Basic Information

Insect: Rhingia rostrata
Gene Symbol: ZFX_1
Assembly: GCA_949824845.1
Location: OX463756.1:138268104-138303004[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 8.7e-05 0.011 16.9 2.7 1 23 225 247 225 247 0.98

2 18 0.01 1.3 10.4 1.3 2 23 256 278 256 278 0.96

3 18 3.2e-08 4e-06 27.7 1.1 2 23 298 319 298 319 0.98

4 18 8e-07 0.0001 23.3 1.0 1 23 325 347 325 347 0.98

5 18 1e-07 1.3e-05 26.1 0.2 1 23 353 375 353 375 0.99

6 18 8e-06 0.001 20.1 2.5 1 23 381 403 381 403 0.97

7 18 1.4e-06 0.00018 22.5 3.2 1 23 409 431 409 431 0.99

8 18 2.7e-05 0.0034 18.5 0.9 1 23 437 459 437 459 0.98

9 18 0.031 4 8.8 0.3 2 23 768 790 767 790 0.93

10 18 0.00038 0.048 14.9 0.4 2 23 800 822 799 822 0.95

11 18 0.056 7.1 8.0 1.2 3 23 830 851 828 851 0.95

12 18 0.55 70 4.9 3.0 3 20 862 879 861 882 0.92

13 18 4.3e-05 0.0054 17.8 1.8 1 23 891 913 891 913 0.97

14 18 5.5e-07 7e-05 23.8 0.7 1 23 919 941 919 941 0.98

15 18 6.1e-06 0.00077 20.5 2.7 1 23 947 969 947 969 0.98

16 18 5.3e-07 6.7e-05 23.8 0.5 1 23 975 997 975 997 0.98

17 18 0.00019 0.024 15.8 4.8 1 23 1003 1025 1003 1025 0.98

18 18 7.7e-05 0.0097 17.0 5.2 1 23 1031 1054 1031 1054 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	8.7e-05	0.011	16.9	2.7	1	23	225	247	225	247	0.98
2	18	0.01	1.3	10.4	1.3	2	23	256	278	256	278	0.96
3	18	3.2e-08	4e-06	27.7	1.1	2	23	298	319	298	319	0.98
4	18	8e-07	0.0001	23.3	1.0	1	23	325	347	325	347	0.98
5	18	1e-07	1.3e-05	26.1	0.2	1	23	353	375	353	375	0.99
6	18	8e-06	0.001	20.1	2.5	1	23	381	403	381	403	0.97
7	18	1.4e-06	0.00018	22.5	3.2	1	23	409	431	409	431	0.99
8	18	2.7e-05	0.0034	18.5	0.9	1	23	437	459	437	459	0.98
9	18	0.031	4	8.8	0.3	2	23	768	790	767	790	0.93
10	18	0.00038	0.048	14.9	0.4	2	23	800	822	799	822	0.95
11	18	0.056	7.1	8.0	1.2	3	23	830	851	828	851	0.95
12	18	0.55	70	4.9	3.0	3	20	862	879	861	882	0.92
13	18	4.3e-05	0.0054	17.8	1.8	1	23	891	913	891	913	0.97
14	18	5.5e-07	7e-05	23.8	0.7	1	23	919	941	919	941	0.98
15	18	6.1e-06	0.00077	20.5	2.7	1	23	947	969	947	969	0.98
16	18	5.3e-07	6.7e-05	23.8	0.5	1	23	975	997	975	997	0.98
17	18	0.00019	0.024	15.8	4.8	1	23	1003	1025	1003	1025	0.98
18	18	7.7e-05	0.0097	17.0	5.2	1	23	1031	1054	1031	1054	0.98

Sequence Information

Coding Sequence: atgaataataaaactTACACAGATCTAACATGTCGGGTGTGTCTAAATGTCGAGGAGTTGATGGTGAATATCTACGAGGAAGTGGAAGATTTGCAATCGAACTTGGTCGAGTTACTTGAATCATGTGGAGGATTAATGGTAGATCGATCCGATAATCTCCCCAAGTACCTTTGTAAAGTTTGCGCAGAGGAACTACTAGTGGCGGCGAAATTCCGTGAAAAATGCTCAAAGTCCAATGAACTGCTGATGCAAATGATGCCCAGATTGGATGAAGGGGAAGTGGCAGTGGATGTATTGTATGAAGTTGAAACCAATCCCTTCATTGCTATGACGGAGGAGATTTTAAATGAGATTATCATCGAAGAAGTGGAAGATAAAGTACAAACGACCAACGAATGGTGTGAAAACGCGCAAATCGAGGATGGATCTGAGAATATCATTATCGAGAGTCCAGATCATGAGCTCCAAAACGAAGTAACGGACAAAATTGAAGACCAAAATTTGATTATTAACGAGCACGATCAAATGATTGATACCAAACCGAAGGAGCAATCAGAAGAGGAGCTAATCATCTCCGACAAGGACGAAACTGGCTATGTTGTGGAGACGATAACCAAGAAGAAACTTAAGATGAAGATGCGAAAAAAATCACAATCATCAGCTCCTATGAAATTTCATTGCGATGCTTGTGGTGCAGCTTTTTTCAACCATGAGAATCTCAATCGGCATTTGCGGACACATTCAGAATTCGCTGGGATTGTAAACACATGTCAATACTGCCTGCATCCGTTCACAACGATGGAGTCATTACAGGTGCATTACGATACCTCCCATCCAAGTGATACTACCCCCGTCATCTACtcgaaaaagcaaaacatactcaACAGTGAAACCTGCGAAACCTGTGGCAAGGTGTTCAAAACGAAGTCAAATCTTAGGGTTCATCTTCGAATACACACCGGAGATCGACCATATCCTTGCAGCGAGTGTTCGAAAACCTTCAAGACACAAGCAGCGCTGACACTACATCAGAAAAGACACGCTGGTCAATTCGACTACGAGTGCGAGGTGTGTGGGAAGCTTTTTGTCGAGTCCAGTAATCTGACAGTACATATGCGCACTCATACTGGAGAAAAGCCACATCCGTGCAAATTATGTGGGAAAAAATTCTCGAGGGTGTTCCTTTTGCAGCTGCATTTACGAACGCACACCGGGGAGAAGCCTTACAAGTGTGAGATGTGCAATAAGGCGTACAGCCAGAAGTGCGATTTGAGTATTCACATGAGGACCCACACCGGCGCCAGGCCATATGTTTGTCCGATTTGTTTTAGGGGCTTCGTCAAGAATCACGCATTGCAGAAGCACTTGCAGTTGCATCCGAAGGAGGAAATTCGTGTGAGTGTTCGGAATAACAAAGAAATTCCATCCTTATCCGCTACCACAATGGTTTCAATGTGCCGCTTGTGTGCTtcgttgaagaaaaatgaacatTTGACGTTTATCCGCGACAACAACCATGAATTGCGTCTGAAGTTATCCAAGTGCTGTCAgctaaatattaatttaaaagacATTCTACCGAAAGGTGTGTGTACAGAATGCATTCGTTCTTTAAATACTTCGTTTGAATTCTACGAGAGGGTACAAGAATCACAACAATCCCTTAGGCAACTCCTCAATATCGAAAATGACCCACCAtcaccaccaacaccaccaccacccacCGCGAAAGCATCGGAAGTTGATGATGACCCTGAGGCAATTTTAAAAGAACGTACATCTCAGGCTATGGTAGCAGCTGCTGTTGCTACCGCAACTGATAATACTTCCCCCGTAGAACCAGAATCAACTACAAGTGAGAATCATGATGAGGTCGTTAATCGAGTTATCAATGAAATACTCTCAGTGAAAGATGAAGAAATAGCGTATGTGGTTGTCGAACCAGAGCCCGAGGACGATGCACAGATAGAACCACTCTCGGAAATCGAAGAGGAGGAGGAATTGGAAGGACAGGATGACACTCAGACTGTTATTCTGGAAGCGTCATATGCTGGCCAAGAATACAtcgaagaagatgaaattgaaatcgagTATGACCTAAGTAAATTTGAAATCATCGAAGATGAAGTAATGGAAGCAGAGCTAGATGATGAAGAAGAGGCAGACGATCCAACATATTTTGAAGACCAACAGCAGTATGAGATTCAAGAAATCGAAGAAAACGATGAGGAGTCAAAGAAACCTTCTACTTCATTACCAGTAAAGTCGGAACCAACCGACACTTGGATTGAATACCCCTGGAAATGTGTTAGTTGTTCGGAAGTGTTTTGCTCTGCCAAGGAGTTGATCGAACACAACTTAATGGGGCACTTCTTGGTTGTACCCGACATGGAGTGGGAATGTGCGGATTGTCTAAAAACATATTCGCGATACTATATGCTGGTCAATCATATTCGTCAGCGTCATCGCACACACTTGGCTCTATTTTGTGATGTCTGCAATCAGACGTGTGAATCATTTGTTTCTCTGCAGGAACATCGAATCAGGGAGCATGCACAAGACGATCAACTGATTATGCTGTTATGTGCGACTTGTGGAAAGGGCTTTCATAATACGAACGCTCTGCAGGTACATAGCAAATGCCATTTGCCCGAGAATCAAAGATCGAGGTTTCCATGTTTGTTGTGTGACAAGAAGTTTCGTACCGCTTCCAATTTgaagtttcaccagaaaatgcATACAGgAGCTCGTGACTTTGTCTGTGATCAATGTGGGAAAAATTTCCGACAAAAAACCAACTTGGAAGAACATTTGCTGTCGCATGAATCATCAACACCTTATGAGTGTTCCATTTGCAACAAATTcTTTAAAACTCCGGATCGGCTTACGAAACACAAGCAACGGCATTCCGATGATAAACCGTTCACCTGTACAGAATGTGGAAATGGATTTCGTACAAAGGATAGTCTGGCTACGCATATGAGGATTCACACGGGTGAGATGCCATTTCGATGTGAATTCTGCCAGAAACCATTCAGGTTCAGGAGTACACTTAAcACTCATCACAACGTCCATACCGGTGTTAGACCATACTCGTGTCTTGAATGCGACCATCACTTCACCAATTGGCCAAACTACAACAAACACATGAAACGTCGTCACGACATTGATGCGTCTAGCAAAAATCCACGTGGCAAGAAACCCAGCAATCAACCCAAACCTCTGAAGAATCCAACAAAACCCATCGCCAAGGTGGAGCAGAATACTTGCAATGTTGCTGTTAAATTATTTGAGGATGAAGAGGATGCCGAACAACTTACCGGTGAATAA
Protein Sequence: MNNKTYTDLTCRVCLNVEELMVNIYEEVEDLQSNLVELLESCGGLMVDRSDNLPKYLCKVCAEELLVAAKFREKCSKSNELLMQMMPRLDEGEVAVDVLYEVETNPFIAMTEEILNEIIIEEVEDKVQTTNEWCENAQIEDGSENIIIESPDHELQNEVTDKIEDQNLIINEHDQMIDTKPKEQSEEELIISDKDETGYVVETITKKKLKMKMRKKSQSSAPMKFHCDACGAAFFNHENLNRHLRTHSEFAGIVNTCQYCLHPFTTMESLQVHYDTSHPSDTTPVIYSKKQNILNSETCETCGKVFKTKSNLRVHLRIHTGDRPYPCSECSKTFKTQAALTLHQKRHAGQFDYECEVCGKLFVESSNLTVHMRTHTGEKPHPCKLCGKKFSRVFLLQLHLRTHTGEKPYKCEMCNKAYSQKCDLSIHMRTHTGARPYVCPICFRGFVKNHALQKHLQLHPKEEIRVSVRNNKEIPSLSATTMVSMCRLCASLKKNEHLTFIRDNNHELRLKLSKCCQLNINLKDILPKGVCTECIRSLNTSFEFYERVQESQQSLRQLLNIENDPPSPPTPPPPTAKASEVDDDPEAILKERTSQAMVAAAVATATDNTSPVEPESTTSENHDEVVNRVINEILSVKDEEIAYVVVEPEPEDDAQIEPLSEIEEEEELEGQDDTQTVILEASYAGQEYIEEDEIEIEYDLSKFEIIEDEVMEAELDDEEEADDPTYFEDQQQYEIQEIEENDEESKKPSTSLPVKSEPTDTWIEYPWKCVSCSEVFCSAKELIEHNLMGHFLVVPDMEWECADCLKTYSRYYMLVNHIRQRHRTHLALFCDVCNQTCESFVSLQEHRIREHAQDDQLIMLLCATCGKGFHNTNALQVHSKCHLPENQRSRFPCLLCDKKFRTASNLKFHQKMHTGARDFVCDQCGKNFRQKTNLEEHLLSHESSTPYECSICNKFFKTPDRLTKHKQRHSDDKPFTCTECGNGFRTKDSLATHMRIHTGEMPFRCEFCQKPFRFRSTLNTHHNVHTGVRPYSCLECDHHFTNWPNYNKHMKRRHDIDASSKNPRGKKPSNQPKPLKNPTKPIAKVEQNTCNVAVKLFEDEEDAEQLTGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -