Rneb017961.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- pnr
- Assembly
- GCA_948150685.1
- Location
- OX411306.1:211559812-211570179[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2 1.5e+04 -3.0 0.3 22 26 40 44 36 45 0.79 2 2 7.4e-18 5e-14 53.0 6.1 1 35 307 340 307 341 0.97
Sequence Information
- Coding Sequence
- ATGCTTTTCCCCCTCCCCCTGCAAAAGTTGTATGTTACCCCAACAAAGGCTGGAAGGCTGAGTTCTCCTTCACCAGTTTATTTTGAACATAGTGCAGATGACGATCTACCCGCAGTCCTCTGTGAAACATGTCTCGACAAATTGGAGATGTTTCTCGAATTCAGAATGTGTGCATCCAATTCAGAAAGAGCCTTAAGACAGTTCCTCCTCTCACCACAAGTTATTCCACAAGACGCAGATGATCTATTAAAACAAATTCACTACTCGACCCTTGACAAAGGAACTGTTGTCGAGGAGATGGTGGTAGGAAAAGAAGAAACCGTCATGGGAGGTGGGTCTGACTCTGAGGAGAGTTTAGTCATCAAGACTGAGAATGATGACGAACCAGGTTCTCCGTCCCGGCTACATCAAGAATTCATCAACAATGTAGTGGAAATCAACTCTAACAGAGCGGGTGAAGCGAACAGCCTTCTTCGCTCACTGATGTCAGCTAACACAAATTCTAGTTTAGACGAATCTGTGTCGCCATTCTCGCCCAGGCTCCTTGACAATGGACGTTCTGTGATCCTGATGCGCGAAGAAGTTCTCTGGCCACCTAATGAAGTACTTGCCAATAGAACAAATATACAGCAGCCCAAGCAGCAATCGAATGGCGAAAGTGGTGACGAGAGCCGAGGAGGAAGCGGCGGTGGTAGGAGGAAGCAGAGCTGCCCATTGAAGAGCGGTATCGATCCGCCACCGGGATACAGATCAGCTGAAGCTATCAGTCGGCTTCTTGAGGCCGCCCACTATGCTGGTGGGGGTACTGAGAGTGGGAACAGTGGAGGTGAGAGCGCAGGCGAGGACAGTTCTTCCAACTGGAGTAATGAATCCATCATGAAGGCCAATAGAGTTGTTACTAAAAGGGTCGACCTCTCTTGCTCTAACTGTGGCACACGAACTACTACCATCTGGAGGAGAAACCCAACAGGCGAGATGGTCTGCAATGCCTGTGGCCTCTATTACAAACTTCACAATGTCAACAGACCTGCAAATATGAGGCGTGACACAATTCATACACGACGACGAAGACCAAAATCAGCTTCTTCCTCACCCATGCCAATCATCAAACAAGAAGCTGCCAGCAGTAGAAAGCTTTCTCCTGCACAAGCCGGTCCATCAAGGGATAAAGAAAACCCCTATGGGGGTCCTAGTCAGCAAATGTTTGACAGTGTTGCCTTAATCAGAGCCAGTCCCGACGAGTGGGAGCAGCGGCGCTGGTAG
- Protein Sequence
- MLFPLPLQKLYVTPTKAGRLSSPSPVYFEHSADDDLPAVLCETCLDKLEMFLEFRMCASNSERALRQFLLSPQVIPQDADDLLKQIHYSTLDKGTVVEEMVVGKEETVMGGGSDSEESLVIKTENDDEPGSPSRLHQEFINNVVEINSNRAGEANSLLRSLMSANTNSSLDESVSPFSPRLLDNGRSVILMREEVLWPPNEVLANRTNIQQPKQQSNGESGDESRGGSGGGRRKQSCPLKSGIDPPPGYRSAEAISRLLEAAHYAGGGTESGNSGGESAGEDSSSNWSNESIMKANRVVTKRVDLSCSNCGTRTTTIWRRNPTGEMVCNACGLYYKLHNVNRPANMRRDTIHTRRRRPKSASSSPMPIIKQEAASSRKLSPAQAGPSRDKENPYGGPSQQMFDSVALIRASPDEWEQRRW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -