Basic Information

Insect: Rhimphoctona megacephalus
Gene Symbol: -
Assembly: GCA_963989365.1
Location: OZ022420.1:22488283-22494845[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0058 0.83 11.0 0.1 2 23 877 898 876 898 0.96

2 17 4.9 7e+02 1.8 0.2 3 19 906 922 904 924 0.88

3 17 1.6 2.3e+02 3.3 1.2 2 23 931 952 930 952 0.96

4 17 0.00062 0.088 14.1 1.9 2 23 960 982 959 982 0.96

5 17 0.0014 0.2 13.0 3.2 1 23 989 1012 989 1012 0.98

6 17 0.00061 0.087 14.1 2.1 3 23 1020 1041 1019 1042 0.96

7 17 3 4.3e+02 2.5 1.6 2 23 1049 1069 1049 1069 0.91

8 17 1.4e-07 2.1e-05 25.5 2.1 2 23 1075 1096 1074 1096 0.97

9 17 2.3e-06 0.00033 21.7 0.2 1 23 1102 1124 1102 1124 0.99

10 17 0.0045 0.64 11.4 2.8 2 23 1136 1158 1135 1158 0.95

11 17 0.48 68 5.0 2.6 1 23 1164 1187 1164 1187 0.92

12 17 0.0059 0.84 11.0 2.0 2 23 1209 1231 1208 1231 0.95

13 17 0.00088 0.13 13.6 0.8 2 23 1238 1260 1237 1260 0.96

14 17 4.2e-05 0.006 17.7 1.7 2 23 1268 1289 1267 1289 0.97

15 17 0.0013 0.18 13.1 2.3 1 23 1295 1318 1295 1318 0.96

16 17 0.34 48 5.5 3.2 2 23 1325 1346 1324 1346 0.96

17 17 0.53 75 4.9 1.9 1 23 1352 1374 1352 1374 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0058	0.83	11.0	0.1	2	23	877	898	876	898	0.96
2	17	4.9	7e+02	1.8	0.2	3	19	906	922	904	924	0.88
3	17	1.6	2.3e+02	3.3	1.2	2	23	931	952	930	952	0.96
4	17	0.00062	0.088	14.1	1.9	2	23	960	982	959	982	0.96
5	17	0.0014	0.2	13.0	3.2	1	23	989	1012	989	1012	0.98
6	17	0.00061	0.087	14.1	2.1	3	23	1020	1041	1019	1042	0.96
7	17	3	4.3e+02	2.5	1.6	2	23	1049	1069	1049	1069	0.91
8	17	1.4e-07	2.1e-05	25.5	2.1	2	23	1075	1096	1074	1096	0.97
9	17	2.3e-06	0.00033	21.7	0.2	1	23	1102	1124	1102	1124	0.99
10	17	0.0045	0.64	11.4	2.8	2	23	1136	1158	1135	1158	0.95
11	17	0.48	68	5.0	2.6	1	23	1164	1187	1164	1187	0.92
12	17	0.0059	0.84	11.0	2.0	2	23	1209	1231	1208	1231	0.95
13	17	0.00088	0.13	13.6	0.8	2	23	1238	1260	1237	1260	0.96
14	17	4.2e-05	0.006	17.7	1.7	2	23	1268	1289	1267	1289	0.97
15	17	0.0013	0.18	13.1	2.3	1	23	1295	1318	1295	1318	0.96
16	17	0.34	48	5.5	3.2	2	23	1325	1346	1324	1346	0.96
17	17	0.53	75	4.9	1.9	1	23	1352	1374	1352	1374	0.95

Sequence Information

Coding Sequence: ATGAGCGAATCTATTAAAAACTCGTCGAAGCTTAGCGTTAATAAAAACAACGATTCGGAATGTTTTCACGAGAATTTGATACATGACGAGTCTAACAACGACGATCTTATACGAGATCTCACTTCTGAAAGTATCGTAACCCTCGATGCTGTTGTTTCTGGCAatgaaaaagttcaaattgtTGCTTCGTCGGAGATTCCAGCTGCTGGAAATGTTGTCGGCGGTGATGTGATGTCTATGCAAAATAGTGGCAGTGTCAAAATGACTCCAGATTCTGGGCCAAAACAAGACAAAACATGCCCAAGTTCGACATCAAAGACCGACAGACAAGACCACGACTATAGCGAAGTCCAACGTATCATAACGCCCGAAAGATCGCTCAAAATCTTTGACAAAAAGGCTTGTACGATAGTAAAAAGTAACAATGCTTCATCCCTGACAGCGCCGAAGCGTAAAATGCAAATGCCGATACAAGAGAGGATGATATCTCAggtgaaaaatataaatgatttGAAGAAAGTAACGCCACGAGTGAAGCTCATATCTTCGGAGCCAACGACTTTGGCACAATTGACCAATCCGttgagcagcagcagcagtgcGGAGATAAAAACTTTGTCGAGCCAAGAAAGAATGAggaatcaattgaaaaattattgtcgCACTTGTGCCGGTCAGAAATTGCCTCTTGTTGATATATTCAGCGAGAAAGGAATGCAAATGCGGCTTAACCAGCAAATGAAACATTTAGAAGAGATCAAAGAGCAGGACAGTCTTTCGACACAAATGTGCATGGATTGTATTTGCGATTTGAAAATGAGCTACAAATTTTTCATGCAAATAAAGAAAGCGCAGGTGAAATTGCAGTCGATAAGTTCTTCGGTGCAAGGCAATATTTTGAGTACTATTCGAACGACCAacgaggaagaaaaatcacgtcCGATAGCAGCGCTATCATTGACCGATAGTCCCGAACGAACGACTTATGCAGTAAGAAAATCAGAGAGCGAGAGACcagaattatcaaataaatcttTGAGTTCAACAAAAGTTGTCGAAGAGCCTGAACCgatgatggaaaaaaatgatcaaattgaGTCTCCGATGAAAAACGAGTGCGAAGGAGTCAACGAGTCGATCGTGAACCTGAGCGACGACAACGAATCGATAGAAGAATTCGATCCGGACGATCCGTCCTTTCAGTCGGACAACAGCGAAGAAGAAGTCGATTGCTCGGTggaaaactttgaaaattctcagCTGGAACAAGCCGAAAAAACACAAGATGTCAAAAGCAAAAACCTAATTTCAGTCGTTAGGGAATCAACTGTTAAAACGGAATCGAAAGTCGATCGAAAAGCAGAAACGAACAAAGATGCTAATAAAACGGTTTATCAATATGATGCGAAATTAAAAGCTTATGTCAAAGTTGAGCCTCCGCCCGAGGAAGGATGCAAAGAGGAGCAAGCTGAAACCACGTCGGCCAAGGATAAACAGAAAATTGACAACAAACCAGAAGCAACGGGCAAGGACATAGTGAAACAGCCGAATATCCTCAAACGTAAGATCTCAATACACAAGGATTTTTTAGGGAATCCCGTGGCGTGCGTCAAACAGTCGGATTCGACGCTCGTCAGATCGGGactgaaagaaatgaaaaaatgcaaattagAGATAAAGAAACCGAAGTTGGATTTGAAAAAGCCCATTTTGGATCTAAAGAAGCCATTGCTGGATATAAAAAAGCCAAAATTGGATGTGAAAAACGCTTTGAACGTACCGAGCGAGAACGAGGACGGTATAATGTACGTCAAAGTAAAAGGAACTAAGCCGAATGAGGTGCTTCtcgtaaaagtaaaaaaaatggacaaaggAGCAGACAATAAAAAgcaggatgaaaaaaagaagccGGTTGAGTCGTCGTTGCCAGTTGAGAAACTCTTGAAAAAGCTCGAGCCATCGATTAAAAAAGATACGGAATTTGAGATGGAGCGATCGAAGGAGCTCGACATGAGGGAACGAAAAATCGCCGAACAGATCGAAGAGTACaaaaaaaagcgagaaaaaataTTGGGCGGTAGTTCAGGAACGCCCAATGCTTTGAAGTTCGAGGACGGAACGATACGTTTCGTGAATCCTGTAGAAAAGCCACCGACTCCGGTGGACGATGATTCACCCGTAAAAATCGAGCCGgtcgacgacgtcgacgacatTCGGCACTTCATTGGATCGCCGAAATCTCAACGAATAAAGGAAGAAGCGAATAAAGTGAAAACCGACGACACCGATGCTTACGACAACGCTGGAGAATATTTGACGAGATTagcgagattgaaaaaaaagtgggAAGAAGcgaagaaaaagaaggagaatTTGAAGCGCGAAATCAAGGAATCTTACACCGAGGGAAAcatggaaaaattgtcgcgcgtACTTGGCGAGAGGGAGAAAAACTTGGCTGATTTTCAGAGTTATTTAAAACAGCGTAAAATCATAATAAACCGTTTGACTGACGAAGACGTTATTTCGTTGTACGAGGATCGCAACAACGCGGCGTCGAAGACAAACTTCCCGGATCTCATTGACGCCACCGAACCGGTGGATTACATTGCTGAGGAAGATTATCTCGAGTGCGATTATTGTCCCGAAACTTTTTCACTCCGTGACATACTCGAGGAACATTTGAAAAGCCACGATTACAAGCTCATGTATTGGTGCGAAGATTGCCATTTGGAATTTCCAACGGTCAAGACAAAACGTGCTCACAATGCCGAATGCATCAACAAACTTACTTGTCGTTACTGCCAAATAGTCCTTGATTCCAAGGGCAAAAAGAGGCAGCACGAGCAAAAACACGTCGACAATATGTACGGCCAAATGTGCGACGTTTGCGGTGAAAAATTCAAGCACCAAGCGACTCTCGATCAGCACTTCAAAACCCAACATATGACCTGGGAAAAAATATACCAATGTACGAAATGCCCGAAGAAATTCGCGTTCAAGCAAAAATTGACTTTTCACATGAAATCAGTGCACACTACTTTGCGAGCCTGGCTGTGCGAGGACTGCGGTGCAGATTTCAAAAATCCTGCGAGTTTGCGACATCACCGAATCAGAAAACATCACCCAACTGGAAACAAACGCGAATGTCAAGTTTGCCACAAATTGGTACCTTTTTACAGTCTCTCGAAGCACATGTACACACACAAAGCGTACACGATACAGTGTCCGCACTGTgataaaatgttcaaaaacaGTTCGACTCTTAAGCAACACGTGAGAATACACGAGGATCAACGACAATACAGATGCGACACTTGTGGCGTAGGTTTTAATCGTCGTGATGGATTAAGATTGCACATGAGAGTACACCAAAAGTCTGACAGTCGTTCTCTCAAAGAATGCTCCTGTCAAATATGCTCAGAAAAATTTCCCAACCACTCGATGCTCGTTATTCACAGAAATCGCGTACACAAAGACGGCAGACAATACACTTGTCATATTTGCAATCGTTCGATGTTGTCCACGAGATCACTCGAGTGGCATATGTCCCATATTCACAACGAAACTATGCCCGGCGACATCAAACAAGAGACTGAAACGCAACCGGAAAAGAAGCGGGTATCCTGCGTTCATTGTGATAAAACATTTAAAACTGAAATGATATTAAGGACTCACATTAAAAACACACATATCGAAAAGAATCCTACTAAATGTTTGGACTGCGATGAAATGTTCACGTCCGATGTACGACTCAGGCATCACATGATGATCGCTCACAACAGACTCGAGGGAACACTCACTTGTCCACATTGTCCGAAACGTTTCGTCAATCAATTGCGTTTGAAAACTCACATGATTTCACACTCCGAGGATCGTCCTTACACCTGCGAAATCTGCGGCTTTAATCTCAAGACTAAAATCCAATTGATCAAACATCATCAGAATCGACACAGCGATGAAAGACCTCTTCAATGTCGCTACTGCCCTTGGAGATGCAAACAAGTCAGTGCTCTCGTTTGCCACGAGAGAACTCACACCAACGAACGCCCCTATTCCTGCATCGTTTGTCGACAGAGGTTCAAGTATCTCGGCGATAAAAACAAACACGAACGACGGCACGAGAGCCTCGGTGGATCAGGATTCAAGAGAATCGTTGCTGGCCGAAATGTCAAACAATCCAAACTTCAAACCGAAGAAACGTCCACCTCCGAACAAGAACAAATCGATTATGAAAATCAGGATGAGGAAGAACAACTCATCGAAGAACAACAGTCCGAAGAATGCACTGATGAAAAATACGCTGAAGAAGAAATCGTGAAATTCGAGTCCGAAGAAATTGGCGAGGAGTATGAACAAAATTACGAACAGGAATACGAAGAGACGTCGAGAGAAGCTTCGGACGCTGCCGAAGTAATAATGAACATGGAAGACACGACGGTATATACAGAAGAAGTTACGGCGGACAATGTCGAGACAGCGGAAATGATAACGGACGAAATGATAACGGGTGATATGTTGCAGCCGGAAATAACCGTCGTACATTTACAGCAGCAAGATGACTCCGGTAAAATTCAAGTTATACCAGTAATGCTGTCGCTTCCTGATTTGAGTGACTCGAGCGCCGAGGTGAATTTAGCTACTGCGTCGATAATGTACAATAATTGA
Protein Sequence: MSESIKNSSKLSVNKNNDSECFHENLIHDESNNDDLIRDLTSESIVTLDAVVSGNEKVQIVASSEIPAAGNVVGGDVMSMQNSGSVKMTPDSGPKQDKTCPSSTSKTDRQDHDYSEVQRIITPERSLKIFDKKACTIVKSNNASSLTAPKRKMQMPIQERMISQVKNINDLKKVTPRVKLISSEPTTLAQLTNPLSSSSSAEIKTLSSQERMRNQLKNYCRTCAGQKLPLVDIFSEKGMQMRLNQQMKHLEEIKEQDSLSTQMCMDCICDLKMSYKFFMQIKKAQVKLQSISSSVQGNILSTIRTTNEEEKSRPIAALSLTDSPERTTYAVRKSESERPELSNKSLSSTKVVEEPEPMMEKNDQIESPMKNECEGVNESIVNLSDDNESIEEFDPDDPSFQSDNSEEEVDCSVENFENSQLEQAEKTQDVKSKNLISVVRESTVKTESKVDRKAETNKDANKTVYQYDAKLKAYVKVEPPPEEGCKEEQAETTSAKDKQKIDNKPEATGKDIVKQPNILKRKISIHKDFLGNPVACVKQSDSTLVRSGLKEMKKCKLEIKKPKLDLKKPILDLKKPLLDIKKPKLDVKNALNVPSENEDGIMYVKVKGTKPNEVLLVKVKKMDKGADNKKQDEKKKPVESSLPVEKLLKKLEPSIKKDTEFEMERSKELDMRERKIAEQIEEYKKKREKILGGSSGTPNALKFEDGTIRFVNPVEKPPTPVDDDSPVKIEPVDDVDDIRHFIGSPKSQRIKEEANKVKTDDTDAYDNAGEYLTRLARLKKKWEEAKKKKENLKREIKESYTEGNMEKLSRVLGEREKNLADFQSYLKQRKIIINRLTDEDVISLYEDRNNAASKTNFPDLIDATEPVDYIAEEDYLECDYCPETFSLRDILEEHLKSHDYKLMYWCEDCHLEFPTVKTKRAHNAECINKLTCRYCQIVLDSKGKKRQHEQKHVDNMYGQMCDVCGEKFKHQATLDQHFKTQHMTWEKIYQCTKCPKKFAFKQKLTFHMKSVHTTLRAWLCEDCGADFKNPASLRHHRIRKHHPTGNKRECQVCHKLVPFYSLSKHMYTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHQKSDSRSLKECSCQICSEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMLSTRSLEWHMSHIHNETMPGDIKQETETQPEKKRVSCVHCDKTFKTEMILRTHIKNTHIEKNPTKCLDCDEMFTSDVRLRHHMMIAHNRLEGTLTCPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCIVCRQRFKYLGDKNKHERRHESLGGSGFKRIVAGRNVKQSKLQTEETSTSEQEQIDYENQDEEEQLIEEQQSEECTDEKYAEEEIVKFESEEIGEEYEQNYEQEYEETSREASDAAEVIMNMEDTTVYTEEVTADNVETAEMITDEMITGDMLQPEITVVHLQQQDDSGKIQVIPVMLSLPDLSDSSAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00829002;
90% Identity: iTF_00265965; iTF_00266697;
80% Identity: -