Basic Information

Gene Symbol
BAS1
Assembly
None
Location
HiC:27262337-27267074[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.87 1.1e+03 -0.0 0.0 12 39 257 286 254 287 0.84
2 6 0.97 1.2e+03 -0.2 0.1 22 45 542 567 539 568 0.80
3 6 3.1e-06 0.0039 17.4 0.0 2 36 575 611 574 614 0.91
4 6 3.7e-09 4.7e-06 26.8 0.2 2 44 630 676 629 678 0.95
5 6 5.4e-10 6.7e-07 29.5 0.0 1 42 683 724 683 728 0.97
6 6 2.9e-17 3.7e-14 52.7 0.1 2 45 737 781 736 782 0.96

Sequence Information

Coding Sequence
ATGAATCTTTCTAAATTAGTTGATATCGAGGaggaagtaattaattttttacaaagaacaaaaaataaagctgATAAATCTTTAATCAACGAAttaaatgaaatggaaaattgTTCTAATCAAGAAATAGAAGATGAAAGATTGTTTTCGCATTCAATTATACAAGATGAAACCAATAAggaatcaataaaaatgaaacattctAAGAAAATAGACTGTATATGCTCTGATCCAAGGAATTTCAAAAGAATTCAAAACTTGAATACTACAGACAGCGATACCTGGACGAATGGAACAGGTTTGGAAAATTCTATAGGCACTCCATCTAATAGTgataattgtaactttgatcaaGGTATAGACATAACTAATAAGAGTAATTTTGAAACGAGAAGCAGTTATAGTACTGGATATAACatgcataaaaaaaatacttatttaggAAGAAATAATGTATTGTGGAATTTATTCGAAATAAATAATGTCTTCGAAGAAACAAGTGCTAATCCACAAtcagataaaattaataaccaaTCTGTTGACAgagattatttacaaaaagattGTTTTGAAAGAAATGATTTACAAAACACAAGAAAGTTTGTATGTTCTCAATCTAAGAAATCATGtagcattaatattaaaaataaaatcaacattcATCGGTATTTTAATGATGTATCTGTTTTGCCAGAAATACCATATTCCTCGCattggataaaagaaaaaaatggaacgaATAGTCCTGGAGtgtcaaatgaaataaattttagagaatACATAAATTCTGAATCATCTGGGGATTATGATACTGTGGCAATGTATTACAATAGTTCTAAGGAAAGCAATAGTTGCTATTCAAGTcctaaattaagtaaatttcagAGAGAAAATGACCAAGATACAAGTTCAATTCCAAGTAATGATAGCGATAAGGAAGGTGATGCTATAGAAGAGATTATCATTAGAGAAAAGCTAAACAGAATGAACAATCCATCTTTAGATGATAGCTTTAATGAGGTGGCTGATGACGTTCTTTATGAATCTAATTCAACACTACAAAAtaagattaaagagaaaaatgagCTATTGATATTGGCCAATAAATTGTCCGAAGCAATAGAATATAATACTTCCATGAGAAATTATTTATACGAACTAGAACATACGCTTTTAGGACTAGTAAAAGGAACAAACAGTGATAGTGCAACAaaagttataaagaaaaatgccaagtcatataaaaaaaaaaagttttattataattttcaagcaccctattttaaagataaacgtGGGATCAGTTGTGCACCTTATGTTGATGAAAGTATAAgatcagaaaatgaaaaagattgtACAGAAGATTATATGAGATTATACAGGATATCACAACAACCAGAAATTTGTGAAATCTATAATGCAATAAAGAGGTACTTTATAGAAACCTATGATCTGAAAACTGtagaaaacaaacagaaaactaACAAACGGAGAGGAcggaaaaaagttttatttgataGCGAATACTGTGAAAGTGATTTATACTCCATGGAATCACATTTTGATAATTTCTTATCAACTTTTAATCCAttagatttaaaagtattttttgacaaacaaatagattggcaaaaagtTTCTAGTATGCCTAATTTACATGGTATGTCAGCTAAGGAATGCCATCAAATGTGGACAATGGTATTAAAACCACTAGTAGAATTAGGTAGTTGGAGTAATAAAGAAAGTAAACAGGTATTGAAAATTGCACGAACTTACAATTACCAACTTTGGGATGAAATAGCCAAAGAATTGGGTACTGGTAGATCTGGCTATCTTTGTTTCTGTCATGTTTTGAGCAAACCAATTATAGGTTTAACACAAAATACTGGTGCTTGGACTAAAGAAGAGGATGATTATTTGCtttcattaattgaaaaatgtcgttatattaattcaattatgtGGGGTCGAATATTTTACTACTTTGAAGATCGTACTGTCACTCAAGTGTTAAATAGATGGTACCGATTAAATCCTGCTTTGAAGCGAGGTAAATTCACACATAATGAAGATATTATGTTAATGTATTGCGTTGAACAATTTGGAAGGGATTTTGGTAAAATTGCTACCTTATTTGGTAATCGTAGCCCAATACAATTGCGTGAAAGATATTTCGCTATTAAAGATCTAATTGATGAAACGAAATTAGGCGAATGGTCTGTGGAAGAGGACAAATTATTACTGAATTTAGTAGAAGAATATGGTGAATCAAAATGGGCAGAAATTGCTGCTGAATTTCCTGGAAGAAATCGAACACAAATTCGACATCGTTACACATCTGTATTGAAACGATGGATGGCTAATCCAACGTTTCAGTTAGAGTCATTAAAACGTCATAAACGAACTACACATATTAAATCTgtaaacagaattaaaaaaatagatacagCAGAAACTGATGTCCGAacttttgttgaaaataaactaaaaaccgGGAAAGTTACCTTAAAGAGGGGCAAAAGGGCTGGGAAACTTCCATTAATTACCCTAAACAATTAA
Protein Sequence
MNLSKLVDIEEEVINFLQRTKNKADKSLINELNEMENCSNQEIEDERLFSHSIIQDETNKESIKMKHSKKIDCICSDPRNFKRIQNLNTTDSDTWTNGTGLENSIGTPSNSDNCNFDQGIDITNKSNFETRSSYSTGYNMHKKNTYLGRNNVLWNLFEINNVFEETSANPQSDKINNQSVDRDYLQKDCFERNDLQNTRKFVCSQSKKSCSINIKNKINIHRYFNDVSVLPEIPYSSHWIKEKNGTNSPGVSNEINFREYINSESSGDYDTVAMYYNSSKESNSCYSSPKLSKFQRENDQDTSSIPSNDSDKEGDAIEEIIIREKLNRMNNPSLDDSFNEVADDVLYESNSTLQNKIKEKNELLILANKLSEAIEYNTSMRNYLYELEHTLLGLVKGTNSDSATKVIKKNAKSYKKKKFYYNFQAPYFKDKRGISCAPYVDESIRSENEKDCTEDYMRLYRISQQPEICEIYNAIKRYFIETYDLKTVENKQKTNKRRGRKKVLFDSEYCESDLYSMESHFDNFLSTFNPLDLKVFFDKQIDWQKVSSMPNLHGMSAKECHQMWTMVLKPLVELGSWSNKESKQVLKIARTYNYQLWDEIAKELGTGRSGYLCFCHVLSKPIIGLTQNTGAWTKEEDDYLLSLIEKCRYINSIMWGRIFYYFEDRTVTQVLNRWYRLNPALKRGKFTHNEDIMLMYCVEQFGRDFGKIATLFGNRSPIQLRERYFAIKDLIDETKLGEWSVEEDKLLLNLVEEYGESKWAEIAAEFPGRNRTQIRHRYTSVLKRWMANPTFQLESLKRHKRTTHIKSVNRIKKIDTAETDVRTFVENKLKTGKVTLKRGKRAGKLPLITLNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-