Rcam000500.1
Basic Information
- Insect
- Rhingia campestris
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_932526435.1
- Location
- CAKOBE010000002.1:4378648-4381339[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-93 1.9e-88 296.9 6.6 2 217 269 468 268 469 0.92 2 2 0.34 1.1e+04 -3.1 0.2 78 184 759 777 734 795 0.46
Sequence Information
- Coding Sequence
- ATGTTCACACCCATTAAGAATCTTCTCACCTACATACAGAAGAATGCAAGTGGATCGACTTTTTTCGGAGGAACATCATCAAGCACAGAACTGAACGCATCAGCCACCATGATGGATGGTGAAATAGTTGACTCGAATTCGAGCACCAGTCCCCCGCCACTCACAACAGACTTGACACATATGTGTGATAAGAATCACGATCAGAATGAGAACGAAGTTCTCGAACTAGTCGCCGGAGATACCACGATTAGCGACGATCCCCTGTTGATCCAGGAGGACGAAGGGGAAAAGGATATTTTTCTGGATTTTCCACCCGACACAGAGACCGATGATAACGATGTTGATTTCGCACCCAGTGAAGTGATCGTACTGGAAGATCCCGATTTGAACGCTTCTGTGCTATCCGATGCTGGAACAGATCCTCTGGCAATCGATGATTGCAATGCTCACATGGTGAATTCACCGAATCCCCTGGATACATCAACCGACGGCGATGTGCTGTACATGGTGGATATTGACGAGATTGAGAGTAAAGCCCCTCAAATAAGAGATGACACCGAAGACACAAGTGTGTTGGCAGATGCCAAAACCACCGATGAACAAGAGATTCGAAGTGACGGTTCGGATTCTGGTCTCGGCTCAGAGACATCGGCTCTACAATCAACTGTGACAAGTGTCGCAGATATGAGTACGTCCTCGACAGCGAGTACTTCGCCGATTGTGGAGAAAATTCCTTTGCGGTCGAATTTGAAGCGACGTCTCCAAGACCTTACCGGGGAGAGTGATGAACAGTTGCAAAAGAAGCCCAGACGTTCGATTAATTTCGATGGGGTTAAGGTGTTCTATTTCCCACGTATTCAGGGTCACGGATGTGTTCCATCCCAGGGCGGATGTACCCTAGGCATGGGCGCGCATCATATCAGTTTCAAGACATTTAGTTTGGCCGAGCACGCAGCTGAGCTGAGACGTGCTCACAAGTTGCAACTGCAGGAGATAAATCCACGAGGTTCTTCCAGTGAGGAATCAGACAGCGATGAAGAGCTCACCGAAGGTAGTGGCTCTGACTTGGATGCGGAGACAAATGGTTTCTTACAACCGGTTTCACCAAAACAACGGAGGACATTACTGAAAGCAGCAGGCGTGCGAAAGATAGATCCCAACGAGAAGATAGAGTGTCGAGATATACGAAACTCTCGCGAGGTGTGCGGTTGCGTGTGCCGAGACTTTTGTGATCCCGAAACGTGTGCGTGCAGCCAAGCTGGAATTAAATGTCAGGTTGATCGTGCAATGTTCCCCTGTGGGTGTTCTCGTGACGCGTGCGGCAATGTGATTGGTCGCATTGAATTTAATCCATCACGTGTGCGAACTCACTACATTCACACGATTATGCGACTGGATATGGAAAATCGCCAAGCAAAGCGAACGCACGAACATGCTGCCTCAACATCTCTTATGGTTTACAACACTAACCCCGCGCTGACCAACAGCACAACAGCCATCAACAGCTACAACACCATACCCAGCTATGGAATGGAGCAAAATTCGACAGCTGTTGCTCACGTTTACCATCACCACATGCATCAGCAGCAACCACAGCAGCACAGTGCTTACATTAATCACATGCCACCAGTGCATCCTGTCGGAAGTGTATACACCAATCTGATTGATACGCCGGCGTTACCACTACCGCAACCGCACAGCCACTATGTCAATACCACCGTCACCGAACCAGATAGCATTAGCAGTAATCTAGCGATGAACAGCGGCCACTTGCACTATCACGATGGGTCAATATATCCAGCTGTACAGCCCTCCCCACTGCCGCAGCCACCTGCTGCAGTATATGGCGATATATTAGCACCCTATGCATCATCCACACCATATCAAAGTGCGCCAGTTGTGGAGAGCAACTTCTCGGTGCCGTACACCAGCTACCACAGCTCACATCTTATTCAGAATCATTTACAACCGCAACAACCGTTTTTGGGTTACACCACTGCCTGCAGTGCGGATGCAAATGTCTACAATGAACCCCAAAGTAGCTTTATCAGTTTGAACACACCCGAGGCTAGCTCCTCAAGGCTGTCGGCTATAAATGACCTATTGCATAACAACAGAAACACCACGGCAGCATTGGTTGCCGTTCCATCGGAGTCTGCCGAAGTTTCTCCACCAGATGAGTCATCGGCGATTGAGGTTAATCAGGGGCAGGAGGCTCTCACATTGATTACTGAAGCGGAAGAGGCGGTGGAGAAAGCTCCAATCGAAACGCAGTGCAAAGAAAATGAGAACGTGGTTCAAATTGACCAGAAAAATACGCCCAGTGAATCAACAGACAAATCCACACTAGAACCAGTTCAAGATGAAGCACAACCATTGCCGCCTTCACCCGAGTCTACGCCATCTACCAACGGAGATACTTCCAATTGCAGTTCAAAGAAGGAGCCAACTCCAAATGACACAACCACTGACTCAATCATCAAAGACTTACCACCAATCACCGTCGTCAAACCCGAAGAAGACACAACAACTGACTCAATCATCAAAGACGTACCACCAATCACCGTCGTCAAACCCGAAGAAGACCCCACAACCGAAACACTGCCGCCCATCGTCGAAACAGTGTCCGCCTAG
- Protein Sequence
- MFTPIKNLLTYIQKNASGSTFFGGTSSSTELNASATMMDGEIVDSNSSTSPPPLTTDLTHMCDKNHDQNENEVLELVAGDTTISDDPLLIQEDEGEKDIFLDFPPDTETDDNDVDFAPSEVIVLEDPDLNASVLSDAGTDPLAIDDCNAHMVNSPNPLDTSTDGDVLYMVDIDEIESKAPQIRDDTEDTSVLADAKTTDEQEIRSDGSDSGLGSETSALQSTVTSVADMSTSSTASTSPIVEKIPLRSNLKRRLQDLTGESDEQLQKKPRRSINFDGVKVFYFPRIQGHGCVPSQGGCTLGMGAHHISFKTFSLAEHAAELRRAHKLQLQEINPRGSSSEESDSDEELTEGSGSDLDAETNGFLQPVSPKQRRTLLKAAGVRKIDPNEKIECRDIRNSREVCGCVCRDFCDPETCACSQAGIKCQVDRAMFPCGCSRDACGNVIGRIEFNPSRVRTHYIHTIMRLDMENRQAKRTHEHAASTSLMVYNTNPALTNSTTAINSYNTIPSYGMEQNSTAVAHVYHHHMHQQQPQQHSAYINHMPPVHPVGSVYTNLIDTPALPLPQPHSHYVNTTVTEPDSISSNLAMNSGHLHYHDGSIYPAVQPSPLPQPPAAVYGDILAPYASSTPYQSAPVVESNFSVPYTSYHSSHLIQNHLQPQQPFLGYTTACSADANVYNEPQSSFISLNTPEASSSRLSAINDLLHNNRNTTAALVAVPSESAEVSPPDESSAIEVNQGQEALTLITEAEEAVEKAPIETQCKENENVVQIDQKNTPSESTDKSTLEPVQDEAQPLPPSPESTPSTNGDTSNCSSKKEPTPNDTTTDSIIKDLPPITVVKPEEDTTTDSIIKDVPPITVVKPEEDPTTETLPPIVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01300885;
- 90% Identity
- iTF_01300885;
- 80% Identity
- -