Basic Information

Insect: Rhingia campestris
Gene Symbol: ATF7IP_1
Assembly: GCA_932526435.1
Location: CAKOBE010000050.1:1152868-1162386[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.7e-08 1.3e-05 25.7 0.0 2 39 15 52 14 56 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.7e-08	1.3e-05	25.7	0.0	2	39	15	52	14	56	0.91

Sequence Information

Coding Sequence: ATGCCACTCAGTTACAGCACCAAGGAAGACATTCATAAAAATGAAGATAAACTGAGATTAGCTGTTCGGGCGGTAATTGAAGAGAATAAATCAATTAGCCAAACCTGCAAAGACTACAGTGTGGCAAGGTCGACCTTGAAACGTTATGTTAAAAAGCAAAGGGATAGCCCCGGAGAAGAAATTGCGTATCGTCGAGTATTCAGAGGTGCTTCCATGTTCACACCCGAAGAGGAAAAAGAGCTTTTGGGATATCTGTCGAATGAGATCGAATTGTATAAAGGGTTGTCATCGGTTCAAGTTCGTCGTCTAGCATTTCAATTTGCTAAAAAAATTAAGAAAAACTATCCAAAGAATTGGGAATTCAAAAAGGAAGCAAACTATAGTTGGCTAAATGGATTCATGAAGAGGCATCCGTCGATTTCCATTCGTGCGCCAGATTTAAATTCACACACAATGTCAGGGCTATCTGATGATGAAGAGGGAGATGTTATGCCTGATGCAACTGAATTTCTAGACGTGGTTTTGCACGATGAATGTGAGCAAAGTTCCGAGATGGAAGGCATGAATGACGTGGCTTTTGATGAGACTCCAACAGATGAACAAGTAAATTCCAATCAAAGACATTTCCCACAATTCTCAAACATGATGGAGGTCAAACATTCCCCAGCGTCGAAAATGGAATTTCTATCCAATGGACTGGCAGATAATGATGTCGATGATATAGATACGCTCTACGACGATGATGGCACTGACAAGAGTATAACGCCACCTAGTGACGAATGTGATCAAAATGCATTAGTCCTCAATGGCATTGATAAGGATCAGGAGGTATTGTCTTCGTCTCAAATTCTAGACGGCATGGGAATAGATGTGATCAAGGACGAAGTCGACTCCAATGATAAGACAGTGGTAGCAGAGGCAACAGAAACAAACAAGGAGAATGAAGAAGCGGAAGAAGTGAAGTCGTCTGACTTGAATGACGTCGAACTCGAATTGGAAGAAACCCCTACAGAGAAGAATGAAACAGACGCATCCAAAGTGCGAGACACAGGAGATGATCTCGATACTTTGCTGTCGAAAATTAATGACCTGGTCGAGGATTGTATAAAAAAACCCAAGGTAGGAGGTGCAGCTGCCACGGTGGTGGATGAGATCGTGGAAATTCCAGATGATGATGAGATGACAGAAGCGAGCAAATCTAAAGAACCGGAGGTGGAAAATAACTCCCAGGTGAGTGCAGAAGTTATAGTCAAAAGATCAGCATCAATAGAAAAGCCACCTCCGGAATCAAAAGATGCTCCAAAAGAGCAGATGGATATCGACGACGATCTAGGCGATGACATTGTCTGCTTAGATAGTCCTTTGCCAGAGGACAGTAAATTGGATGAGGATGCATTGATGATGGAAGATGACTTACTCAACGAAAGTAAAGAAGATACTCCTGAAGAATCTGAAATTGAAACTGAGAAACCTGCGGAGAAGGAAGGCATTCCCGAAAAGGAAGACATTGCCACAAAGGTAGACGATCCTCAAAAGAAAGAGGAACAAGCAGAAGAGAAGGAAGCCGCGATTGAAGAAGCGGTTGAAAGTACGGAGAATGATGATGAGCAGGAAGTCTTCCTGATAGATGATGACGATGATGATGATGATCTCATAAATAATCCTGAAGCCGGAGAAGAATCTGAGCAAAAGCCAGAGGAACCCAAGGAAAATGAGCATTGTACTGAGAAGGAAATAGAAGCTGCGCTTAATGCCATCTGCAACACTCCCGAATCAGAACAAGAGGCGAAAGCGGAACTCGAAAAGAAAGTGGAGCATGAAGATGATGATGTTGTTTGTTTGGACGACTCGGATAAGGAAGAGGAAACCAATAATGAGACAAAGAAAGATGAACCTACAGATAAGGCCACCTGTGTGGAGAATGAAAACAAAGAATCGGCGGTGGAGAACAAGGTGGAGGAATCCACTGACAAAGATAAGGAAGGTGCAGACAACACCAAGCCAGAGAACAGCGTGGCTGAAAAAGCAGTCGCGGAAATTGTTAAAGAGAAACCTGTCAATGAAGTAGCTGAAAAGTCAGTAGAAGCAGTTGCGGATGACGAACCGATGTTGGAAGATATCCCCAAAAAGCCTGATGGAAAGGAGGTGGATTCAACTGAAACCCAAGCTCCCAAGGTACCATCCGAGCCGGAGAAGGCAGAAAGTTCCACCAAAATCAATCAAAATGACGATATTGTAATATTGGATGACGATGAGGAGGAAGATGCTAACGCCGCACAGAAAGACGACAAGACACCCACAAGCGACTCAGATAAAACCTCCACAGCAACCACATCATCTGAAGAGGAGAAGAAATCCGCAGAGAATACGTCTTCACCCATAGTAACGATCACATCTGGTGAAACTCCGACAGTATTGAAACCATCGACGATTGTGTCGGACAATTCTGACAATGCTCGTGATGGTGTCGAGGAAAAGTCTGATAACAAAGACGAGCCAAAGGACGCACAGAAAGAGAAGAAAACAGTTCCTTCCGAATCAAATAGCAATAGCAGCAGCAGCAACCTCTTAAAAGAAACCGCCAACCAAGAGCGCGATGAGCGCGAACAGCCACCAGCAAAGCGAATTCGTCTTAGTCAGGACGAAGCCAGCAGTCGACACTCCGCAATCAGCATGGACGACACAAAATCCAACATTGTCGATGAAGATGAAGTGATGGAATTCAAAGGTGAAGAGGACAGCAAACCGCTGAAGCGAGTTCATAGCAATGACTCGTTAGCGCCCGACTTCAAGAAGCCCAAGACCGATGAAATAGTCACGAAGGATGTGAAGAAAGATTCTACATCAAAGGATGAGGATGTTAAACCAGAGGAAGTCAAAAAAGACGAACCCGAAACGAAGCCTTACGAGCTGTATCCGCTGCCAAAGTTCGACTCACCACCAGTAGCCGTAAGCTTGGACTTCCTTAGACGGTACAAAAAGAAAATTCACAAGATGACAAGGTATGACATGGAGGATTTCATTCTGCAGAAGATCGTCGAAGCCATCGTCGATAAGAGTACATTCGCTGAAATGCGCGAATACATTGAAAAGTTGGAGAAAAACGTCGCAAGCCATCGCACCAAGCTCGCAGAGTTGACGAAGCAATTCCGCGACCTGGAGATGGTGCACAATCGTGTGCTGAAGGACGTTGAAACAAAGAACTCACAGTTCATCATGCCAGTGAAGATCACTAGAGCAGTTGGTCTGCAAGTTTACTTCCCTAACAAAAAGTGCGATCAGCCACTGGCTCCACCCTCTCCTATCAGTACGCAAACATCGCCAAAGAATGCGAGTGTCAGTACAGCAGTGCCAGAAAAATCCGCAGCTCCAGCGCCTATTGCACCTATTGCGCCAACGACCTCCAACAACAGTACTCAACCATCAACAGTTGTTAACAGTACGGCGGCACCGCCTCAACGGCGTGGATGTGTACAGAAATTGACCCCAATGCGCCCAGATACACCGCGTAATTCTCCGCTCAACCGCAGCACGTCCACAAATTCGCAACCATCACCTCTGGCGGCTGCGGCAAAGGAACCAGTCTCAGTGGTGGGGGCTCCCGTCAAGATACTGAATCGTGGGGTGACAACGAATAGTCGCGTTAATCCACCATCAAATGCCATGGCAGTGGGAAATAATATTCCCAAACCGACGCAAGTACCTACAGCAGCTGTAATACCTGCAGCAGTGCCAAGGCCAACGGGCACACCACCAGGCATTGCTACAAAGAAACAAATTCCTGCCAGGAATAGGAGCTCGATAAACGTGCCGCATAGCTCCCAATCAGATCCAAATCTAGTGTCTCAACCACTTCCGCCAGCAGCAACAGTTGTTGCGTCGCAAATCCCCCCCTCGATGATGCCGAAACCAGCAAACAAATCAGTCATCGATTTGACAGATGAAGACGATGTGGTGCCCACACCAACACCACCGCTTGCCAGTCCCAGGACTCCAGCAGCAGCGCCCACCCCACCATCGGCTTCTGTGGCTGCAAACCGTGGACCCTACAAAGTGTCTGTCATACCGGCTCAACAGTTGCAACAGCCTAGGCCGAATCCACCTAAACAGGCTCCGGGAAGGCCCCCAGCTAAACGTGAGTATTGCTATCACTCTTTCCCCGTGTATCCGATCTCTTTACAGAACATCTCTCTTGCAGTTCCAATTATTGCGCCGAAACCAAATGGAGCAATTATTCCCGTCCGACAGGTGCCGGCAAATCCTGCTAGGTATCGCCATCCTGCACCGCTGCCAAATCAACCGGTTCACAGCAGCAATCCGGCATGGAAGCTGCCACCAGCACGACCCACTATTCGCATCAGTAATCTCGAGAGTGGCATCGTAATCTCATGGACCATCGATGAAACGGCCAAGGAAAAGTACGCGGAGAGTACAAGCTACCAGATCTACGCCTACCAAGAAACCAGTGGACCACCACTAGTCGAGTCGTGGCGGCATGTAGGCGATGTAAAAGCGATGTTATTGCCCATGGCGGTGACACTCACTCAGTTCCAAGAGGGACAGCGCTATTACTTTGCTGTTCGAGCAATGGACGCACACAATCGTTGCGGTCCGTTCAGCTTTGCTAAAACTTGGAGTTAA
Protein Sequence: MPLSYSTKEDIHKNEDKLRLAVRAVIEENKSISQTCKDYSVARSTLKRYVKKQRDSPGEEIAYRRVFRGASMFTPEEEKELLGYLSNEIELYKGLSSVQVRRLAFQFAKKIKKNYPKNWEFKKEANYSWLNGFMKRHPSISIRAPDLNSHTMSGLSDDEEGDVMPDATEFLDVVLHDECEQSSEMEGMNDVAFDETPTDEQVNSNQRHFPQFSNMMEVKHSPASKMEFLSNGLADNDVDDIDTLYDDDGTDKSITPPSDECDQNALVLNGIDKDQEVLSSSQILDGMGIDVIKDEVDSNDKTVVAEATETNKENEEAEEVKSSDLNDVELELEETPTEKNETDASKVRDTGDDLDTLLSKINDLVEDCIKKPKVGGAAATVVDEIVEIPDDDEMTEASKSKEPEVENNSQVSAEVIVKRSASIEKPPPESKDAPKEQMDIDDDLGDDIVCLDSPLPEDSKLDEDALMMEDDLLNESKEDTPEESEIETEKPAEKEGIPEKEDIATKVDDPQKKEEQAEEKEAAIEEAVESTENDDEQEVFLIDDDDDDDDLINNPEAGEESEQKPEEPKENEHCTEKEIEAALNAICNTPESEQEAKAELEKKVEHEDDDVVCLDDSDKEEETNNETKKDEPTDKATCVENENKESAVENKVEESTDKDKEGADNTKPENSVAEKAVAEIVKEKPVNEVAEKSVEAVADDEPMLEDIPKKPDGKEVDSTETQAPKVPSEPEKAESSTKINQNDDIVILDDDEEEDANAAQKDDKTPTSDSDKTSTATTSSEEEKKSAENTSSPIVTITSGETPTVLKPSTIVSDNSDNARDGVEEKSDNKDEPKDAQKEKKTVPSESNSNSSSSNLLKETANQERDEREQPPAKRIRLSQDEASSRHSAISMDDTKSNIVDEDEVMEFKGEEDSKPLKRVHSNDSLAPDFKKPKTDEIVTKDVKKDSTSKDEDVKPEEVKKDEPETKPYELYPLPKFDSPPVAVSLDFLRRYKKKIHKMTRYDMEDFILQKIVEAIVDKSTFAEMREYIEKLEKNVASHRTKLAELTKQFRDLEMVHNRVLKDVETKNSQFIMPVKITRAVGLQVYFPNKKCDQPLAPPSPISTQTSPKNASVSTAVPEKSAAPAPIAPIAPTTSNNSTQPSTVVNSTAAPPQRRGCVQKLTPMRPDTPRNSPLNRSTSTNSQPSPLAAAAKEPVSVVGAPVKILNRGVTTNSRVNPPSNAMAVGNNIPKPTQVPTAAVIPAAVPRPTGTPPGIATKKQIPARNRSSINVPHSSQSDPNLVSQPLPPAATVVASQIPPSMMPKPANKSVIDLTDEDDVVPTPTPPLASPRTPAAAPTPPSASVAANRGPYKVSVIPAQQLQQPRPNPPKQAPGRPPAKREYCYHSFPVYPISLQNISLAVPIIAPKPNGAIIPVRQVPANPARYRHPAPLPNQPVHSSNPAWKLPPARPTIRISNLESGIVISWTIDETAKEKYAESTSYQIYAYQETSGPPLVESWRHVGDVKAMLLPMAVTLTQFQEGQRYYFAVRAMDAHNRCGPFSFAKTWS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01300808;
90% Identity: -
80% Identity: -