Rros011171.1
Basic Information
- Insect
- Rhingia rostrata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949824845.1
- Location
- OX463756.1:70551380-70554163[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-14 3.2e-11 43.5 0.1 1 44 11 55 11 56 0.93 2 2 4.9e-18 2.1e-15 56.8 0.0 1 43 513 556 513 558 0.95
Sequence Information
- Coding Sequence
- ATGACACAATGCACCGGCCGTAGGACCTACACGGAGGAAGAATTAAACAGCGCATTGCAGGACATCATGAGTGGTCGGCTGGGTACTCGTCGCGCAGCCGTACAATATAACATTCCGCGTTCAACATTGCGCAACAAAGTATATAAAATCTCATCAGGTGTGAAGCGTGAAACGCCCACATCACTGCGTCATTTGGCCAGTCTTGAGGATTTGGCCGATGGTGACGATGATAATAAAGATCTGTCGGCCGACGAAGAGGACAGCAGCGGTGATAAGATCCTAGGCAGTGCCATAGCGTCACATGCAGGCGATGATCTTGCCAGTCGGTTTGCCGAAGGGACTCTTGCTGCGAATTTTCAAAAGATCTGTGGAGAACAAAACAGCCTAGCATCTCATtcgcagcagcaacagcaacacccGCATAATGATCTGCAAATCCGTAACAAGCCTTCAACATCACTGGAGTCGCAGCCGAAGCGCGAAGTCGCAACACCGCAACCTCCGCCGCAACAAGCATCACCGATCGCCCAAAACACGTGGCAGAACGTCCTCCTGCAGAGCCTGCTTCTATCGGGCGGTCTTCCCATCCAACAGAACTTTGATGAAGCTTTACAAATATTCAATGCTTTGATGATAAAGCAGGATCCAAGTTTGATTAATCCGCAGCTGTTAATGCAACTGCAACAGTCTCAACAGTCGCCACAGTCAgcacaacagcaacagcaacagaatCAACATCACCTGCATTCGAATGCGACAGGAAATCCGTCACAAGCTGCAGCGGCGGCAGCAGTGGCAGCAGCATCTTTTCAAAATCGTCAACCAAAGTCTGAAACACCAGAAACTACATCCTCAGTGGACCTGAATGAGGCGCTAGGTGATGATCCATCAGTTATTCTAAAAATTCCGTCCTACAAACCGGTAGCAGGATCCTCAACTTCATCAGCTGTTGCTGCGGCGGCTGTAGCAGCGGCAGCGGCATTATGCAACAATAAGAACGGTGAAAGCTTGCCATCGAGTTCACCAAAAATGCCCATATCTTCGAATCAGTTGGGTGCCAATACCTCAGCACAACAATTGCATCACCATCATCACCTGCATCCGCATCAAAGTTCGTCGGTATCATCAGTAAATAACATTTCTGGGATATCGCCGCCTTTGCTGCGTCACACTAGTGGCGAATCGCAGTCACCGCCAACTCTATCCCTTCGTGATGTCATCGCGAACAGTATAAGCCGGACGTTCAATCAACAGGCAAACAAAGACAACACCAGTCCGAGTCCAGCTCACTCGTCATCGTCGGCGATGGATCATAATGACCAATACAAACGGCCCAGCATATCAGTGATTAAGAACATCGGCGGTACCGATACCTCACGCTTTGCTACCGCGCCTAATTTACTTGGCGGTCATCACAACTCCAATCACCACCACCAGCAGCACCATCACCATCAACATCACAGCCAGAATGCGGGAAACAACAACTTGGCGGGAGGCAAAGGTACACGACCGAAACGCGGAAAGTACCGCAACTATGATCGTGATAGTCTCGTCGAAGCTGTAAAGGCGGTGCAACGCGGGGAGATGTCAGTACACCGTGCGGGCAGTTACTATGGCGTGCCACACTCGACGCTGGAGTACAAGGTCAAAGAACGTCATTTGATGCGGCCCCGAAAGCGAGAACCCAAACCGCAACCACCTCTTGACGACCGGACAGGAGGCAGTACTTCGGTCGGTAATACTTCAGGCACTGTGGGGAACACCTCAAAAAACTCAAACATTCCAGGTCTATCGGCTGTAAATAGTTTAGATAAATTGAGTAAGAATAGCGGCACTGCGGGCACTAGTGTCAATCAAAAACAGTTGGCCGCTAGCAAAAGCAACCCACCATTCCCTACGACATCACCAAATGGCATGAAGATACCTTCGGCACTTTTCGAGCCAAGTTTAGCCGCTCAGCTGCAGTATTCTCCTCACCTCTTTTGGCACACTGGCTTTGGACCCCTACAAATGGATTTCAATTCAAGGTCTCAGGCTGCGGCAGCGGCTGTTGCCGCTGCAGCTGCAGCAGGAGGTGGTCCCAATAACCCATCATTTTCTGCTAACGCAGAATTCTTGAAAACCCAAATGATGCAGAGGTTCCACGAAGATCGAGGACCGCCGAATCCCATCAGCAGTCCCCCAGCGCCCACACCCATCAGCAATTCCACCAGCAATAGTACCAACAACACAAAAAGTGTACGTGACATCGCTGAGAAACTTTATGATCCCGGCAATGCGAACGGTTCCTTCTTAGACGGCATCATCCGCAAGACGCTCGACCGCAAAAGTTCCGATCTAACACAAGGCGCCTTATTAGACCAATTGGTCAAGAACAGTAAACCACCAACACCGCGTCTAATGATTAATAATGACCGTATACCAGGCGATATGCTAAAGCTGAAGCGTTCCGCTAGCCCTATGCAATATCACACGTCGATGGACATTAAGCGGGAACGCGCCAGTCCATCATCAGAATCATCAAACAGTGATTCGGAACGCAATCATCGGCGGGACACTGATTCAGAACCCCTACCACCGCCTTCACAGCACCATGCAATGGGACTGCATCACGCTCTTTTGGGCGCCAGCAATGACTTGAATGGCGCCCAACACGGAGTCAATCTAATATCCACGGCCGAAAATAATCTATCAGCGTCAGCGGCATCATCATCTGCGATGGCTACCAGTATTCTGCAGGAGAAATTGGGGCAAATCAAGTCCGAGGCGGAAGATAGTTTATAG
- Protein Sequence
- MTQCTGRRTYTEEELNSALQDIMSGRLGTRRAAVQYNIPRSTLRNKVYKISSGVKRETPTSLRHLASLEDLADGDDDNKDLSADEEDSSGDKILGSAIASHAGDDLASRFAEGTLAANFQKICGEQNSLASHSQQQQQHPHNDLQIRNKPSTSLESQPKREVATPQPPPQQASPIAQNTWQNVLLQSLLLSGGLPIQQNFDEALQIFNALMIKQDPSLINPQLLMQLQQSQQSPQSAQQQQQQNQHHLHSNATGNPSQAAAAAAVAAASFQNRQPKSETPETTSSVDLNEALGDDPSVILKIPSYKPVAGSSTSSAVAAAAVAAAAALCNNKNGESLPSSSPKMPISSNQLGANTSAQQLHHHHHLHPHQSSSVSSVNNISGISPPLLRHTSGESQSPPTLSLRDVIANSISRTFNQQANKDNTSPSPAHSSSSAMDHNDQYKRPSISVIKNIGGTDTSRFATAPNLLGGHHNSNHHHQQHHHHQHHSQNAGNNNLAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPPLDDRTGGSTSVGNTSGTVGNTSKNSNIPGLSAVNSLDKLSKNSGTAGTSVNQKQLAASKSNPPFPTTSPNGMKIPSALFEPSLAAQLQYSPHLFWHTGFGPLQMDFNSRSQAAAAAVAAAAAAGGGPNNPSFSANAEFLKTQMMQRFHEDRGPPNPISSPPAPTPISNSTSNSTNNTKSVRDIAEKLYDPGNANGSFLDGIIRKTLDRKSSDLTQGALLDQLVKNSKPPTPRLMINNDRIPGDMLKLKRSASPMQYHTSMDIKRERASPSSESSNSDSERNHRRDTDSEPLPPPSQHHAMGLHHALLGASNDLNGAQHGVNLISTAENNLSASAASSSAMATSILQEKLGQIKSEAEDSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00312508;
- 90% Identity
- -
- 80% Identity
- -