Basic Information

Insect: Rhingia campestris
Gene Symbol: -
Assembly: GCA_932526435.1
Location: CAKOBE010000155.1:129030-138177[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.28 39 5.8 3.3 2 21 1023 1042 1022 1043 0.92

2 8 0.26 36 5.9 0.9 1 23 1050 1072 1050 1072 0.97

3 8 0.0013 0.18 13.2 4.5 1 23 1076 1098 1076 1098 0.97

4 8 3.6e-07 5.1e-05 24.3 1.0 1 23 1104 1126 1104 1126 0.99

5 8 2.8e-05 0.004 18.4 0.4 1 23 1132 1154 1132 1154 0.98

6 8 0.00075 0.11 13.9 1.1 1 23 1160 1182 1160 1182 0.98

7 8 0.00057 0.08 14.3 4.0 1 23 1188 1210 1188 1210 0.95

8 8 5.6e-06 0.00079 20.6 0.9 1 23 1216 1238 1216 1238 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.28	39	5.8	3.3	2	21	1023	1042	1022	1043	0.92
2	8	0.26	36	5.9	0.9	1	23	1050	1072	1050	1072	0.97
3	8	0.0013	0.18	13.2	4.5	1	23	1076	1098	1076	1098	0.97
4	8	3.6e-07	5.1e-05	24.3	1.0	1	23	1104	1126	1104	1126	0.99
5	8	2.8e-05	0.004	18.4	0.4	1	23	1132	1154	1132	1154	0.98
6	8	0.00075	0.11	13.9	1.1	1	23	1160	1182	1160	1182	0.98
7	8	0.00057	0.08	14.3	4.0	1	23	1188	1210	1188	1210	0.95
8	8	5.6e-06	0.00079	20.6	0.9	1	23	1216	1238	1216	1238	0.98

Sequence Information

Coding Sequence: ATGTCCTGCACTGCAATATCTACATTTCTCCAATATAACACTCCAGATGCCACTACACACTGTGGTCTAATTTATTGCTCTCAAAATTTGGAGTACTTCATCATACATTGCAATACGTGCTCCCAGGAATTCAATTTGCTTAGTTGCAATTTATTCATAAAACACGTCAAAGAATGTTATTCAGCAATTCAAGATCGATCTCAGAATCAAGAAATTTCCAACTATGCGATTGAAAATTTACTCAAGGATGCTTTCAAAAACAACGCAGCCGATGGCGGCGTTGCTAGTGGCGATGAGCAAATAGATCCATTGTTGGCTTTAAAAGTCGAAATTGGAAAGGAGAAAGATGACAAGAATCCATACCTAGCAAGTGAACATTTGGAATGTGTGGTATCCCCCGCCGATTATAAAGCTGAAGATTGTCTAAGCGTCGACCAAGTGATACATCGCCGCATGGTGGAAGGTATCATTGATGAGTACAAAAAACACTCTATTTTGTGGAAAGCTGTACCAAATGAATCTGGCAACAGTGAATCTGTAAACAATTCATACGACCAAATCCGTTTAGCCATCAACACAAAATTCAAGACAAACTTCACGGATTCAGAGCTGCGAGCACAAATTTGCAATTTATGCTCTGAATATAGGAAAGTATTGGAAAAGAAGAAGGAATACGATGCGAATTGTATTCAAGGTGCCGCCCCATTTGATACGAAATTGTGGTATTTCGAAAAGTTATCATTTATCAATGAAATCAACGAAGAAGCACAGAACCCAGCTGGCGGGACTGATAAAAGTCGCATTCCTAAAATAGAGATTTCCGACGATGATGAGTCCTCTGATTCCACAAATGATAAAACTCAGCAGGGACCAAAAAAGCCAAAGAAGGAACGACCTTATTCCAAAGTATTGAGTGAATCGCCAGTCATAACCGATATAATCTCTCAGTATAAAAAGTATCCATTCCTCTGGGACCAAACGGCATCGCTGTATAATGATAAATATGCACGAAAGGATGCGTTTCGTAAGATAACCAGCTTAATAAATAAGAAATTCCACAAGACTGTCACCGACAAAGATGTAAGGAGGCAGATCGTAAACTTACGGAGTGCATACAGACGTGCACAAAGGAAGAAGCATCGAGCGGATTATCGCGTTAGCTTGTGGTATTATGATGATCTTTCGTTTATCGATGGACGGTCTGATCAATTGGAAGAAGATGGTCAGGTACAAGATGGAAGTACTGCAGAAGGTGCTTCAGATGACGACAACTTAAACAGTCAAACTCTAGGAGAAACCTTTAAGAATGAAATAGTTGAACCATCAGATGATGATAATAATGATAACGGTGATGAAGATGATGACGACGATGATGATGATAATGAAGAACCCGGAGAGAATCTATCTTGTCGCCGTAAGAGTGACAAAAAAATCGTGCTAGCCTTGATTGAGGAGTACAAACGACATCCTTGCTTATGGAATAACTATTTGTACAAAACAAGCAGTCGCTTCGATCGCGTTGATGCGAATAAAGAAATCACATGCGCTATAAATGCCAAATTTAAGAAAAACTTTACAGAATTAGAAATTCGAAATAAGCTTGTCCAGCTTCGAAGCGGTTACAGGCGCGTTCTCAGGAAAAAAGAGGCTTTCGAGAAGAAGCATGCAAGCGCAAAAAGAAAATTCCATTCCGAGTTGTGGTATTTTGAAAAGATGGCATTTATTGGACAGACCGAGACTGATTTCCCAGTGACTCGTAAAAAGAAAACAAAACCCAACAGCAAGAATACTAAGAAAGTTATGGAAGAAGAGGAGGAGGAGGAGGAGGATGAAGATGAGGATGAAGATGATGAAGAATGCAATGCATTGGATGATGAAAGCGAGGGTGATTCAATCGTGGGTACAGATACGTTACAAGAAAACACCATGGATGCAGAAGAAGAACAATCCGACGAGGAGGAAGAGCCAAAGACAAAAAAAAAGTCAAAAACCCTTACAAAGAATAGAGAACTTCTTACAGCCATCATTGATGAGTACAAGAAATTACCCTGCCTATGGGCTGTACAATACTACAGCAACGACAATTCGAATCGCAGAAAAGCTTTCAAAAAGATGGCTACCAATGTGAACGCCAAGTTTAATACCCAGTTTACCTTCAAAGACCTGAGAAGGGAGATTAGCAAACTGCGCGGCACGTACAAACGAACGATGCGTAGGAAACTTGAATGTAAGGATGGCGAGTTCAAAACTAAAATGTGGTATGTTGAGTTGCTGTCTTTCATTGAAAAAACTCCCGATGATATTAAAGACGAACTTGAAATGGATACTTCTCAAAATGATGCTTTTGGAGGCGATAAGGTGTATAAAGAAGAAAGCAAAGAAAACATCTTTGAGATTATTGAACAATTCAAATCTGAGCCAATCCTTTGGGATAACAAACACTATCAGCACCTGATGTGGAGTGAACGTAGGAAGGCAATTGAGAGAATAATTGCTAAGCTAAGCCAAGAGCATAATTGCCATCTGACAGTTGAAGAGTTTCGCTATCAACTTCGTTTCATCAAAGAATCATACTTCCGTGCTGTACGTGATGATGTGGCAATCAAGCAGGGCAATCTGAATACCAAACATGCACCAAAGCCCTTCTTCTACGATAAGATGTCATTCCTAGAGCCATTTGCTGACAAGAACCCATCATCGGGTAAGCAAATGTACGCAGAAACCGACTCAAGCGAAGATTTCACTTTCCTATCAGAGAATAGACCGCTGATGATGGAATTCATAGAAATATACAAAGCCCAGGGTTGCTTGTGGGATGAACAAGACACCGAACGGGACAATCAAGCAGCCCAATCTGATGCGTACGACAAGATAATAAACATGTTCCTTAAAAACGATGTAATTTTCACAAAAGAACAAGTCATGTCGGCCATTGGCTACCTCTACTCGACGGTGGTCAATACCCAGAAACGCTTGGAATCTGCGGACACAAGTGAAGCCAAAGAACCGATTTGGTTTTATGAACACCTAAAATTCCTGGGCAATATACCACGCGACAATGATCTTCATTGCTCGCACTGCGATCAGTACTTCCACACATTGGCTGCGTATCAGAAACATAAGAAAGAAATCAACAAAGACTATCCGTATAAATGTGCCACCTGCAATGCGGGCTTTATGTCGCGTTCAAAGTACGCCTTCCACCAAATTACCCACAAAGAACCTCACAAATGCGAACAATGTGGTTTCCAAACGTTCGATCGGTACAACTTTAACATTCACATGCGCCGGCACAAGGGCATCCATGCATTCCGCTGTGAGTACTGCGAGAAGGGCTTTGTGACGTCAACCGAACTTAATCGTCATCTACGAATGCACACGGGTCATAAGCCATTTATTTGTGATATTTGTGGAAAACAGTTACCATCGAATTCAGACTTCCAACAGCACTTGAAACGGCATCGCAATCAACGAGATCACAAGTGTGAGCTATGTGGCAGCGCCTTTTTCACCCTGACAACTCTGCGCGATCATATGGCCTCACATTCGACTGAGCGACAGCATGTGTGTGAGGTATGCGGTGCATCGTTTAAACGGAAAAAGACGCTCCATCAGCATAAGTCATTGCATATGGAGCGAAAGAAGCACGAGTGCAAAATTTGTGGAAAAACGTTCGCTCAACAGGCAGGCGTTTACTCGCACATGAAGTCACACGGGATGTTGGAGTAG
Protein Sequence: MSCTAISTFLQYNTPDATTHCGLIYCSQNLEYFIIHCNTCSQEFNLLSCNLFIKHVKECYSAIQDRSQNQEISNYAIENLLKDAFKNNAADGGVASGDEQIDPLLALKVEIGKEKDDKNPYLASEHLECVVSPADYKAEDCLSVDQVIHRRMVEGIIDEYKKHSILWKAVPNESGNSESVNNSYDQIRLAINTKFKTNFTDSELRAQICNLCSEYRKVLEKKKEYDANCIQGAAPFDTKLWYFEKLSFINEINEEAQNPAGGTDKSRIPKIEISDDDESSDSTNDKTQQGPKKPKKERPYSKVLSESPVITDIISQYKKYPFLWDQTASLYNDKYARKDAFRKITSLINKKFHKTVTDKDVRRQIVNLRSAYRRAQRKKHRADYRVSLWYYDDLSFIDGRSDQLEEDGQVQDGSTAEGASDDDNLNSQTLGETFKNEIVEPSDDDNNDNGDEDDDDDDDDNEEPGENLSCRRKSDKKIVLALIEEYKRHPCLWNNYLYKTSSRFDRVDANKEITCAINAKFKKNFTELEIRNKLVQLRSGYRRVLRKKEAFEKKHASAKRKFHSELWYFEKMAFIGQTETDFPVTRKKKTKPNSKNTKKVMEEEEEEEEDEDEDEDDEECNALDDESEGDSIVGTDTLQENTMDAEEEQSDEEEEPKTKKKSKTLTKNRELLTAIIDEYKKLPCLWAVQYYSNDNSNRRKAFKKMATNVNAKFNTQFTFKDLRREISKLRGTYKRTMRRKLECKDGEFKTKMWYVELLSFIEKTPDDIKDELEMDTSQNDAFGGDKVYKEESKENIFEIIEQFKSEPILWDNKHYQHLMWSERRKAIERIIAKLSQEHNCHLTVEEFRYQLRFIKESYFRAVRDDVAIKQGNLNTKHAPKPFFYDKMSFLEPFADKNPSSGKQMYAETDSSEDFTFLSENRPLMMEFIEIYKAQGCLWDEQDTERDNQAAQSDAYDKIINMFLKNDVIFTKEQVMSAIGYLYSTVVNTQKRLESADTSEAKEPIWFYEHLKFLGNIPRDNDLHCSHCDQYFHTLAAYQKHKKEINKDYPYKCATCNAGFMSRSKYAFHQITHKEPHKCEQCGFQTFDRYNFNIHMRRHKGIHAFRCEYCEKGFVTSTELNRHLRMHTGHKPFICDICGKQLPSNSDFQQHLKRHRNQRDHKCELCGSAFFTLTTLRDHMASHSTERQHVCEVCGASFKRKKTLHQHKSLHMERKKHECKICGKTFAQQAGVYSHMKSHGMLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01301186;
90% Identity: iTF_01301186;
80% Identity: -