Rpro016166.1
Basic Information
- Insect
- Rhodnius prolixus
- Gene Symbol
- -
- Assembly
- None
- Location
- HiC:3013-4935[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-08 8e-05 22.4 0.1 4 39 17 55 15 59 0.91
Sequence Information
- Coding Sequence
- ATGCCACGCAGTAAAAAAGGCAGGAAAAGGCCCCCTGTTAATTCTAATGCCATTGAAGAAGCCGTGGCCGCTGTTACAACTaattctgaaaacaaaatttcattgagAGAAGCatgcaaaatttataaaatgtctCTCGCCACTTTATCAAgacatttaaaagtttttaaagaatctagGGCTGAAAATTTTAAGTATCCTGCTAATTGTACTGTAAAACGTGTTTTCGATGACACGGAAGAGTTTACTCTGGTTGACTATATAAAGACAATAGCCAAAATGCAGTATGGGCTCTCAAAGAAAGGTGTGAGGGAGTTAGCTTACGAATACGCTGTAGCGGATTCATGA
- Protein Sequence
- MPRSKKGRKRPPVNSNAIEEAVAAVTTNSENKISLREACKIYKMSLATLSRHLKVFKESRAENFKYPANCTVKRVFDDTEEFTLVDYIKTIAKMQYGLSKKGVRELAYEYAVADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01301558;
- 90% Identity
- iTF_01301558; iTF_01301561;
- 80% Identity
- -