Rneb036668.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- pnr
- Assembly
- GCA_948150685.1
- Location
- OX411310.1:40626600-40656899[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-16 3.4e-12 47.1 1.7 1 35 268 301 268 302 0.97 2 2 3.5e-18 2.4e-14 54.0 6.3 1 35 325 358 325 359 0.98
Sequence Information
- Coding Sequence
- ATGATGGCAGAGGTACTGAGGCCTGAATATTGGTGGTTCCAGAACATGGAGCCTCCAGCGGCAGAGCAGGGTCAACAACAGCAGCAGGAACAGGAGCCTGGAGTGATCAGGCAGAGGACCATAACCACTTCTGGGACGATCACCACCAGCCCCCAGCATGAGGCCAGTCCCTCCCCCGAGCAGCCCGTCCAAGAGCATAATTTTAATTTACCATATTCTGATGCGTTTTTGCACAGAAGCGGTAAGGACGTGGAGGTACCGTACGAGATAGTGCAGCTGCGGCCCGGGAGCTACGACGAGGGGTACAGCTTGGAAGAGACGACCCGGTACAGCCCGGGTTCCGGCCGGTACTACACGACCACCGACGGCACCGTCAAGTATGAGCGTGACGACAAAGGCGAAGGCAGCTACGTGACGCTCGAGCCCGTCAACTACCCGCCCGGCGGTGCCTACCAGGAACCCGCCACGGGATACTATACCTACAAGGAGGAGGAGGATGTCTACATCAAGGCAGATCCGCCTCTCACACCCAAGAACTTCGCCCACTTCGATCATCCGGTCACCTCCCATCCAACACAGCTCAGTGCCCAGGTTACTTACGTGACGGGAGGGGGTAGCAGGGAGTACGTGACGACTAACCAGCCTGGCTACTGGTCCAGTGAATACGTTTACCAGCAGCCTCAGCAGGAAATCCAGCTGCCACCAGGAACCCCCTACGTGTTCTCCAGTAATGGACAGGCAACATGGGCCATCGACGAGTCTTACGATCCCAGTATGCTGTCGACGAGCGACATCAAGGAGTGCGTCAACTGCGCGGCGAGCGTCACCCCGCTCTGGCGACGGGACGGGACCGGACACCACCTCTGCAACGCCTGCGGACTCTATAGTAGGATCAACGGAGTACACAGGCCCCCGGTGAGGACGCACCACAAGAAAGTACACAATATTGGTAACAGAAGAAATGGCGTGAGCTGCGCTAACTGCCAAACGAATAACACAACACTATGGCGCAGAAATAATACAGGAGAGCCAGTATGTAATGCATGCGGACTTTATTTCAAACTCCATGGTGTAAATAGGCCACATACCATGAAAAAGGATGGTATCCAAACCAGGAAACGGAAACCAAAGAATCCTCAAGTCAACTTACCAAGTCCTAAAAACGATATAAAGACAACAGGTGAAAAATCAGGGAGTTGGGATAAATGTGATAACGACCTACTCGACAGCGGCTATACAATGGCTACATCATCCATATTTCTTCCTAGCCCATATTTAACAAAGCCTGTAGGAGTCAGTGTATCTGGCTTAGAAAGTGTACCACCCAGCGTCATCATACCACCCACATCAAGCCAAGAAACACAGAGAACTGAATAA
- Protein Sequence
- MMAEVLRPEYWWFQNMEPPAAEQGQQQQQEQEPGVIRQRTITTSGTITTSPQHEASPSPEQPVQEHNFNLPYSDAFLHRSGKDVEVPYEIVQLRPGSYDEGYSLEETTRYSPGSGRYYTTTDGTVKYERDDKGEGSYVTLEPVNYPPGGAYQEPATGYYTYKEEEDVYIKADPPLTPKNFAHFDHPVTSHPTQLSAQVTYVTGGGSREYVTTNQPGYWSSEYVYQQPQQEIQLPPGTPYVFSSNGQATWAIDESYDPSMLSTSDIKECVNCAASVTPLWRRDGTGHHLCNACGLYSRINGVHRPPVRTHHKKVHNIGNRRNGVSCANCQTNNTTLWRRNNTGEPVCNACGLYFKLHGVNRPHTMKKDGIQTRKRKPKNPQVNLPSPKNDIKTTGEKSGSWDKCDNDLLDSGYTMATSSIFLPSPYLTKPVGVSVSGLESVPPSVIIPPTSSQETQRTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00764344;
- 90% Identity
- iTF_00764344;
- 80% Identity
- -