Basic Information

Insect: Rhimphoctona megacephalus
Gene Symbol: -
Assembly: GCA_963989365.1
Location: OZ022416.1:15033462-15046163[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.4 2e+02 3.5 0.1 1 23 84 109 84 109 0.90

2 20 0.0068 0.96 10.8 4.5 1 23 116 139 116 139 0.96

3 20 0.00011 0.016 16.4 0.4 2 23 155 176 154 177 0.95

4 20 4.3 6.2e+02 2.0 6.6 1 23 183 205 183 205 0.98

5 20 0.0015 0.21 12.9 0.7 2 23 211 232 210 232 0.97

6 20 5.1 7.2e+02 1.8 1.2 6 23 487 504 484 505 0.91

7 20 0.0024 0.33 12.3 2.2 2 21 516 535 515 536 0.95

8 20 2.2 3.2e+02 2.9 1.0 1 23 601 623 601 623 0.82

9 20 0.35 49 5.4 4.1 2 23 800 821 799 821 0.97

10 20 0.031 4.4 8.7 0.1 1 23 837 859 837 859 0.96

11 20 0.01 1.4 10.3 0.6 1 23 867 889 867 889 0.98

12 20 0.097 14 7.2 1.1 2 23 1003 1024 1002 1024 0.95

13 20 0.23 33 6.0 0.5 3 23 1036 1056 1035 1056 0.95

14 20 0.0025 0.35 12.2 0.1 1 23 1133 1155 1133 1155 0.98

15 20 0.035 5 8.6 0.3 1 23 1243 1265 1243 1265 0.97

16 20 3.2e-05 0.0045 18.1 0.8 1 23 1271 1293 1271 1293 0.97

17 20 0.0052 0.74 11.2 2.6 1 23 1356 1378 1356 1378 0.97

18 20 0.0021 0.3 12.4 2.2 1 23 1384 1406 1384 1406 0.99

19 20 2.5 3.6e+02 2.7 2.3 2 23 1505 1526 1504 1526 0.96

20 20 6.2 8.9e+02 1.5 1.1 3 23 1535 1555 1534 1555 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.4	2e+02	3.5	0.1	1	23	84	109	84	109	0.90
2	20	0.0068	0.96	10.8	4.5	1	23	116	139	116	139	0.96
3	20	0.00011	0.016	16.4	0.4	2	23	155	176	154	177	0.95
4	20	4.3	6.2e+02	2.0	6.6	1	23	183	205	183	205	0.98
5	20	0.0015	0.21	12.9	0.7	2	23	211	232	210	232	0.97
6	20	5.1	7.2e+02	1.8	1.2	6	23	487	504	484	505	0.91
7	20	0.0024	0.33	12.3	2.2	2	21	516	535	515	536	0.95
8	20	2.2	3.2e+02	2.9	1.0	1	23	601	623	601	623	0.82
9	20	0.35	49	5.4	4.1	2	23	800	821	799	821	0.97
10	20	0.031	4.4	8.7	0.1	1	23	837	859	837	859	0.96
11	20	0.01	1.4	10.3	0.6	1	23	867	889	867	889	0.98
12	20	0.097	14	7.2	1.1	2	23	1003	1024	1002	1024	0.95
13	20	0.23	33	6.0	0.5	3	23	1036	1056	1035	1056	0.95
14	20	0.0025	0.35	12.2	0.1	1	23	1133	1155	1133	1155	0.98
15	20	0.035	5	8.6	0.3	1	23	1243	1265	1243	1265	0.97
16	20	3.2e-05	0.0045	18.1	0.8	1	23	1271	1293	1271	1293	0.97
17	20	0.0052	0.74	11.2	2.6	1	23	1356	1378	1356	1378	0.97
18	20	0.0021	0.3	12.4	2.2	1	23	1384	1406	1384	1406	0.99
19	20	2.5	3.6e+02	2.7	2.3	2	23	1505	1526	1504	1526	0.96
20	20	6.2	8.9e+02	1.5	1.1	3	23	1535	1555	1534	1555	0.89

Sequence Information

Coding Sequence: ATGTTTGAACGCTCGCCACGACTGCGAGGCCTGAGGCCTCGCACGCAACAACGTTCTCCTCAGACACCTGATCGCAAAAATCAAATGCCTGAGGTAAATGAACCTGAAGATAACGTTAATAAAAGCACCGAAGATCAAGATAGGGACGCAGACACTTCGGAGACTTTGAGCGACGACGAGCTTCACATTGCCATTCGAGATGAACAGGAAGAACCAGTGTCGGATGAAAAATCTGAAACTGATAAAAATTACGAGTGCAAGACTTGCAAAACCCCTGTGGCGTTTCCTACTCTTGTCGAATATCTTCAACATCTCAGAGATGAACACAAAGAAAAGGGTCGAAGCTACGATTGTCCACACTGCGATTTCGTTTGCCAGCATCCAAAAAGTCTTCAAGAACATTACAACTCGGAGCACAAGGACATTGACGAAGCACCCGCATCCGAAGAGCCCACGTCCAATCAATGTACAATGTGTCCTTATGTCGCAACGAATGCGAGCGAATTGGAGACGCATCAACGTGTGCATCATCTCAAGAGACGCTTTTTTCGTTGCACAAAGTGTACATATATGACGCACGTTAGATCACGTTACACGAAACACGTCAAGTATCATTCAATGCCAATGATCAAATGCGACGATTGCGACTTTCGTACACCTTACAAATGGAATTTGGATAGGCATACGCGAAATCACGGCGGAGGTGGAGCCTTTCAGTGCCGAGCTTGTAGTTTTACTGCTGATATTCGTCAAAGTCTTACCGTGCATGAGACGAATCATCATGAGCCACCGGTCGGTCAAGCTCATCGCAGACTGAACACACCTTTCGATCGAAAATTACGAACTGGACCAAAACGATATAATCAGGTAGGAGCTAGTGATTTCCGGGAAAATGAGCAGTCAGAAGATCCTGCGATGTTGAAGGATCAAAGTCCTGGAAAATCGCCGAGCTCCGATGTCGAAGGTAATTCGATGGAGGATAGAAGAAACGCGATTGCCGGGGCTGAGTGCATTGCGTTAAAGTGCGAGGAAAAAGGTTGCCAATTTATTACAGCTTGGGATTCGGAGATGCAGCGACATTTGGCTGAGTCACACGCGCCCTCGTTATCGCCAGTCAAACGTCGTAAACCTATGCCGATGCTTATTCCGCTGAGCCCTGATAGCGACTCGGGCGCGAAGAAAACTGTGACGAACGGACCACGTACTACGCCTCTCAAAGTACCGAGGGTACGCGTGAGACCAGAACTCGCACGTATAGCACGAGATACTGAAATTGCCAAACTTTACAACAATAGAGAGTCCGGTGGAGGAAAAAAAGAAGCTGTGGCTGCTGATTCATTTGAGAAAAGGAATGCCTCGTTCTTCGACAAGCTGAAGGAAAGATTGATGACGACGAGCGCCAGCGTCACGGGTGTATCGCAAGTGGCCGTAAGTAGCCAGAACGATTTAAAGTGTTGGTGTACCTACAAAGCTAGTAGCCAAGAGGAATTGGCGAGTCATAGTCAGACCCATCACACAGCACTGAGTGTATCAGTCGGTATATCGCGCTGCCCTAAGTGTAGAAGGCGTTGTAAGAGTTCCAACGATCTTCAAATGCACATGAATATTTGTCAAACAACGAGCAATGATTTAACGACAGTTGATAGTTGCCTGGAAAATTCGGCAAATAGTACGAATTATGAGGCCCAATCGTACGGTGGTGATTTTGAGTTTCCGTTTCAAGTGGACTGGGACGGGAGTTTTGGAGGACTGAATTCTTCTGGATCGTCGGTCGAGGGCCACACGATCGGACGTCGGGTATTCAAGTGTCCTCATTGTCCATTCTGGGCGTCAACGGCCAGCCGATTTCACGTACACATTGTGGGTCATTTGAATCGTAAACCGTTTGAATGTTCGCTCTGCGCGTACAGATCAAACTGGCGTTGGGACATTACAAAGCACATCAAGCTCAAGGCGGCTAGAGATCCGGCTCACTTGACCGCCAGGGTGCTTATGACTGACGAAACTGGCCGACGTAATTATTCCAAATACAACAAATATCTTGCCCAGCAGGGCACCGAGGAAATTGGATTGGAAGAGGGTCCAGCTGGAGAAGCGCAGATCGACGAGCCACCGAAGAAGGTTTTGATAACTGGTGAAAATCAGGATTTTTCTGGTCCACCGGAACTCACACCCGCTCCAGGTATTGTCGAAAACACCGAAACCAATTCGATGAGCATTTTAACAGCACTGAATCTTCGGCCACCACCTCCACTCAAGTCCGCAAGTAGAAGTCAAGGTCAATCGTTGCTCAAGACAAATCCATCCGCGACAAACGCCGTATCCATTCTGTCGAACAATTCAGTGTCCTCAATCGCCAATGCCAACTCGCAAGAAGAAACTAAGCGAACCCTTTGGAAATGTAAGCGATGTAACTTCCGTTCTTCCCACAAGGAAACTGTACTTACTCATGTCAAAACTCATTACGAGTCGACCGAAGAACTCACCGAAGAGGGCGAAAAGAACGAGTTCACTTGCCCAGATTGTCCATACATTAGTAACGATCCAACAGCCATGGCGATACATCGAATACACCATCGTCCAAATCTCGAGGCGATTTTCAAGTGTTATTTATGCCCATATTATGTCAGTACAaaaaaAGAATTACTCGAGCATGCGAGACTTCACGGGGAAGAACTTGCAGTCGTTCATCAAAGAAATATCGATTCCATTCCCACCGGATCTAAACGAAAAATGTCACAAGCGCAGTCGAAAGATGATGAAAATAGTTCAAAGTCCGAAGTAGCGATCGAGGAAATAATTCATTCGCCAGCATCAGTGAGTCCttcagaaaattcaactccGGTAACGAGCAACATGAATAATTTAACGAGCAACAACAAAAATGGTGGGAGCAACGAGAACGAAAGTATAAGCGCGCCGCCGCTTTTGCTCGATACACGTGCTTTACCAGACACGCCATTAGTCTGGGTTTCACGATCGGATGGAACGTTGGCAAAGATGTTGAAATGTCGTCATTGTCCGTACGTTTCATCAAGACGGGTCGAAGTCCGTGATCACGAAACAATGCACGTGAATTCTTCGAACGTGGGTCCTCTGGTGGCGTGTCCAAATTGTAGTTTTTCGTGTTCACGTCGTGACGTGATGGAAGCTCATGCCGATATGCACACGGGATCATTGGGTACGGTGCACTGTTTGGTTGACGATGGTCGTACGGACGCTCAGCAGCTTGAGGATCTTGCAACGTTACTTGGACTCACGCGAGCGCCGGCTCTCGGTCCTGAGCCCGATTTACGTGATTCTCGATTGGTCTATTGTTGCTCAAAATGTCCAGCCCGTTTCCTGTGTGACAAAGAATTACGAATCCATCTTCGTTACCATTCAACCGAATTGGCTTATTCGTGTGAATGGTGTTCGTACGCAGCGAGACAACCGGCTCATTTGTTAGCTCATCAAAAAGCACATTCCTCCGAGTATCAGGATCACACTCGTTATTTATTGTCGATGTATGGAAATTCACAGCGATACGCACCGCCGAACACAGCTTGTGTCGAGTCGACCGATACGAGAACGCGAGAAAACACGGATGCttcgaaaaacgaaggaaactGCGGCAAAGTCGCCTGGATCGTCGTCGATAACGCGACCAATTCGATTTCGAACGGTTCACAAAATTATTCTACTAACACAACCGAGAATCCAGAAAATCGTGGTGGACATCAAGTGTTCACGTGTGCGAAATGTCCAGCTCGTTATTTCAAGCTCGACGCGCTTGAGTACCACATGACTCTGCATGGTTCGAACAATTGTTTCAAATGTACCGAGTGCGATTACTCTTCGAAAACGGCACAGAATTTGATGAAGCATCAAGTTGTTCATCGTCGACATGGTGAATCGAGCGAACCTTCTGCTAACCGTTTGCAGCAAGAGCAAGATCAGCAACAAACGCAAGGGGGCCAACAGGAACAACATTTGTTGGATCCTCAATTAGGAGTTTCCATAAGGGGTAATCCGAATTTCGTTTATCCGGGAAGTTTGAGGAATGGACGTATCAAAGAGAAGCGTTACAAGTGTCACAAATGTCCATCGGCTtttgaaaaacgtgaacaaTACCGAGTTCATCTTACGTTGCACGGAGCGAAGCAACGTTATCGTTGCGACAAGTGCGACTATTCGGTTAAGTATTATGCAAATTATTCTCAACACGTGAAAAAACATCAGGCGAATGCTCAAGCCCAAGCAGGACGAAGACAAGGTGAGCCTGAGTCGATAAGTATCGATAGTGACAGCGTGGTTGATTCGGATACTCCGGAGAGTCGAAAAGCGTTAAAGAATCGTCGAAAATCGACGATATCCTCGACACCAGCGACGAGCCAAAACCCGGAAAATGGCATTTCCGCGAGCACATCTGTAGGACTGTTGCAGCCTTCCAATCAGGACAAACAAACTGTGCTCCTCATGCAAAGAAAAGGAGCTTGCATCTCGTCCCTGGAAGATAATAGCAAAATTTTACGTTGTCAAGATTGTCCGTTCTCCAATTGTGACAAAGATGCGATGGACTCACACAAACGTCGTCACGGTATCGAAAGAATAACCCCCCCGTGTCCACACTGCAATTACGTGCACCGAAAAGACGAAAACATCGGGGAACACATTAGATTACACTTTACAAGACTCTACAAACCGGAGTCTTATCTCATTGTCGAGTTACTCACCCTCACGATGCGACCATTATTAGACGATAAAAAAGACTCGAAAATTCGTGATAACGAGATTTTGTTTCGGGAATGTAAAGACGGCAAATATTTGCCAACTACCGAAAATAATTTATTGCCGCCCTCAGGATCATCCAGCGTCAATGGATATCAGGAAAGAGTAATCGTCGATCCGAATACAGGTGAGACTAAGCATCGTTATTCCCCGTAG
Protein Sequence: MFERSPRLRGLRPRTQQRSPQTPDRKNQMPEVNEPEDNVNKSTEDQDRDADTSETLSDDELHIAIRDEQEEPVSDEKSETDKNYECKTCKTPVAFPTLVEYLQHLRDEHKEKGRSYDCPHCDFVCQHPKSLQEHYNSEHKDIDEAPASEEPTSNQCTMCPYVATNASELETHQRVHHLKRRFFRCTKCTYMTHVRSRYTKHVKYHSMPMIKCDDCDFRTPYKWNLDRHTRNHGGGGAFQCRACSFTADIRQSLTVHETNHHEPPVGQAHRRLNTPFDRKLRTGPKRYNQVGASDFRENEQSEDPAMLKDQSPGKSPSSDVEGNSMEDRRNAIAGAECIALKCEEKGCQFITAWDSEMQRHLAESHAPSLSPVKRRKPMPMLIPLSPDSDSGAKKTVTNGPRTTPLKVPRVRVRPELARIARDTEIAKLYNNRESGGGKKEAVAADSFEKRNASFFDKLKERLMTTSASVTGVSQVAVSSQNDLKCWCTYKASSQEELASHSQTHHTALSVSVGISRCPKCRRRCKSSNDLQMHMNICQTTSNDLTTVDSCLENSANSTNYEAQSYGGDFEFPFQVDWDGSFGGLNSSGSSVEGHTIGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAARDPAHLTARVLMTDETGRRNYSKYNKYLAQQGTEEIGLEEGPAGEAQIDEPPKKVLITGENQDFSGPPELTPAPGIVENTETNSMSILTALNLRPPPPLKSASRSQGQSLLKTNPSATNAVSILSNNSVSSIANANSQEETKRTLWKCKRCNFRSSHKETVLTHVKTHYESTEELTEEGEKNEFTCPDCPYISNDPTAMAIHRIHHRPNLEAIFKCYLCPYYVSTKKELLEHARLHGEELAVVHQRNIDSIPTGSKRKMSQAQSKDDENSSKSEVAIEEIIHSPASVSPSENSTPVTSNMNNLTSNNKNGGSNENESISAPPLLLDTRALPDTPLVWVSRSDGTLAKMLKCRHCPYVSSRRVEVRDHETMHVNSSNVGPLVACPNCSFSCSRRDVMEAHADMHTGSLGTVHCLVDDGRTDAQQLEDLATLLGLTRAPALGPEPDLRDSRLVYCCSKCPARFLCDKELRIHLRYHSTELAYSCEWCSYAARQPAHLLAHQKAHSSEYQDHTRYLLSMYGNSQRYAPPNTACVESTDTRTRENTDASKNEGNCGKVAWIVVDNATNSISNGSQNYSTNTTENPENRGGHQVFTCAKCPARYFKLDALEYHMTLHGSNNCFKCTECDYSSKTAQNLMKHQVVHRRHGESSEPSANRLQQEQDQQQTQGGQQEQHLLDPQLGVSIRGNPNFVYPGSLRNGRIKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDKCDYSVKYYANYSQHVKKHQANAQAQAGRRQGEPESISIDSDSVVDSDTPESRKALKNRRKSTISSTPATSQNPENGISASTSVGLLQPSNQDKQTVLLMQRKGACISSLEDNSKILRCQDCPFSNCDKDAMDSHKRRHGIERITPPCPHCNYVHRKDENIGEHIRLHFTRLYKPESYLIVELLTLTMRPLLDDKKDSKIRDNEILFRECKDGKYLPTTENNLLPPSGSSSVNGYQERVIVDPNTGETKHRYSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00263855;
90% Identity: iTF_00266025;
80% Identity: -