAGCCTCAGCAACAGCAAATTCCACCCTCGCAATTGCCTCCACCTCCACCTCCTTCGGCTACTGTACAGTGA
- Protein Sequence
- MLAFGPKKDGGPNVKFFESPETLALFDGIKNWLQKNCKKWIQTDPPTSKGLSALVIQLIQFQEDNFGKNVTKPPLTRLPMRCFLDFKPGGALCHILATVYKYKSEQGWRRFDFQSPSRMDRNVEMFMAVERALIQAKCLTLPVVYIRPDVDKPTVAKVKDIVKRHQGTIVENEEQATHILYPVVDPLDEEFARPTLKRDRMTLLHWYYFPDSHDSWVSIDLPVDPPDSPPPHSLPWRVSASWVLELERMNEWMNEEDYEVDEAGKKKVHRLRLSVDDLMAQTDPTIKKKQKRKRSPSPPPKLNKRKSGRGPAIGPKKIKSEEEENDLTRDMEEPTPEPNIQEVPIPKPGVTPNKKDSENQPVKSGTMMDLDEEAADRGEDSQMGKVSDTNTQDIAIKEDGQEDNVTEQTHHIIVPSYSAWFDYNSIHSIEKRALPEFFNGKNKSKTPEIYVAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTPMGPPPTSHFHVLADTPSGLMPVNPPKTQQQSAAKTLLDMDSRKTDTPSQQQAQPQTQPQQPQPQQQQTQQQQPPQVKKDPDTPGMNFGLKLDQYARKPAALKNKQAASVTRDWTEQETLLLLEALELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRVAASAAKAAMVEFANIRDEVPAALLDAHIKHVEASTADGKYDPSAGLVQSGIAGTQPEKEESEDKEKKEVGSEGEGSTGDSAVKTEAAAAAPGSTAGGPSSTEVKNEDMGPQQSNNTSSTGAAAVTKTEGSEPMETEDAGKKEEAPEDAERERVVKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQLIAERQQFHLEQLKAAEFRARQEAHRRLAAEQATAIPPASPQQQQQQQPQQTLPTQQQPSQQPQPQQQQIPPSQLPPPPPPSATVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01479370; iTF_01478767;
- 90% Identity
- iTF_01479370;
- 80% Identity
- -