Rros014099.1
Basic Information
- Insect
- Rhingia rostrata
- Gene Symbol
- SNAPC4_1
- Assembly
- GCA_949824845.1
- Location
- OX463756.1:125092971-125096234[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 1.3 3e+03 -0.9 0.0 4 18 178 192 177 193 0.93 2 6 3.9e-10 9.1e-07 29.6 0.1 1 44 273 317 273 319 0.94 3 6 1.5e-13 3.4e-10 40.6 0.2 2 43 329 374 328 375 0.94 4 6 5.3e-12 1.2e-08 35.6 0.0 2 44 384 427 383 429 0.91 5 6 5.1e-14 1.2e-10 42.1 0.1 3 43 437 478 435 480 0.94 6 6 4.5 1e+04 -2.6 0.0 33 45 589 601 559 602 0.59
Sequence Information
- Coding Sequence
- ATGGCATCTGCAGAAAAGGACCTAGAAAATGTAGAATCCAGTGATGAGTGCGAATCCAACGAAAGTGATGAAAGCTACATCGATGATTCTGAAGATGATAGCAATCAGGACGATGATGAGGACGAACGTGATAGTGAAGATGGAACTCGCATTGTATACACAGATAAATTGTTTGGTGAACAGAATTTCGATTACCTTTCTGAAGCAGTACATCTGCTGGAAAATCGTGCCGAAGTCAATTCGGATAATGCTATTGCTCTCAATCGTGGACTACAGGATATGCTCGAGACGCTCCGTCACAAAATGATTTCAATGTTGAacacatgtcgtcagaaatatATTGAAAATCAGCACAAGCTATCGAATTCGACAACTGTAATCAAAACAATGAAAGGTATAGGTAGTTGTGCTTCACCATTCTTTAAGGACGCACTTGGCAAGCATTGTCCGCCAAATGCTGACTATAAGTACCGCAGTGAGGTCGAGAAGGAACTTTTTCCATCTGATCTGGAACTATTTCCCCATTTAATCTGGACACCTGCCGACAAGCTGAGTATATTACAAGGTGTAAAGGAGCAGGTGATCGAACATATCGAACGGAAGCAATCCTACCCGTCGACTAGTTCGGAtaaaaagcaaattaaaataaGAAAGAACGTAAAGATGCACTCACTCAAACTCAAGGATTTGCTTGATAATGTCGACAGTGAGTTTACCGTCGATTGGAATCAAATTTCTGTGTACAATTTAGACTCACGACACACGGGCACCAGCTGCTTTGCCATTTGGAATGTATACCTTAAGCCAGAATTAAATCGTGATGAATGGTCGGATGAGGAAAACCTAAAATTGAATGCTCTTgcaaagaaatacaaatttcaaGATTGGATTGCCATAGCAGCAGAGATGAAGGGTCGATCAGATTATCAATGTTTTGTACAGTATCAAACGGTGGTGTCGGTAAGAATGCGAGAAGATAAAGGTGAACGGTGGACAAAGGACGAGGATGAACTGTTGCTGTCTTTAGTTGAAAAGAATCGAGTGGGAAATCTGATTCGATGGAATCCGATTTGCTCGCAGTTGCCCAACAGGACGAAGAAGCAGTGCTTTGCGCGTTACAAGTATGGAATCAATCCATCTATACTGAGAGCACCTTTCACACAAGAGGAAGACTGCATCATTTTGGCCGCCGTTGAGGAGTACGGTGAGAACTTCAATTTGTTTCCCAAGGCGCTCTTCCCCAACCGTACTGTTGTTCAAATTCGCAACCGATACTACAATTCAATTAAAGCCCGTGAGCATACGCGCGCCTGGACGCCGGATGATGATAAAATGCTGCTAAATCTCGTCGTCCAACATGGTAATCGCGACTGGAAGAAAATATCTGAATCATTTAAAACGCATTCACGCACGAGTTGTCGGACCCGCTTTCTTGTAATTTCAAGATTTCTCAAAGAAAACCCCGATGCCTCGATTGCAGATTTGCCTAGAAAGAATCGGGCTCCTCTCTCTTCCGTTACCAAACGTAACTGGATGAACAAATTCGTAGAGATCAAAGCTCCTGCCGAGAAAAcagttgtcaaaaaaaatacCTACCGCAGTCGATTACGACGAAAGGAACTCGAGTGGTACGACTTTTTAAAATTCGGCTATGATTTTAAATTACTCGGCGGTTACAACAAAGTGTCGGAGCACTTGCATGGTCTTGAATTTGCGAGAATTGCTTTCGATTTACAACAACAGCCTACTGTTACACATGATCACAGAACACCAGCGATAGTGCGTGtgtattttcaaaaactcaaacGAATGCATTCGGAAGAAAACAAGTTTCGGTTGAGTGATGCGCCGTATATTGGGTATAGGCTTCCGCCGAGCTATTGCACCATGCTCGGCTTTAGAGGGCTTTGTATACTTTCCTCATCCGACGACAACAACAAGGATGCAGATATATCTTCGGCAATAGTTATGAAAGAACTTTCCGAGGTAGAAGCGGCCAAGGAGAAATTTCGTCAGCGTTTGATAAGTCTTCTATACAAGACCACCCTTCTGAGTCGTTTGGATCCGGAGTTGGTGGTCACTCACGATCACTATGAAGTCATCATTCATCAGAGCTCAAAAGTGGGTAAACTAGCCAAAGCCAAGGCTAAGCTCGACCAGATTAACGAGATCGCCAAAAATCTTCAGATTGCCACCCACAAAGCGAAAAGAGATTCTTCGAATGCACCACCGCCGAGTAATAATCAAAAAATCCAGATTGATGAGATCGCCAAACATCTTCAGATCGCCACTAAAAAAGCGAAAAGAGTTTCTTCGAATGCACCACCGCcgagtaaaaaacaaaaaatcgaaacCGAATAA
- Protein Sequence
- MASAEKDLENVESSDECESNESDESYIDDSEDDSNQDDDEDERDSEDGTRIVYTDKLFGEQNFDYLSEAVHLLENRAEVNSDNAIALNRGLQDMLETLRHKMISMLNTCRQKYIENQHKLSNSTTVIKTMKGIGSCASPFFKDALGKHCPPNADYKYRSEVEKELFPSDLELFPHLIWTPADKLSILQGVKEQVIEHIERKQSYPSTSSDKKQIKIRKNVKMHSLKLKDLLDNVDSEFTVDWNQISVYNLDSRHTGTSCFAIWNVYLKPELNRDEWSDEENLKLNALAKKYKFQDWIAIAAEMKGRSDYQCFVQYQTVVSVRMREDKGERWTKDEDELLLSLVEKNRVGNLIRWNPICSQLPNRTKKQCFARYKYGINPSILRAPFTQEEDCIILAAVEEYGENFNLFPKALFPNRTVVQIRNRYYNSIKAREHTRAWTPDDDKMLLNLVVQHGNRDWKKISESFKTHSRTSCRTRFLVISRFLKENPDASIADLPRKNRAPLSSVTKRNWMNKFVEIKAPAEKTVVKKNTYRSRLRRKELEWYDFLKFGYDFKLLGGYNKVSEHLHGLEFARIAFDLQQQPTVTHDHRTPAIVRVYFQKLKRMHSEENKFRLSDAPYIGYRLPPSYCTMLGFRGLCILSSSDDNNKDADISSAIVMKELSEVEAAKEKFRQRLISLLYKTTLLSRLDPELVVTHDHYEVIIHQSSKVGKLAKAKAKLDQINEIAKNLQIATHKAKRDSSNAPPPSNNQKIQIDEIAKHLQIATKKAKRVSSNAPPPSKKQKIETE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01299966;
- 90% Identity
- -
- 80% Identity
- -