Rneb036667.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- gata4
- Assembly
- GCA_948150685.1
- Location
- OX411310.1:40572839-40579655[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-18 8.7e-15 55.4 3.2 1 34 10 42 10 44 0.97 2 2 3.2e-20 2.2e-16 60.5 3.4 1 35 64 97 64 98 0.98
Sequence Information
- Coding Sequence
- ATGGAGTGCTTTGCGGAGGGCCGGGAGTGCGTCAACTGCGGTGCGATCAGCACGCCGCTCTGGCGCCGGGACGGTACGGGCCACTACCTCTGCAACGCCTGCGGCCTCTACCACAAGATGAACGGCATGAACAGGCCTCTGGTGAGGCAGCCCAGGCGACTGTCTGCTTCAAGAAGAGTCGGTTTGACATGTTCTAATTGCGGAACCAGTACGACATCCCTGTGGCGAAGAAATACAGTTGGAGAGCCAGTTTGCAACGCGTGCGGATTGTATTTCAAACTACACGGAGTCAATAGGCCTCAAGCAATGAAGAAAGATAGCATTCAGACAAGAAAGCGAAAACCTAAAGGCAGTAAAACAGAAAGGGCAATAGCAAATCAGATCAAACTAGAACACAACGGCCTGAACGACCTGAGGGGAGCAGTGAGCCACACTTCCGGAGGCCTGGGGTACAGCAACATGCTAAGCTACTCCAGCCACAATATCCCTCCCCCTTACCTAGACATTGGGACCAAGCAGGAGCACAGTGTAGAGACACCACACATAGTCACCTCACACAATGCTAAGCAGGAACGAGCATCTGTCCTTGTATGA
- Protein Sequence
- MECFAEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVRQPRRLSASRRVGLTCSNCGTSTTSLWRRNTVGEPVCNACGLYFKLHGVNRPQAMKKDSIQTRKRKPKGSKTERAIANQIKLEHNGLNDLRGAVSHTSGGLGYSNMLSYSSHNIPPPYLDIGTKQEHSVETPHIVTSHNAKQERASVLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00764341;
- 90% Identity
- iTF_00764341;
- 80% Identity
- -