Rros014336.1
Basic Information
- Insect
- Rhingia rostrata
- Gene Symbol
- GATA6
- Assembly
- GCA_949824845.1
- Location
- OX463756.1:130834248-130844014[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.069 3.5e+02 1.6 0.7 10 26 434 449 422 451 0.80 2 2 2.7e-17 1.3e-13 51.0 5.1 1 34 482 514 482 516 0.97
Sequence Information
- Coding Sequence
- ATGGAAggtcagcagcagcagcaacagcaacaacttCAGCAACAGCAAAAGCCCATCGAGTTGATAACTGAAATTAAAACGGAGCCCATTAGCGAACAAGTGCCTTCGCGTACTCCAACAATTGAagagcagcaacaacagcaacaacagcagcaacagcaacaacagcaacagcaacaacagcaacaacagcagcagcagcagcagcagcaacaacagcagcagcagcatcagcaagatcaacagcagcaacaacaacagcaacaacaacagcaacaacacttgcagcaacaacatcaacaacatcTCCAGCTGGAACATCAGCATCAACAACAGCAACGCAAGGATACACCTTTGAATGTATCTAGACTCCTAATCGATCAATCGTCAGGACCAATTGTACGGCCACAACAGAGACGCATTCTGACAACCGCTGGAACTTTGAGAGAAGTCAACGATACTGTGCGAGAAACAGACCCCGATTCAGACTACAACAGTCACCAACACTCTCCGTCGGAATTCGTTCAAATGACGCCTCGACCTGAAGAACCTACAACCGTTTACGCTTATGAGAGCACTCCGACAGGAACTACTCTCATCGCTTGCGAGAATCCAACAATTAAAATCGAATCCCTTGACAAGGAGCAACAACAACACCTGCAGCAACAATCCGATCAGCCACCGACTAACACAACATCCGTATACCCCGAAGGAACTGTCGTTTCCGCAGAAGCACTTCAAAATCACCATACCCAGCACCCGCAACACCACACCACGCTGCGTGTCTACGAGGACGAACGCTTTCCGGCGGGCATCGAAAACGGTGATCAAACTCAAAtaattttctacgaaaattcaCTGAATGACGCCACTGTTGTCGATCCACACAATGAGGCGAAAACCTTCACAAACCTTGGCCCAGCTGCGGGTAGTCTTCCCACCTCCGGCTCCGAATACTCAGTCTCCAGCAATTACAGTTCCAACAGCACATATGGCCTGGCCCCGACCTACAACATGTCCAATACCAATCCGCTACTGTACAAATCTGATCCGACTTTGAGTTCGATTCGGCCGAATAGTCAATTCCCGCTTACCGTTTACGAGAACCCCAGTGTATCCGAATCCTATTGGGCCAACTCAGCCTCCATGGAGTTCTCCAACATTGCTCCCTTCAATGCGGTGATTGCCGATGAATACGGTTCATCAAATGGCAACTCATGGGTGCAGTCTGCCGGAGGCACCACCACTACGATCGCCTATGATCCAAGTGGAGGCGATACCAAGTGCCAATACTGTGGCAGCCAGCTGATAAGAAAGGAAAACAACGAAATCATATGTGCCGCATGCTCTTCTTCGCGTATGTCCTTTGCACCGCGAATACAACCGCGTCAGACCAAGCCGAAGACGACCACTGCGAACAACAATCGCAGGAATGGAGTTAGCTGCGCGAATTGCTTCACCACCTCGACCACGTTGTGGCGGCGCAACAACGAGAGTCAACCGGTTTGCAATGCATGCGGATTGTACTTCAAGTTGCACAACATGAATCGGCCGCTTACCATGAAGAAGGAGGGCATCCAGAAGAGGAAACGCAAGCCGAAACTGGCGAATGGAGCACCGATGAGGAACCCCCTACCAAGTATGATTGTCACCCCCCATCATGCCATATATCCGTCACAGGTTCAAAACATCGGACTACCAATGGTCTCCACGCATGAACTGCACGACATGTCAAATCCCGGCACCAATGGCACCAATCGCATCAGCATCAGTCATAATGATGTCAATTCAATAAATGTCAGTCGTCATCATTTGACATCAGAAGTACCAACATCAGCTGTAGAAAATCATCCCACGCAATACAACTGTCAGTCACCGTGTCAGTCGCCACATTTGCCAAATTCCAGCACTCTAAATCGTCAAATTACACAAACAGTTCCACCAATAGATGGCAGTCGTTCAGTGAATGGCGAGATAACAACGAGTGTCATAACTAGTACTGGCATTCCGGAGAGATCCTCGAATAATTAA
- Protein Sequence
- MEGQQQQQQQQLQQQQKPIELITEIKTEPISEQVPSRTPTIEEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQDQQQQQQQQQQQQQHLQQQHQQHLQLEHQHQQQQRKDTPLNVSRLLIDQSSGPIVRPQQRRILTTAGTLREVNDTVRETDPDSDYNSHQHSPSEFVQMTPRPEEPTTVYAYESTPTGTTLIACENPTIKIESLDKEQQQHLQQQSDQPPTNTTSVYPEGTVVSAEALQNHHTQHPQHHTTLRVYEDERFPAGIENGDQTQIIFYENSLNDATVVDPHNEAKTFTNLGPAAGSLPTSGSEYSVSSNYSSNSTYGLAPTYNMSNTNPLLYKSDPTLSSIRPNSQFPLTVYENPSVSESYWANSASMEFSNIAPFNAVIADEYGSSNGNSWVQSAGGTTTTIAYDPSGGDTKCQYCGSQLIRKENNEIICAACSSSRMSFAPRIQPRQTKPKTTTANNNRRNGVSCANCFTTSTTLWRRNNESQPVCNACGLYFKLHNMNRPLTMKKEGIQKRKRKPKLANGAPMRNPLPSMIVTPHHAIYPSQVQNIGLPMVSTHELHDMSNPGTNGTNRISISHNDVNSINVSRHHLTSEVPTSAVENHPTQYNCQSPCQSPHLPNSSTLNRQITQTVPPIDGSRSVNGEITTSVITSTGIPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314811;
- 90% Identity
- -
- 80% Identity
- -