Rmeg009224.2
Basic Information
- Insect
- Rhimphoctona megacephalus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963989365.1
- Location
- OZ022415.1:45993213-46012929[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-17 1.3e-14 54.4 0.1 1 45 599 644 599 644 0.96 2 2 2.6e-17 2.3e-14 53.6 0.0 1 43 1053 1096 1053 1098 0.94
Sequence Information
- Coding Sequence
- ATGTTGGGAAAAAGAAAGGGGGAAATAAACACTTGCGGTGGTGTCGCAGGTCTGGAACGGGTAGCGGAAGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCAGCACTCGGAGCGAATCAGCGAATCAGCCCCATCATCATCATCGGCTGTATCCGGGTACTGCTCTTTCGAGTTCTTGCAACGTCGTAACGGTaggtggtggtggtgttggaggaggaggaggcggaggaggaggaggaggaggagggagCATTGGTCAGCAGGTGGTGGCTCAACGTCCGCCATCGGTGATCGGGGAAATCGGTTTGGTCCAGGGAGCTTCGACGATCGAGGTAACCTCGTTGTCGTCAACGTCATTGGGTACGTCAAACACGACGACAATATCATCTTCAACGGGTACAACGACGAGCTCGAGTATTCTAAGAACGGAAACGTCAACGACAACAGCTGGCAGCATCTCGTTGATGAACGATTCGCCGTCggcaacgacgacgacgacaacgccgacggagaaaaaattaaattgtttgCAACAAAGAAACTCGTTGAATCAATTGTCGAATCATCGTGGAaatacgaacgacgacgacgacgaagaagacgagAAAAACCTCAACGAGGATCACGAGGACCACGAAAATATAAATCTTCAACAATCCTCTCGTCTCAGGCCCGAAAGTATAAAGCTCGAGATCGACGAGATCAACGACTCGTTGCTCAGGGAATCTCATCCTGGGACCTGCGTTATCTCAAGGCCAACGAACAACAATATACAGGAACAATTAACTACCTCCCGAGGAAAAATCATCAAGCACGAGGGACGGGAATACGCGGAAACGGAAAAAGGGGAACGCGATCGTATCGAAGATATTCATACCGATTCGTCCGAAAAGAGATTGAAGATACTCGAGGATTCGTCCTCACGACAGAATTCCACTCGACAAACAACCGGACTATCTCCGGTTCTTGTCAGCCCACTCAGGGAAAACGAGACGAGAACATCGTCCAGAGAACAGGAGACTGGAACGAACGATCTCGTCGATACGATAGGGAACAAGCAGACGGAGGAACGGATAGAAGGACCGACGACCGGTCTACTGAGGGTAAAGAAAGAGGAGGAACTCCAGGAGACGCCGCGCTCGATAAGCTGCGGTGTCGATGCTTCGAGCATCACGAGATTAGGAAATATCGTCGATACGACCAATTCAGAAGTTTACAAAGTTACGGAACAAACCGCCCTCGATACGGGCTTACCGTATCTCGTAAATCGACGTACGAGCCCACCTCCCGAGGACTGGAAGCCACTCGACAAGTGTTTCTTTTGTCTAGATGGAAAACTTCCCCACGACGAACAGCCACCCCTTAGTCCTCAAAGCGAGAGTAGCAGTAGTTCACGATCAGCAGAGTCACCGATGTCGGTACAGGTTGATCCTATGGCGGCTTCGGTTGTCGCTGCTGCCCTTAGCGGTACTTATCCGACTCTACTGCCACAGTGGTGTCTACCGCCGAGGGAATCACCCCTCGTCGCCGTTCAGAGCCATCAGGATGGCTCGTCCGGAGTCGATCAACCCCTCGACCTTTCGGCCAAGCCGAAAAATTTTCAGgACAACCATGTGACGATGGCGAAGCAACAAAAAATACCTCTGAGGATGCCAACGGGCATTGATCCCAAGAGCATCTTCACCTCGTCGTATCGTGCAAAGCCACGAATGACCGGACCAGTGGGTGTCGGTGGTGTTCCGGTGGTTGGTGCTGGAGGGAGTAGGAGAACGTACACCGAGGAGGAGCTCCAAGCTGCTCTGAGGGACATACAGAGCGGTAAACTTGGGACACGTCGAGCGGCCGTTATCTACGGAATACCAAGGAGCACTTTACGGAACAAGGTGTACAAGCTCGCGATGGAGCGTGAACGGGACGCAACCCTGAATAGCACCCATTCACACCCCCTCGAGTCCGGTGCCCAAGCCTCAACCACCACCatgacaacaacaacaacatcaacaacaacaacaacaacaacaacaacaacatcaacatcaacaacaacaatatcAACAACAAGAACAACATCAACAACAACACCATCACCAAATACGATCCAAAACGCCTCCGCAACCACTCCGCCCCCGCAAGTGGACGAGGTTGAGGATAAGGATCTTTCGGGTGCGGAGGAGGAAAAAGAAGTGGAAAAAGCACTGCTTAGGCCTCTGTTGTCGCTCGAAGATCTCGTCAGGTTTTCTGCTCTCGAAGGAAGCGGCAGCGATTCCTTAAGGTCTCTGCTACAAAGAGGTCAAGAGACTGGAACTGAATGGCCCGGTTTCGAGCACGCAAACATTGGGCCTTACATCCAAAAGATGCTCGGAGCTGCAGCGCCCTTTAAGGGTTTAGAAACACCGGATTATAGAATTCCGGAAGTGATGAGGCGATTGATGAGTGAGGACAAGAGGCTGAACAAGGACGTAAATGGCGACCATATGCAGCAGCTTCATCAACATCATTTGCATCATTCGcagcatcatcatcatcatcagcatcATCAATCGCCTCATCATCAAGCGGTGCAGCAGGCACAACAACAAATGGGCCAGCAATCGGGGCAGCACAGAGGACCAATAACGAACGAGGATTTCAATCCGAGTATAGAGGAGGAAGCAAGCGACAGCGGCCAGGGCAGAGCGATATTAAAGATTCCGTCCTACAAGCCGGCGAGCAGTACACCGGGTTCGAGCAAAAACAACGGGGAACCAAATTCGGCGGCGTTTGCTCAAAGTTTCGCGGCGAGCGCGGCCGGAAGTCCGGTACTTTTGGAACGCACGAGTCCAGCATTTTCCGGGACGAGCAGTCCAACGAATTCGATCGTTGGTAAAGGCGTTGGCGTTAATTTTCGTGACGTTATCGCTAAAAGCATAAGCGTCAAGTTTCAAGAGGGACAATCGGGTCTCGGTGGACAAACCGGTAGTATGGTTCACAGTCCAACGGCTATGATGACCGAGGGTAACCCTTTCAAGAGGGGAAGATACACCCCGCCACAAACGTCCCAATCCCAGCAACCCAAACCACAATCTCAACAGGACAAATCCAAACCGAACGCTGGTGGCAAAGGCACCAGACCTAAGAGAGGAAAATACAGAAACTACGACAGGGATAGCCTCGTCGAAGCCGTCAGAGCTGTTCAACGAGGCGAAATGAGCGTACACAGGGCTGGTAGCTTTTACGGCGTGCCCCATTCTACCCTTGAGTACAAGGTCAAAGAGAGACATCTTATGAGACCGAGAAAGAGGTGCAAACAGATGGGTAAGATCATAAAGGACCTCTTGGCGGAAGCGGAACAATGGAAAATGTTGAGGTACAGGAACTCGGTACAATGGAAGGACGAGAAAGATGAGATGCAAGGAGAGCTAGAAAATTGGAAGGAGAGGGCCCTGCGTAGAGTAAAGGAACGGGACCGAGGGAAGCGTGACATCGAGAGAGGAGGCGAAGTACAGGAGCTCAATGGAGGAACTTCAAACGGAATCGTCGATAAGTCGGACGGTGACTCCGTAAAAGTGAGAAGGAAGAAAGATAAGAGACAGAACAACAGCGCAGAGCCGGCTCCACTGACGCGATCGGAATGGAAGTGGGAATTAGAAGAAAgaaggaagaggaagaaaaacATAAAAGTATGGGGCGTAAGTAACAGGGGAAATAAGCACGAAGTGGCACGAGAAGTACTACGAGAAGAACTCTTGGGGGCGAGACTGGGAATGTGCCCGAAGATCACCGAGGTCTTGCCACTAGGAGGCGGTCCGGTGGTGACGATTGAGTCAAtggaagataaaaaaagaataatgagGAGAAGGAAGGAGCTCGACGGACTCGGAGTCAGGCTGGACGACGATCTAACGACACGGGAGAAAGGTCGACAAATGGATCGACATGAAAGTAGACCAAATACGAAGGACTGGAAGTAA
- Protein Sequence
- MLGKRKGEINTCGGVAGLERVAEELMGRRRWKQYQDTLYSSTRSESANQPHHHHRLYPGTALSSSCNVVTVGGGGVGGGGGGGGGGGGGSIGQQVVAQRPPSVIGEIGLVQGASTIEVTSLSSTSLGTSNTTTISSSTGTTTSSSILRTETSTTTAGSISLMNDSPSATTTTTTPTEKKLNCLQQRNSLNQLSNHRGNTNDDDDEEDEKNLNEDHEDHENINLQQSSRLRPESIKLEIDEINDSLLRESHPGTCVISRPTNNNIQEQLTTSRGKIIKHEGREYAETEKGERDRIEDIHTDSSEKRLKILEDSSSRQNSTRQTTGLSPVLVSPLRENETRTSSREQETGTNDLVDTIGNKQTEERIEGPTTGLLRVKKEEELQETPRSISCGVDASSITRLGNIVDTTNSEVYKVTEQTALDTGLPYLVNRRTSPPPEDWKPLDKCFFCLDGKLPHDEQPPLSPQSESSSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPRESPLVAVQSHQDGSSGVDQPLDLSAKPKNFQDNHVTMAKQQKIPLRMPTGIDPKSIFTSSYRAKPRMTGPVGVGGVPVVGAGGSRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDATLNSTHSHPLESGAQASTTTMTTTTTSTTTTTTTTTTSTSTTTISTTRTTSTTTPSPNTIQNASATTPPPQVDEVEDKDLSGAEEEKEVEKALLRPLLSLEDLVRFSALEGSGSDSLRSLLQRGQETGTEWPGFEHANIGPYIQKMLGAAAPFKGLETPDYRIPEVMRRLMSEDKRLNKDVNGDHMQQLHQHHLHHSQHHHHHQHHQSPHHQAVQQAQQQMGQQSGQHRGPITNEDFNPSIEEEASDSGQGRAILKIPSYKPASSTPGSSKNNGEPNSAAFAQSFAASAAGSPVLLERTSPAFSGTSSPTNSIVGKGVGVNFRDVIAKSISVKFQEGQSGLGGQTGSMVHSPTAMMTEGNPFKRGRYTPPQTSQSQQPKPQSQQDKSKPNAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRCKQMGKIIKDLLAEAEQWKMLRYRNSVQWKDEKDEMQGELENWKERALRRVKERDRGKRDIERGGEVQELNGGTSNGIVDKSDGDSVKVRRKKDKRQNNSAEPAPLTRSEWKWELEERRKRKKNIKVWGVSNRGNKHEVAREVLREELLGARLGMCPKITEVLPLGGGPVVTIESMEDKKRIMRRRKELDGLGVRLDDDLTTREKGRQMDRHESRPNTKDWK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -