Rcam005057.1
Basic Information
- Insect
- Rhingia campestris
- Gene Symbol
- GATA6_1
- Assembly
- GCA_932526435.1
- Location
- CAKOBE010000035.1:3923227-3925312[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4 7.8e+03 -2.5 0.1 17 27 292 302 290 308 0.68 2 3 1.6 8.8e+03 -2.7 1.4 11 26 304 318 296 319 0.62 3 3 1.6e-17 8.6e-14 51.7 5.1 1 34 351 383 351 385 0.97
Sequence Information
- Coding Sequence
- ATGCAACCAAAAACCCTAACCCTACCACCCTACTCTCCTTTTCCAACCCACAGAGAAGTCAACGATACTGTGCGAGAAACAGATCCCGATTCAGACTACAACAGCCACCAACACTCGCCATCGGAATTCGTTCAAATGACGCCCCGACCTGAAGAACCCACAACCGTCTACGCTTATGAGAGCACTCCGGCAGGAACTACCCTCATCGCTTGCGAGAATCCAACAATTAAAATCGAATCCCTTGACAAGGAGCAACAACAACACCTACAGCAACAATCCGATCAGCCACCCACTGGTACAACAGCCGTCTACCCCGAAGGAACTGTAGTATCCGCAGAAGCGCTTCAAAATCACCATACCCAGCACCCGCAACACCACACCACGCTACGTGTCTACGAGGACGAACGCTTTCCGGCGGGCATCGAAAACGGTGATCAAACTCAAATAATTTTCTACGAAAATTCACTGAATGGCACCACTGTTGTCGATCCGCACAATGAGGCGAAAACCTTCACAAATCTTGGCCCAGCTGCGGGTAGTCTTCCCACCTCCGGATCCGAATACTCAGTCTCCAGCAACTACAGTTCTAACAGCACATATGGCCTGGCCCAGACCTACAACATGTCCAATACCAATCCGCTAATGTACAAATCTGATCCGACTTTGAGTTCGATTCGGCCGAATAGTCAATTCCCGCTCACCGTGTACGAGAACCCCACTGTATCCGAATCCTATTGGGCCAACTCAGCCTCCATGGAGTTCTCCAACATTGCTCCGTTCAATGCGGTGATTGCCGATGAATACGGTTCATCGAATGGCAACTCATGGGTGCAGTCTGCCGCAGGCACCGCCACTACGATCGCCTATGACCCAAGTGGAGGCGATACCAAGTGCCAATACTGTGGCAGCCAGCTGATAAGAAAGGAAAACAACGAAATCATATGTGCCGGATGCTCATCGTCGCGTATGTCCTTTGCGCCGCGAATACAACCGCGTCAGACAAAGCCGAAGACGACCACTGCGAACAACAATCGCAGGAATGGAGTTAGCTGCGCGAATTGCTTCACCACCTCGACCACGTTGTGGCGGCGCAACAACGAGAGTCAACCGGTTTGCAATGCATGCGGATTGTACTTCAAGTTGCACAACATGAATCGGCCGCTTACCATGAAGAAGGAGGGCATCCAGAAGAGGAAACGCAAGCCGAAGCTGGCGAATGGAGCACCGATGAGGAACCCCCTACCAAGGCAATTGCATGAGACTTCGATGGAAAATGACATAAATATGTCTACGGCGATTATGACAGGTGACAAGTAG
- Protein Sequence
- MQPKTLTLPPYSPFPTHREVNDTVRETDPDSDYNSHQHSPSEFVQMTPRPEEPTTVYAYESTPAGTTLIACENPTIKIESLDKEQQQHLQQQSDQPPTGTTAVYPEGTVVSAEALQNHHTQHPQHHTTLRVYEDERFPAGIENGDQTQIIFYENSLNGTTVVDPHNEAKTFTNLGPAAGSLPTSGSEYSVSSNYSSNSTYGLAQTYNMSNTNPLMYKSDPTLSSIRPNSQFPLTVYENPTVSESYWANSASMEFSNIAPFNAVIADEYGSSNGNSWVQSAAGTATTIAYDPSGGDTKCQYCGSQLIRKENNEIICAGCSSSRMSFAPRIQPRQTKPKTTTANNNRRNGVSCANCFTTSTTLWRRNNESQPVCNACGLYFKLHNMNRPLTMKKEGIQKRKRKPKLANGAPMRNPLPRQLHETSMENDINMSTAIMTGDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -