Rros017836.1
Basic Information
- Insect
- Rhingia rostrata
- Gene Symbol
- dnajc2
- Assembly
- GCA_949824845.1
- Location
- OX463757.1:73400185-73402106[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.011 26 5.8 0.0 4 31 421 452 419 457 0.83 2 2 3.2e-11 7.3e-08 33.1 0.2 4 41 538 579 536 583 0.92
Sequence Information
- Coding Sequence
- ATGTCACTGTCTTCTGAATGCTGCCTAGCGTTTAATCTTGTTTCCAAGGAGGTGCAACGCGTGGGTCTTCGCTTTCAGGCATTTGCAGGGCGTCATAATGTCCCTAGAACTAAATCAGAAGCATTGGAAAAATGGAACTCAAATGAATTTATCGTCGACATTGATTATTTAAAATCTCTGGATCCAAAGGAATGGAAAGATCAAGATCATTATTTGGTTTTGGGGTTAGGAAATTTGAGATATAACGCTACAGATGAGGATATTAAACGAGCTTATAGGAAAATGGTACTGCAACATCATCCTGATAAAAGGAAGGCAAAGGGAGAAGAGGTGCACACAGATACTGACTACTTTACGTGTATTACCAAGGCCTATGATGTGTTAGGTACTCATAAAAATAGACGTGCATATGACTCTGTGGACCCTAAGTTTGACGACGCATTACCAACGCAAACGGAGATCGAAAATTCTTTTTATGAagtatttggaaaatattttaatttgaattcgaGATGGAGTGAGCGAAAATGTGTGCCATCGTTTGGCAATGAAGATTCAAAGCGAGAAGATGTAGACAATTTTTACAGTTTCTGGTATGATTTTGAGTCTTGGCGTGAGTTTAGCTACCTGGACGAAGAGGATAAAGAAAAAGGACAAGATAGGGACGAAAGGCGTTggattgaaaaacaaaacaaagttgcacgaattaaaagaaaaaaagaagaaatgtcTAGAATACGGTCGTTAGTTGATTTAGCATATAACAATGATAAACGaattgcaaaatttaaaaatgaagaaaagcAACGAAAAATTGCATTGAAAAGAGCTAAAATGGATGCCGTTCAAGCGCAAAAAGAAGAAATTGAGCGGACAATTAAAAAtgcgcagttagctaaagaAAAAGCAGATAAAGCTGAACAAAAGCGAATAGAAAGAATACGATATGAAAAGGAACAATATAAGAAAGCTGTTAAAAAAGAACGAAAAATGTTAAGAGACAAAGCTAAAGAATGTAATTATTTCTCATCTTCTGACAAAGATATGCTTCGAAACATGGAAGGAGTGGAGAAAGTATGTGAAATGCTAACGTTATCCGAACTACAAAACCTAAACAAAGATGTTGCGGAGAACAGCAGCCAAGCATTCTTTAACGTCTTAcatgaattggaaaaaaaacagcAGGAAGAACGCCAAGAAGATGcgcaaacaaaatttgaaactAAAACAGAACTAaacattttgaacaaaaatgatttatggATGAATGAAAGTATTCAAACTCTTATTAAAGCCGTCAATCTCTTTCCAGCAGGAACCGCGCAAAGATGGGAAGTCATTGCTACGTTTATGAATCAACATGTTAATAATGGCGTTAGTTTTACATCTAAGGATGTTCTTAGTAAAGCCAAATCTTTGCAACAAAGCGATTTTTCTAAAAGTGTTTTAAAAGCAGAAGCGAACGACAGTGCTTTCCTAAGTTTTGAGAAATCGAAAAAAGAATTGCCCGTTGTTTCAGATAATTTGTTAGCTGAATCCAGCACttgcgaaataaaaacaaaaactgataGTGGGGCATCTAAAAATGTTCAGAACTCATCTCAAAAAATTTGGACAAAGGAAGAACAAGCTCTTTTAGAGCAGGCGATTAAGTCGTTTCCCATTTCTACGCCTGATCGGTGGGATAGAATTGCTGAATGTATTCCTAATAGAAGTAAGAAAGATTGCTTACGAAGGGTGAAGGAATTGGTTGATTTAGTTAACTCGAAGAAGGACGCTAAACAAGGGACGAAGTAA
- Protein Sequence
- MSLSSECCLAFNLVSKEVQRVGLRFQAFAGRHNVPRTKSEALEKWNSNEFIVDIDYLKSLDPKEWKDQDHYLVLGLGNLRYNATDEDIKRAYRKMVLQHHPDKRKAKGEEVHTDTDYFTCITKAYDVLGTHKNRRAYDSVDPKFDDALPTQTEIENSFYEVFGKYFNLNSRWSERKCVPSFGNEDSKREDVDNFYSFWYDFESWREFSYLDEEDKEKGQDRDERRWIEKQNKVARIKRKKEEMSRIRSLVDLAYNNDKRIAKFKNEEKQRKIALKRAKMDAVQAQKEEIERTIKNAQLAKEKADKAEQKRIERIRYEKEQYKKAVKKERKMLRDKAKECNYFSSSDKDMLRNMEGVEKVCEMLTLSELQNLNKDVAENSSQAFFNVLHELEKKQQEERQEDAQTKFETKTELNILNKNDLWMNESIQTLIKAVNLFPAGTAQRWEVIATFMNQHVNNGVSFTSKDVLSKAKSLQQSDFSKSVLKAEANDSAFLSFEKSKKELPVVSDNLLAESSTCEIKTKTDSGASKNVQNSSQKIWTKEEQALLEQAIKSFPISTPDRWDRIAECIPNRSKKDCLRRVKELVDLVNSKKDAKQGTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01253834;
- 90% Identity
- iTF_01299971;
- 80% Identity
- -