Rmeg006128.1
Basic Information
- Insect
- Rhimphoctona megacephalus
- Gene Symbol
- JARID2
- Assembly
- GCA_963989365.1
- Location
- OZ022414.1:65466335-65474353[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.57 2e+03 0.0 0.3 39 83 140 186 138 188 0.69 2 2 8.6e-23 3e-19 70.0 0.0 6 89 1396 1477 1392 1477 0.94
Sequence Information
- Coding Sequence
- atggTATTGGGGAGAAATGACAAGAGAAAAAGGAAAGAGGGCGATCTCGTGGATCTCATGGATCCACTGTCCGAATCGCCAAAAAGAACAAAAGTTCACGCGCAGAGAAAATTTGCCCAAGGAGCGGCGACGGTTTTCAGTCCGGCTCCTCCGTTGGtcaaagaaaaggaaaaaacaaaatcCGCAGTTGTGACCGAACTAATAACGCACAAACGACCGAATACCGAAGATTTTCTCACCTTTCTCTGCTTTcgtgGAACATCTATACTGCCGCCGAGTTTAAATTTCTTCAATGTTGGTTCTCGAAAGGATAAGACGGAGGGTAAAGGCGGTAGCGTTGCCAAGTCAGGGACAAAAGCGTCGAGTACATTGCCTTCGGGGACCAACGGGTCCTCGGGAAAAGGAGAATCGAGCGGAACTGTTCAGAGCAAGGGCGGAGCGAAGAGTTCAACGACAACGATGAAGAAAAAAGTGGTGGGGAACGTAGTGCCGACGACGCTGAGTAAATACAAGAACACGACGTTGACGGTGCAGgcgttgaagaaaaaatatcaagagCAACGTTTGGCGAAGCAGCGAATAAAGAACAAATTGAAAGCGTCGTGCGTAATGAGAACTCGTTCGTCGACGGATCGTACGTTGCACAAGAGCGTTCCAAAAATATCACCAAGGAAATTCGTCCCTCGAACTGAGAAAAAGCGACGAGATGGTTTGCGAAGCGGTGGATTCGTTGACAAGTCGAAAAAAGTTATTATTTcgaggaacaaagtaacgaaaagTTTGGCAtcaaaaacaaagaaaagaCTGAGCGCGAAGGAAGAATCGAGCGAGTCCGAGGATTCGGAAACCGCCTCGTCCGAAGATGAGGAGGAATCGAGACAGAAAAATAATACAGCGCTAATACGGAAAACAGCGACGAGCACGAAAACAATCCAGAAGAAAATATGCACGAGAAGTAAGTCGGAAATGAGAAGAATCACGAGATCTCAGAGGGAAAGTTCGACGATTAAACAAGCCAGTTTGTCGAGAAGACCAACGAGAAAAACGAAAGAGGCAGCTGCTGTTTATATGGAAATATTGGGACGAAAACTGGTGAGTCCGGAGCTTGAAAACGAAGATAATATTTCGGTGGACAGTTTCCCTGAATTGCCAAATGCTCGACGCACTGCTCAGGCGGAGAATGAAATGAGGGCGAAAACGaaagcggcggcggcggcggcggtggtGGCAGCGGCAGCGGCAACAACGGCGGTGATGGCTAATAAGAGCGGCAAAGAAACAAAGCAGAAGGACCCGAAAAACGAGGAAAATATTGCCAGCAGAACGAGAACCAAAccagaaaaagtaattctgaAGAGTAAAAGGACACTTCGAGTTAGGAGATATTGTGAATTGGACAGCGAAGACGATTCGGAGAGTTCCGTAGAGCCGGAAAAGCCTAGACAATCGACGCCACGTCGGATCCCAGCCAAAATCGAGAAACCCTCGCCCCGAAGTCTGCGCTCCTCTTCGAGGAATCAATCAGCGAAACCGGAAAAAGTGAGTGTCAAAAGGACGAGAGAAAAATTGGTCAAGCGTCCGAAAGTAGTGGTAAAAAGggtggagaaggaggagggGGACGATTCCGAGGAGGAAGAATCGCTGGTAAATCTGTTGAACAAAATGAGCAAGAAAAGGGAGGAAAATGGTGCGAAATCGGCGAGTAAAGTtgaacagcagcagcagcagcagcagcagcagcagcagcagcagaatCTAACCGAGAGGAAAGAAACGATATTGGAGACGTCGGAAAACACGAGACAAAAAGAAACTCCGGTCGCGTCTCAAGTCTCCGACGACGAGGAATCTTTTCGAGGATTCACGAAAAAAGCGATATCAAAAGTTCTGAATTCCTGTAATTCTCACGCAAGTGCGAATCTTTTGGCGAGCGAAGAAGCCTCTTGCAATCTCGAGTCGAGCCAAGAAACTCGGAAAATCGAAATTGGCACAAAATCGTCGGAGAAATCGCTCGAAAAATTGGTCATCGATGATTCATCGAGAGACTTGGGAATTTCGAGTGTAAAATCGTTTCAGGAGACTACGATCGTCGCGAATATTCAAGAGGAAAATTCTTGTGTCAAGGCGTCGACGAAATTGGAGGAAAAATGCAATCACGCAGCGTCGAACgaagcggcggcggcggcggcggcgacggcgacggcgacaACGATAAATCTTATGGATATGCCGTTAAGCGGTGTTCACGGTCGTAAAGCGCGGGTCAACATGTCGACGGAACAGATTGAAAAATGGTTGAACGATAGTTCGATGGCGCGTGAAAAATCACGAGAAAAATCGGACACCGAAACATCGACGAATTTTCATTTCGATGTGCCAGCAGCGACCAAGATGAAATCCGAGAGTAGTAATCATTTGTCGATACCAACGAGAATTCAACATCTCGTACGTCCGGTCAACGTGACGATACCAAAATTGGTGGAAAAATCGTTGGCCCGAGAACGTTccaacaacaaaaataataagaaaataatcacgaATCTGGTGGAACTCGAGCGTTTTTCGAGTCTGACGAAACAGTTGAATATTCCAGCGCCGAATAGAAACAAAATAAACGCGgatataaaagaaataataaagggCCGAAGCGTTAAAGGAACGAGGGAAGAGAGATCGACTGGAGAGGAGAGCAGCGACGGTGTTTCGAAATCCGACCAAAATTCCGTGGACGGTTCGTCGCTGGAGAAAAAATTGACACCCGAGAAGAAGTCAATATTTCAACAGCGAAAAACATTTTTGCCAAAAGTTAAGGAACGGAAAACAACGATTCCAAGCGCGAATGCGTTTTCACCGGAAAACGAGAGCAGCGTTTACGCTTTTGAGAGCGACACGGAAATACCGATAAATACACCATTTCGCAGGAAACTCAAGGAACAAGCTATCAAGCCAACTTCCGGAGAGTCGGAAATTTCGAGACCGGAAGTCGTGGAGAATTCTTTGGACAAATTCCTAGTTCCCAAGAGTTTTCGAAATTTGTCTCAGATGCAAGTTTTGCCTTTGGGTAAAATGCCAGCCGAATGGAGTGGCATTAATTGTAGTGCTTCGATCGCTGTACAGGTGAATTTTGACGAGCAGTCACGAGAAATTCAGGCTtcgcagcagcaacagcaacaacaacgaCAAACGACGGCGGTCGATGATAAATTATTAGGGACAGAGGATAATTCGGTGGTTCGGGataaggaggaggaggaggtggtTATTGGACAACAAAAATGCACGGAAATATCGACGCAAACGGAAAACACGAATGAGAACGATAACGAGAACGACAACGATGGCCACGTTTTTTATATACCGTTGCAAACCGTCGGTAGAAACGGACCGAATCTCGTTCAAGGTCAACAATTGATACAAGGAGTCGCCGTTAAATTGGGCACCGAAGGTCCCAACGGTCCCAATCAGAGGGTCTTGTTGAGAGCTCAATTAGTTACGAAACCCCCTATGACCGTTGCTCGATGCCCTCCCGTTGGTACCGTCCAACCCACAACTCGCAATCCACCTAATTCCTCGAGCTCTACCACTTCCGTTCTCGATCATCCCTACGCCGTCCTCGATCCTACCCAACAACAACAACCCTCCACTTCTACCAATTCCAACGCTTGTCCACTTCAAATGATTACGGACTCTACCGTTCCTCGGAATCAAACTACACCGAGTTCTACCCCAACCAGCAGACTCGCTTCCCACCTCACTGCCAATGAAAAGAATGCTGCTGCTGGTGCTGCTGCTACTACAACAAAATCACCGAAAAGTGCACGTGAGAGAAAAGCCTCGGTTGATTCCACCAAAACTGCCAAAAGagTTTCAGCAAAATCAAGACAAAAAATGTCGGAAATCTTGTCACCGACTAACGCGACAATATTTCCTGGCTCGACGAATTCGACGAACGCGGAAGCGCGTCTCGTTGAGGCGCCGACTTTTCATCCGACGGAAAAAGATTTTCAGGATCCTCTCGAGTATATCGACAAGATAAGATCGATCGCTGAGAAATTTGGTATCTGCCGGGTCGTACCACCGGCCAATTTCAAGCCAGAGTGCAAAGTTTCGGACGACATGCGTTTCACAGCGTACAATCAATATGTCCATCGCATGCTTCATCGTTGGGGTCCAAATGTCAAGGAAATGATggctattaaaaaatatcttgcAACACAGAGCATAACCCTTACTCATCCTCCATggATCGGTGGAATGGAAGTGGATTTGCCCCACTTGTACCAAACGGTCCAGAGTCTCGGTGGTTTGAAGGAagtgattgagaaaaaaaaatggcaaaaagttGCTGACGGTATGAAAATACCAAAATCTGCGCAGGATCGTGTAACCAAACTCGATGATATTTATTGCAAATATTTATTACCCTATGACACTTTATCGCCAGAGGAACGAAGCAATCTCTTCGACGACGTGGAGGAGGAttggaaaaagagagaaacaaaGACTTTACAGAGGCTCGATGCTCAATCGACCGACAACGATGATGAGGAAGATGACGACAGTTCGGACGAGATTGAAGAATGCATTATTAAAGGACGAAATATGCCGTTGAATGCTTTTTATCGGATCGCACGAAATACTCAACGAATGTGGTTCGGTGAAAATCAACGTCCGGCTAGCGAGGCCGAAGGCGCATCGGCCATTGAAGTCGAGGCTGCCTTTTGGAAACACGTTGCTGAGAGAAAACGTCACGTTTGCGTTCATGCAGCCAGCATCGATTCCAGCGGACGAGGTTTTGGTTTTTCTGTCGTTAAAAACAGTCCCTTCGCGAGACATCCCTGGAATCTTAAAGTTCTTACCAACAACGCTGGCTCGGTCTTACGAGCTTTGGGCCCCTTAATGGGAGTCACCGTGCCGACGCTCCACGTGGGAATGCTCTTCAGTGCCTGTTGTTGGTATCGCGATCCTCACGGACTTCCCTGGATCGAGTACCTCCACACAGGAGCGAAAAAAATTTGGTACGGAATTCCGGACGAGCACAACAACAATTTCCGAGAAGCACTCTCCAAAATGGTGCCTCGTTATTGTAAGAAGAAAACAATATGGCTGCCGTCGGACACCGCCATGGTACCGCCGGAATTATTAGTCAACAATGGTGTACCCCTGTGTCGTACTGTCCAAGAACCTGGACAATTTATCGTCGTTTTTCCAAAAGCCTTTACATCCAGCATCTGCACCGGTTACGTCGTATCCGAAAGTGTCTACTTTGCACAGCCTGCTTGGCTCGAAAACGCCGAACAAGTATTTAAAgatttgCAGGACAGCTGTGAGCCATCGATATTCTCCTTCGAAAGACTTTTATTCAGCATTATTAATGATTCTCGTTCTCAGTACGATGTATTGAAACAGATTATGCCAGTTGTGATAAAAATTCGAGAACGCGAACTTGAATACAGGAAACAATTGGAGTACATCGGATTGACGGACAAAGAAAAATTACCACTGCCAGGGAcgggaaaaggaaaaaaaggcaaaaaaattaAGGAGGAAGACGGTGACTTTGAGTGTGAAACTTGTCGAGCTAATTTGTTCGTCTCTCTCGTAAATAATTCACAAGACGACAGCATGTATTGTCTGCCACACGCTCTTCAAATGATCGTACGAAAGAAACAAGTACTGAAAAATTGTACTCTCATGTATACGTATACGGAGGACGAATTGGATGATTTGATACACAAGTTGGAAGATAGGATCGAAGCCAAATCGAAGAAACCTAATCAAATCAGGCAATCTAAATAG
- Protein Sequence
- MVLGRNDKRKRKEGDLVDLMDPLSESPKRTKVHAQRKFAQGAATVFSPAPPLVKEKEKTKSAVVTELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGSRKDKTEGKGGSVAKSGTKASSTLPSGTNGSSGKGESSGTVQSKGGAKSSTTTMKKKVVGNVVPTTLSKYKNTTLTVQALKKKYQEQRLAKQRIKNKLKASCVMRTRSSTDRTLHKSVPKISPRKFVPRTEKKRRDGLRSGGFVDKSKKVIISRNKVTKSLASKTKKRLSAKEESSESEDSETASSEDEEESRQKNNTALIRKTATSTKTIQKKICTRSKSEMRRITRSQRESSTIKQASLSRRPTRKTKEAAAVYMEILGRKLVSPELENEDNISVDSFPELPNARRTAQAENEMRAKTKAAAAAAVVAAAAATTAVMANKSGKETKQKDPKNEENIASRTRTKPEKVILKSKRTLRVRRYCELDSEDDSESSVEPEKPRQSTPRRIPAKIEKPSPRSLRSSSRNQSAKPEKVSVKRTREKLVKRPKVVVKRVEKEEGDDSEEEESLVNLLNKMSKKREENGAKSASKVEQQQQQQQQQQQQQNLTERKETILETSENTRQKETPVASQVSDDEESFRGFTKKAISKVLNSCNSHASANLLASEEASCNLESSQETRKIEIGTKSSEKSLEKLVIDDSSRDLGISSVKSFQETTIVANIQEENSCVKASTKLEEKCNHAASNEAAAAAAATATATTINLMDMPLSGVHGRKARVNMSTEQIEKWLNDSSMAREKSREKSDTETSTNFHFDVPAATKMKSESSNHLSIPTRIQHLVRPVNVTIPKLVEKSLARERSNNKNNKKIITNLVELERFSSLTKQLNIPAPNRNKINADIKEIIKGRSVKGTREERSTGEESSDGVSKSDQNSVDGSSLEKKLTPEKKSIFQQRKTFLPKVKERKTTIPSANAFSPENESSVYAFESDTEIPINTPFRRKLKEQAIKPTSGESEISRPEVVENSLDKFLVPKSFRNLSQMQVLPLGKMPAEWSGINCSASIAVQVNFDEQSREIQASQQQQQQQRQTTAVDDKLLGTEDNSVVRDKEEEEVVIGQQKCTEISTQTENTNENDNENDNDGHVFYIPLQTVGRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQRVLLRAQLVTKPPMTVARCPPVGTVQPTTRNPPNSSSSTTSVLDHPYAVLDPTQQQQPSTSTNSNACPLQMITDSTVPRNQTTPSSTPTSRLASHLTANEKNAAAGAAATTTKSPKSARERKASVDSTKTAKRVSAKSRQKMSEILSPTNATIFPGSTNSTNAEARLVEAPTFHPTEKDFQDPLEYIDKIRSIAEKFGICRVVPPANFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERSNLFDDVEEDWKKRETKTLQRLDAQSTDNDDEEDDDSSDEIEECIIKGRNMPLNAFYRIARNTQRMWFGENQRPASEAEGASAIEVEAAFWKHVAERKRHVCVHAASIDSSGRGFGFSVVKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKKKTIWLPSDTAMVPPELLVNNGVPLCRTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAQPAWLENAEQVFKDLQDSCEPSIFSFERLLFSIINDSRSQYDVLKQIMPVVIKIRERELEYRKQLEYIGLTDKEKLPLPGTGKGKKGKKIKEEDGDFECETCRANLFVSLVNNSQDDSMYCLPHALQMIVRKKQVLKNCTLMYTYTEDELDDLIHKLEDRIEAKSKKPNQIRQSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00266236;
- 90% Identity
- -
- 80% Identity
- -