Basic Information

Gene Symbol
SNAPC4_1
Assembly
GCA_949824845.1
Location
OX463756.1:125092971-125096234[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.3 3e+03 -0.9 0.0 4 18 178 192 177 193 0.93
2 6 3.9e-10 9.1e-07 29.6 0.1 1 44 273 317 273 319 0.94
3 6 1.5e-13 3.4e-10 40.6 0.2 2 43 329 374 328 375 0.94
4 6 5.3e-12 1.2e-08 35.6 0.0 2 44 384 427 383 429 0.91
5 6 5.1e-14 1.2e-10 42.1 0.1 3 43 437 478 435 480 0.94
6 6 4.5 1e+04 -2.6 0.0 33 45 589 601 559 602 0.59

Sequence Information

Coding Sequence
ATGGCATCTGCAGAAAAGGACCTAGAAAATGTAGAATCCAGTGATGAGTGCGAATCCAACGAAAGTGATGAAAGCTACATCGATGATTCTGAAGATGATAGCAATCAGGACGATGATGAGGACGAACGTGATAGTGAAGATGGAACTCGCATTGTATACACAGATAAATTGTTTGGTGAACAGAATTTCGATTACCTTTCTGAAGCAGTACATCTGCTGGAAAATCGTGCCGAAGTCAATTCGGATAATGCTATTGCTCTCAATCGTGGACTACAGGATATGCTCGAGACGCTCCGTCACAAAATGATTTCAATGTTGAacacatgtcgtcagaaatatATTGAAAATCAGCACAAGCTATCGAATTCGACAACTGTAATCAAAACAATGAAAGGTATAGGTAGTTGTGCTTCACCATTCTTTAAGGACGCACTTGGCAAGCATTGTCCGCCAAATGCTGACTATAAGTACCGCAGTGAGGTCGAGAAGGAACTTTTTCCATCTGATCTGGAACTATTTCCCCATTTAATCTGGACACCTGCCGACAAGCTGAGTATATTACAAGGTGTAAAGGAGCAGGTGATCGAACATATCGAACGGAAGCAATCCTACCCGTCGACTAGTTCGGAtaaaaagcaaattaaaataaGAAAGAACGTAAAGATGCACTCACTCAAACTCAAGGATTTGCTTGATAATGTCGACAGTGAGTTTACCGTCGATTGGAATCAAATTTCTGTGTACAATTTAGACTCACGACACACGGGCACCAGCTGCTTTGCCATTTGGAATGTATACCTTAAGCCAGAATTAAATCGTGATGAATGGTCGGATGAGGAAAACCTAAAATTGAATGCTCTTgcaaagaaatacaaatttcaaGATTGGATTGCCATAGCAGCAGAGATGAAGGGTCGATCAGATTATCAATGTTTTGTACAGTATCAAACGGTGGTGTCGGTAAGAATGCGAGAAGATAAAGGTGAACGGTGGACAAAGGACGAGGATGAACTGTTGCTGTCTTTAGTTGAAAAGAATCGAGTGGGAAATCTGATTCGATGGAATCCGATTTGCTCGCAGTTGCCCAACAGGACGAAGAAGCAGTGCTTTGCGCGTTACAAGTATGGAATCAATCCATCTATACTGAGAGCACCTTTCACACAAGAGGAAGACTGCATCATTTTGGCCGCCGTTGAGGAGTACGGTGAGAACTTCAATTTGTTTCCCAAGGCGCTCTTCCCCAACCGTACTGTTGTTCAAATTCGCAACCGATACTACAATTCAATTAAAGCCCGTGAGCATACGCGCGCCTGGACGCCGGATGATGATAAAATGCTGCTAAATCTCGTCGTCCAACATGGTAATCGCGACTGGAAGAAAATATCTGAATCATTTAAAACGCATTCACGCACGAGTTGTCGGACCCGCTTTCTTGTAATTTCAAGATTTCTCAAAGAAAACCCCGATGCCTCGATTGCAGATTTGCCTAGAAAGAATCGGGCTCCTCTCTCTTCCGTTACCAAACGTAACTGGATGAACAAATTCGTAGAGATCAAAGCTCCTGCCGAGAAAAcagttgtcaaaaaaaatacCTACCGCAGTCGATTACGACGAAAGGAACTCGAGTGGTACGACTTTTTAAAATTCGGCTATGATTTTAAATTACTCGGCGGTTACAACAAAGTGTCGGAGCACTTGCATGGTCTTGAATTTGCGAGAATTGCTTTCGATTTACAACAACAGCCTACTGTTACACATGATCACAGAACACCAGCGATAGTGCGTGtgtattttcaaaaactcaaacGAATGCATTCGGAAGAAAACAAGTTTCGGTTGAGTGATGCGCCGTATATTGGGTATAGGCTTCCGCCGAGCTATTGCACCATGCTCGGCTTTAGAGGGCTTTGTATACTTTCCTCATCCGACGACAACAACAAGGATGCAGATATATCTTCGGCAATAGTTATGAAAGAACTTTCCGAGGTAGAAGCGGCCAAGGAGAAATTTCGTCAGCGTTTGATAAGTCTTCTATACAAGACCACCCTTCTGAGTCGTTTGGATCCGGAGTTGGTGGTCACTCACGATCACTATGAAGTCATCATTCATCAGAGCTCAAAAGTGGGTAAACTAGCCAAAGCCAAGGCTAAGCTCGACCAGATTAACGAGATCGCCAAAAATCTTCAGATTGCCACCCACAAAGCGAAAAGAGATTCTTCGAATGCACCACCGCCGAGTAATAATCAAAAAATCCAGATTGATGAGATCGCCAAACATCTTCAGATCGCCACTAAAAAAGCGAAAAGAGTTTCTTCGAATGCACCACCGCcgagtaaaaaacaaaaaatcgaaacCGAATAA
Protein Sequence
MASAEKDLENVESSDECESNESDESYIDDSEDDSNQDDDEDERDSEDGTRIVYTDKLFGEQNFDYLSEAVHLLENRAEVNSDNAIALNRGLQDMLETLRHKMISMLNTCRQKYIENQHKLSNSTTVIKTMKGIGSCASPFFKDALGKHCPPNADYKYRSEVEKELFPSDLELFPHLIWTPADKLSILQGVKEQVIEHIERKQSYPSTSSDKKQIKIRKNVKMHSLKLKDLLDNVDSEFTVDWNQISVYNLDSRHTGTSCFAIWNVYLKPELNRDEWSDEENLKLNALAKKYKFQDWIAIAAEMKGRSDYQCFVQYQTVVSVRMREDKGERWTKDEDELLLSLVEKNRVGNLIRWNPICSQLPNRTKKQCFARYKYGINPSILRAPFTQEEDCIILAAVEEYGENFNLFPKALFPNRTVVQIRNRYYNSIKAREHTRAWTPDDDKMLLNLVVQHGNRDWKKISESFKTHSRTSCRTRFLVISRFLKENPDASIADLPRKNRAPLSSVTKRNWMNKFVEIKAPAEKTVVKKNTYRSRLRRKELEWYDFLKFGYDFKLLGGYNKVSEHLHGLEFARIAFDLQQQPTVTHDHRTPAIVRVYFQKLKRMHSEENKFRLSDAPYIGYRLPPSYCTMLGFRGLCILSSSDDNNKDADISSAIVMKELSEVEAAKEKFRQRLISLLYKTTLLSRLDPELVVTHDHYEVIIHQSSKVGKLAKAKAKLDQINEIAKNLQIATHKAKRDSSNAPPPSNNQKIQIDEIAKHLQIATKKAKRVSSNAPPPSKKQKIETE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01299966;
90% Identity
-
80% Identity
-