Rcam002772.2
Basic Information
- Insect
- Rhingia campestris
- Gene Symbol
- kn_1
- Assembly
- GCA_932526435.1
- Location
- CAKOBE010000021.1:2398812-2414991[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-139 6.4e-135 451.6 0.0 181 385 120 353 116 355 0.98 2 2 4.1e-11 3.4e-07 29.8 12.7 422 512 356 448 352 468 0.77
Sequence Information
- Coding Sequence
- ATGAATTCAACGTGCACGGCGATTGTATTCGAGTTGGCTCATTGTTTGCCGAGCCTTATTCCAATTCAGTATCAGTTCGGTTGGACTATGATGCCCTGGACAGTCGTCCGCGGGAGTTCCTATGATGAGACGGATCAACCATTTTGCCCTGGCAGTAGCGGTGGCGACCGCGCCGGCTGGATAGCAAAACATGAATCAACAATCATAAATATCGAGATCGCGTCACCCTCAGTTCAGTTAATTGTACCAGATGCCTACACCAACAAAGTGTTCAACTATTACGACTCGGTATGGAATCCTGGTGCATATCAAATTCTAAATTTCTCTAAGAAGCACACTCTTCTACATCTACTCAGCTGCAGATTCTTCCTGAAGTTTTTCTTGAAATGCAATCAAAATTGTTTGAAGAACGCCGGCAATCCAAGGGATATGAGAAGATTTCAGGTTGTGATATCAACACAAGTGGCCGTTGACGGACCACTCCTAGCCATTTCCGATAACATGTTCGTGCACAACAACTCAAAACATGGTCGTCGCGCAAAACGGATGGACGCCACGGAAGGTACAGGAAATTCTCCCCTGTCCATTTCGGGTCACCCCCTTGCGCCTGACAGTACCTATGATGGTCTCTATCCTCCATTACCAGTTGCGACACCGTGCATAAAAGCGATATCACCCAGTGAAGGCTGGACCACTGGCGGAGCTACCGTCATCATTGTCGGCGATAACTTCTTCGACGGCCTTCAAGTTGTCTTCGGTACGATGTTGGTCTGGAGTGAGCTAATAACCTCGCATGCCATACGCGTACAGACACCACCACGACACATACCCGGCGTAGTTGAGGTTACACTCTCCTACAAGAGCAAGCAATTCTGCAAAGGTTCACCTGGACGATTTGTCTATGTTTCAGCTCTCAATGAGCCGACGATAGACTATGGCTTCCAGCGGCTGCAAAAATTGATTCCACGCCATCCGGGCGATCCCGAAAAGCTGCAAAAGGAGATTATCCTTAAACGTGCCGCCGATTTGGTTGAAGCACTCTACTCGATGCCAAGATCTCCCGGAGGTACAACTGGATTCAATTCATATGCCGGCCAATTGGCCGTCAGTGTTCAGGATGGAACCGGTCAATGGACCGAAGATGAATACCAGCGAGCGCAGAGCAGTAGTGTGAGTCCACGCGGTGGCTACTGTAGCAGTGCATCGACGCCGCACTCCTCGGGTGGATCCTATGGGGCTACTGCCAACGGCTATGGACCGGCACCGAACATGGGCGCATTGTCATCGTCACCGGGCAGTGTATTCAATTCGACATCAACTAGTGCCTTTTCGCCATTAATCTCAACAGTGTCGTCCCCATGGCATCAAGCACTCGTTCAACATCATCACCATCATCACTCGCATCCGCATCCGCACCATCATCATTCGCATCATCCACTTCAGCCGTGGCATAATCCGACAACAGTATCAGCAACAGCAGCTGTTTAA
- Protein Sequence
- MNSTCTAIVFELAHCLPSLIPIQYQFGWTMMPWTVVRGSSYDETDQPFCPGSSGGDRAGWIAKHESTIINIEIASPSVQLIVPDAYTNKVFNYYDSVWNPGAYQILNFSKKHTLLHLLSCRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRMDATEGTGNSPLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGTTGFNSYAGQLAVSVQDGTGQWTEDEYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATANGYGPAPNMGALSSSPGSVFNSTSTSAFSPLISTVSSPWHQALVQHHHHHHSHPHPHHHHSHHPLQPWHNPTTVSATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -