Rros003074.2
Basic Information
- Insect
- Rhingia rostrata
- Gene Symbol
- kn
- Assembly
- GCA_949824845.1
- Location
- OX463755.1:71074607-71151921[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-233 1.8e-229 763.6 0.0 11 385 167 557 158 560 0.97 2 2 6.1e-11 6.1e-07 28.8 12.7 422 512 560 652 557 671 0.78
Sequence Information
- Coding Sequence
- ATGACAACGCTATTGCTGGTCTCTGCTGGCTTTGCACTGCCTGTCTGCTTTGGCGTACTGCTGCATCGCATCTCTGGTGTTAGGATCGGGAATTCGAATACGAATACGGAACCGATACGGGTACAACAGCTGTACAGCACTGTGGACGGTCGTCGTCGTTGTCTACACGTTGGTGGTTCGGTCGGTTGTGTTGTAACGCAGCAGCAGGGATTCAGTTGGGGTTTAACAGTCACTCGGGACGAACACTCTCGGTGGCAGGCTTTGGCATTTGGACACAGTGTGCGCCATCTATATTTTGTGAACGGTAAAACGAACTGCTTCAAGCTGCGTTCCGACGAGCCGGTGCCGGGCTTTAGCTCGGCTTCTCCATGGCCAACTCTCGAATTGGAATGGGGTCGCAAGCTGTACCCTACAACGGGTCCGCGATCAGCCAGCGGTCTAATGTTTGGGCTACCACCCACAGGGGCCGATTTAAATCAGCCTCGGGGACCGATGACATCGCTGAAAGAGGAGCCACTCGGTGCTAGGGCATGGATGCAACCAGTCGATCAGACCAACCTTGGTATCGGTCGCGCCCACTTTGAGAAACAGCCCCCTAGCAACCTGCGTAAGTCGAACTTTTTCCACTTTGTAATCGCGCTCTATGATCGGGCCGGTCAACCTATTGAAATCGAACGTACCGCATTCATCGGTTTCATCGAAAAGGACTCCGAGTCGGACacgacaaaaacaaataatggcATCCAATATCGATTGCAGCTCCTCTACGCCAACGGTGCCCGCCAGGAGCAAGATATTTTCGTGCGTCTCATCGATTCGGTGACCAAGCAGgcAATTGTATACGAAGGACAGGACAAGAATCCGGAAATGTGCCGCGTTCTATTAACGCATGAAGTAATGTGCAGtCGCTGTTGTGATAAAAAGAGCTGTGGTAACCGAAACGAGACTCCTTCAGATCCTGTCATCATCGATCGatttttccTGAAGTTTTTCTTGAAATGCAATCAAAATTGTTTAAAGAACGCTGGTAATCCAAGGGACATGAGACGATTTCAGgtTGTGATATCAACACAAGTGGCTGTTGACGGACCACTCCTAGCCATTTCAGATAACATGTTCGTGCACAACAACTCAAAACATGGTCGTCGCGCAAAACGGATGGACGCCACGGAAGGTACAGGAAATTCTCCCCTGTCCATTTCGGGTCACCCCCTTGCGCCTGACAGTACCTATGATGGTCTCTATCCTCCACTACCAGTTGCGACACCGTGCATAAAAGCGATATCACCCAGTGAAGGCTGGACCACCGGCGGAGCTACCGTCATCATTGTCGGTGACAACTTCTTCGATGGCCTTCAAGTTGTCTTCGGTACGATGTTGGTCTGGAGTGAGCTAATAACCTCGCATGCCATACGCGTCCAGACACCACCGCGACATATACCCGGCGTAGTTGAGGTTACACTCTCCTACAAGAGCAAGCAATTCTGCAAAGGTTCACCTGGACGATTTGTCTATGTTTCAGCTCTCAATGAACCGACGATAGACTATGGCTTCCAGCGTCTGCAAAAATTGATTCCACGCCATCCGGGCGATCCCGAAAAGCTGCAAAAGGAGATTATCCTTAAACGTGCCGCCGATTTGGTTGAAGCACTCTACTCGATGCCAAGATCTCCCGGAGGTACAACTGGATTCAATTCATATGCTGGCCAATTGGCCGTTAGTGTTCAGGATGGAACCGGTCAATGGACCGAAGATGAATACCAGCGAGCACAGAGCAGTAGTGTAAGTCCACGCGGTGGCTACTGTAGCAGTGCATCGACGCCGCACTCCTCGGGTGGATCCTATGGGGCTACTGCCAACGGCTATGGACCGGCACCGAACATGGGCGCATTGTCATCGTCGCCGGGAAGTGTATTCAATTCGACATCAACTAGTGCCTTTTCGCCATTAATCTCAACAGTGTCGTCCCCATGGCATCAAGCACTCGTTcaacatcatcaccatcatcactCGCATCCGCATCCGCACCATCATCATTCGCATCATCCACTACAGCCGTGGCATAATCCGACAACAGTATCAGCAACAGcagctgtttaa
- Protein Sequence
- MTTLLLVSAGFALPVCFGVLLHRISGVRIGNSNTNTEPIRVQQLYSTVDGRRRCLHVGGSVGCVVTQQQGFSWGLTVTRDEHSRWQALAFGHSVRHLYFVNGKTNCFKLRSDEPVPGFSSASPWPTLELEWGRKLYPTTGPRSASGLMFGLPPTGADLNQPRGPMTSLKEEPLGARAWMQPVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDTTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRMDATEGTGNSPLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGTTGFNSYAGQLAVSVQDGTGQWTEDEYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATANGYGPAPNMGALSSSPGSVFNSTSTSAFSPLISTVSSPWHQALVQHHHHHHSHPHPHHHHSHHPLQPWHNPTTVSATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00251134;
- 80% Identity
- -