Rcam003506.1
Basic Information
- Insect
- Rhingia campestris
- Gene Symbol
- SMARCC2
- Assembly
- GCA_932526435.1
- Location
- CAKOBE010000024.1:4103371-4108274[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-14 8.9e-11 42.6 0.1 3 44 640 681 638 683 0.95
Sequence Information
- Coding Sequence
- ATGACAACTTTAGGTCCAAAAAAGGACGGAAATCCAAATGTGGAGTTTTTCCAATCGCCGGAATCATTACAAGGATTTGATACAATACGCGTTTGGCTGCAAAAGAATTGTAAAAAATATTTGGCCAACAGTCCAGATCCGATAACAAGTCAGTCACTATGCAATTTACTTATTCAATTTCTCCAGTATGTGGAGGCGAAACTGGGCAAAAACACCACTGAACCAGCTACTACCCGGATACCAATGCGATGCTTTTTGGATTTCAAACCGGGCGGTGGCTTGTGCGTGATTTTCGCTACAATGTTCAGGTTCCGCGCAGAGCAGCGTGGCAAGAAATTTGATTTCTCGATCGGGAAGAATCCTCAGCGAAAGGACCCAAACATTCAACTGATGATTGACATTGAGCAGGCGTTGATTGAAGCTGATTTATATCGGATTCCGTACATCTATATTCGCCCGGAAGTTGACAAGGCTTTAGCAGCACGCATTAAAGACATCCTTTCGACCAGGCGGGTTGAAATTGTCTCCGACGAAGAGGAGGAGGTGACACATGTCATCTATCCCGTGGTTGATCCGCACCCGGATGAGTATGCCAGACCGATATTCAAGCGTGGTGGTAATATTATGCTCCATTGGTATTACTTTCCGGAGTCATACGACACATGGACATTAAACACATTTGATTTGCCCGACAATGTACCGGAGAATCCCGAGTCACCTTCAGGAGTCTGGCGTGTTTCTGCATCGTGGATTCTAGACTTGGAGCAGTATAACGAGTGGATGGCAGAGGAGGACTACGAAGTCGATGAGAGCGGAAAGAAAATGATGCATAAGCTTCATCTTTGCGTTGAGGATCTAATGTCGTGCTCTGGAGATGACAAGAAGCGGTCGGGAAATAAGCAAAAACGTCGTCGATCACCGTCTCCAACGCAGAAGGCTGGCAAGCGAAAGCGTTCTCCAGCTGTATTGCACAAAAAATCACGCAGTGGTGATGGCGAGGATGACGAGGATCTAACCAGAGATATGGAAGATCCACTTCCAGAACCAAATATTCAGGAAGTTATTAAATCGTCGGCAATGCAAAGCACAGCAAGTCCAGCCCCAGCTACCAAGTCAAGGGATAATGACATGATGCCCATAAAGGGTGGAACAATGACCGATTTGGATGACGATATGGAACGCGGTAGTAGTAGCACCGGACAGGTTATTGCCCCGCCTGAGGGAGAAAACTCTCAAACGGGAAAGACCAGTGAGAATAGTAATACACAGGAATTCACCCCGAAGGAGGACATGGAGGACAATGTCACTGAACAGACTCATCACATTATTGTTCCCTCCTATTCAGCTTGGTTTGACTACAATTCTATTCATGTCATCGAAAAACGCGCAATGCCAGAGTTCTTCAACAGTAAGAACAAGTCGAAGACACCGGAGATTTATATGGCATACAGGAACTTTATGATCGACACTTATAGGTTAAATCCTACTGAGTACTTAACCAGCACCGCTTGTCGCCGCAACTTGGCCGGTGACGTTTGCGCAATTATGCGTGTGCACGCTTTTCTTGAACAATGGGGCTTGATTAACTATCAAATCGATGCAGAGCTACGCCCCACACCAATGGGACCGCCGCCAACATCGCATTTCCATATTTTGAGCGACACCCCATCTGGGCTCCAATCGCTTAATCCACAAAAAACGCCACAGCCATCGGCTGCAAAATCCCTACTTGATTTTGATAAGAAAAAGGAGGGATCCAAGGAGGGTGAAGGTGAAAAATCTATTTTACTGACAGCCGGTGCAGCTGTCAAAGTTGAGTCTATCGAAAATGGAGGTGGACAATTCGGTTTGAAATTGGATCAGTACACAAAGAAGCCAGCTGCAATGAAGAACCGTACTGCGGCTAACATGACTCGCGAGTGGACAGACCAGGAGACTCTTCTACTTCTCGAAGGCTTGGAGATGTTCAAAGATGACTGGAATAAGGTGTGTGAGCATGTTGGCACACGCACACAGGATGAATGCATTTTGCATTTCCTTCGATTACCCATAGAAGACCCCTATCTCGAAGACGACGGAGGATTTTTGGGTCCACTTGGCTACCAACCGATTCCGTTTAGCAAGTCTGGAAATCCCATAATGTCAACAGTGGCATTTTTAGCATCGGTTGTCGACCCGCGTGTTGCTGCTGCCGCGGCAAAGGCGGCAATGGAAGAATTCGCCGCTATAAAGGATGAAGTTCCTTCTTCAATAATGGACACTCACTACAAGAACGTCGAGAAACTTAATTCAACTGGGAAATTCGATCCATATGCTGGTCTATCTAACAGCGGTATTGCAGGTACCGGAGCTGACAAAGATGATGAGGATCCTACAAAGCCACCAGTGGCTATGATTATGCCACCGTCAACGTCTCAAGACGAGGAAATGAAAGATCTTTCGAAAAAAGAAGTAACAGCTGATTCTAGTAACCCTGTCTCCCCAAATTCCGACTCTTCCCACCCTCCACCAGATGCAGAGTCTACTAAACCTACCACATCTTCACTAGGTGTCGATGATAAAGAAATTAAAACCGAAGAATCCTCCATGGAGTCCACATCTGGCAGTACAGAAGCCACCAATGGCTCTAAAGAAAACGGTGATGGCAGTCGCAAACAAATTTTCAACGAAGCCAGTTTACAGACTGCTGCTGCAGCCGCTCTTGCATCTGCTGCCGTCAAGGCTAAACATCTGGCCGCTCTGGAGGAGCGTAAAATCAAATCACTGGTTGCACTCCTTGTTGAAACCCAAATGAAAAAATTGGAAATCAAGTTGAGGCACTTCGAAGAGCTTGAGACAACAATGGAAAGAGAACGTGAAGGATTAGAGTATCAAAGACAACAGCTAATTACTGAGCGTCAACAATTCCATTTGGAGCAATTGAAGGCTGCAGAGTTCCGTGCAAGACAACAGGCACACCACCGCCTGCAGCAAGAACAACAATGGCAAGGAAACGCCCCACAGCCACCACCAGGCGCAGCTGGCTCGGCGCCAATTGTTGGGACCACCGGACCAACACCTCCATCATCCAGTGGCGTTACCGCACCAACTGCATCTCAGCCAACAGCGCAACAAACTGGGCCTGTTCCATCGCAGCCACCGACAGTGATGCAAACTCCCGCTGTGTTAGAACCACATTCCCAACAACCACCGCTGCCACAAGTCGGTCCGATTGAGCCCAGTATGCCACCCCAAAATCCTTCACCACCAGTAAATGCAAGCGCTCTTCAACAAACGTCCCCACAGCAGAACCAACAACAGCCGCAGCAGCAACCACCCCCACCGCCGCCAGCACAGCCAGTCATTCCCCCAAGTATCATTCCGATACCACCCTCACCATCGTCCCAAACCTAG
- Protein Sequence
- MTTLGPKKDGNPNVEFFQSPESLQGFDTIRVWLQKNCKKYLANSPDPITSQSLCNLLIQFLQYVEAKLGKNTTEPATTRIPMRCFLDFKPGGGLCVIFATMFRFRAEQRGKKFDFSIGKNPQRKDPNIQLMIDIEQALIEADLYRIPYIYIRPEVDKALAARIKDILSTRRVEIVSDEEEEVTHVIYPVVDPHPDEYARPIFKRGGNIMLHWYYFPESYDTWTLNTFDLPDNVPENPESPSGVWRVSASWILDLEQYNEWMAEEDYEVDESGKKMMHKLHLCVEDLMSCSGDDKKRSGNKQKRRRSPSPTQKAGKRKRSPAVLHKKSRSGDGEDDEDLTRDMEDPLPEPNIQEVIKSSAMQSTASPAPATKSRDNDMMPIKGGTMTDLDDDMERGSSSTGQVIAPPEGENSQTGKTSENSNTQEFTPKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGLQSLNPQKTPQPSAAKSLLDFDKKKEGSKEGEGEKSILLTAGAAVKVESIENGGGQFGLKLDQYTKKPAAMKNRTAANMTREWTDQETLLLLEGLEMFKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGYQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPSSIMDTHYKNVEKLNSTGKFDPYAGLSNSGIAGTGADKDDEDPTKPPVAMIMPPSTSQDEEMKDLSKKEVTADSSNPVSPNSDSSHPPPDAESTKPTTSSLGVDDKEIKTEESSMESTSGSTEATNGSKENGDGSRKQIFNEASLQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQWQGNAPQPPPGAAGSAPIVGTTGPTPPSSSGVTAPTASQPTAQQTGPVPSQPPTVMQTPAVLEPHSQQPPLPQVGPIEPSMPPQNPSPPVNASALQQTSPQQNQQQPQQQPPPPPPAQPVIPPSIIPIPPSPSSQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00672158;
- 90% Identity
- iTF_00312554;
- 80% Identity
- -