Rneb009300.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- CSRNP3
- Assembly
- GCA_948150685.1
- Location
- OX411306.1:29867641-29878661[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.041 2e+03 -0.1 0.8 84 109 122 149 63 186 0.60 2 2 1.3e-98 6.1e-94 315.4 7.3 2 218 265 466 264 466 0.92
Sequence Information
- Coding Sequence
- ATGGCAGAAATTAATGGCTTCTGTGGGTTGATTGAATGTTCTGTTGTCCTGAACAACATTGCTACAGTTGGGACGAATATTGAGCTTGCAGGCTTCAAATCTGAAGATTTGAGCACAGCGATTTCAGAGGAGTCTCCTCCATCACCAATTAGCTCAGAAACTGTGATAGTTGAAAGTAGTGCAGATATTGGTGCTTTTTCAAATGTTGAAAAATCCGAATGTTCTTCCATCTCAGGTTATAAAGATAGATGTGAAAGTGATTTTATCAAAGAATCAGGAATAAATGATTCTTCACCAATTTCTAAATATAGTGAGGAACACAACAGTACTGTGGCCACCCCATTAGCACAGTGTAGTGATGATAATTGTGATAGAGATTCAGACAAGCAAGAACTTAGAAACGAGTGTAATAATGACATTAAAGATGATTCAAAAGACAGCAGTGACTCTAACTTCAAGAAAGACTCTACCGTTATTCTTGAGGAATTGAAAGTAGCGGGAGCAGAACAATTAGGTGAAGAAAGTTCTTCTGGTATTAGTGACGAAGAACAGTCAGGTGAAAGACACTGGGATATGGGTTCAGCTACGTCAAGTTTAACGTTTGGTGCCAAGGAGCCTGAAGGAAGTGATTCTGGTTTGAGCTCCGACGTTAAAGCAGATTCCCTTTCATCAGATGATTTAACAACTTCTCCCTGGGAGCAACGAACACCAACACCTACAATCAAACCTAAAAGTATGTTGAAGCGGCCTGGCTCAGTTGAAGAACCACAACCACAACCACCAGAAAAGAAGGCTAAACGATCCATTGCTTTTGGTGAAGTAAATGTGTATTACTTTCCTAGATCTCAAGGCTTCACATGTGTTCCTTCACAGGGTGGCTCAACACTAGGCATGTTACTAAATCATACTGATAGACGAACATTTAGTTTAACTGAACACGTCTCAGAGCAACGTAGAATTCATAGAGAGATGCTGGCTCAACTTCGGAATTCACCAGGAACTCTCCCTTCATCTTCTTCTGACTCGGACACTGATGACCAAAATACTGAATCAGAATTGGATCCTGATAACTATTTTTTCCTTCAGCCTGTTCCAACAAGGCAGAGGCGAGCTCTGTTGAGAGCTGCTGGAGTACGTAAGATAGATTCTCTAGAGAAAGATGAATGCAGAGATATTCGCAGTTCACGGGAATTCTGTGGCTGTTCTTGTAAAGGCTTTTGTGATCCAGATACTTGTGCTTGTTCTCAGGCAGGCATTAAATGCCAGGTGGACAGACTAAATTTTCCTTGTGGATGCACTCACGATGGTTGTGCTAATTCTAATGGCAGGATAGAATTCAATCCAATGAGGGTAAGAACTCATTTTATCCATACAATGATGCGAATAGAGATGGAAAAGAAGAGAGAACAAGAAGAAGAAGAAGCTAGACAATCGGAATTGTCTGGATTCTCAGGGTACCGCCAAGAAGTCTCTTATGCAAATTATCCATTTGAATCAGGTTTTTCATATCCCTCATATGCCTATCCATCATATGAAAATGATTTCCAGCAGTATGAGTCCTTCCAAAGCAGTTTTAGGTACCCAGAAGAGAAAGGGGAATCATTTTCAGAATTGCTCGCTCCAAACCGATATCAGGAGACCAACCTGGAGCAGATACAAGACCAGGGTCCTTCTCTGGTTGCCGAGAAACCTCAAGAAGAGACTGATGTAGAAAACTTTGGAGAAATTATTAAAAAAACAATGGTAGAGAGTGTAACAGCTTAG
- Protein Sequence
- MAEINGFCGLIECSVVLNNIATVGTNIELAGFKSEDLSTAISEESPPSPISSETVIVESSADIGAFSNVEKSECSSISGYKDRCESDFIKESGINDSSPISKYSEEHNSTVATPLAQCSDDNCDRDSDKQELRNECNNDIKDDSKDSSDSNFKKDSTVILEELKVAGAEQLGEESSSGISDEEQSGERHWDMGSATSSLTFGAKEPEGSDSGLSSDVKADSLSSDDLTTSPWEQRTPTPTIKPKSMLKRPGSVEEPQPQPPEKKAKRSIAFGEVNVYYFPRSQGFTCVPSQGGSTLGMLLNHTDRRTFSLTEHVSEQRRIHREMLAQLRNSPGTLPSSSSDSDTDDQNTESELDPDNYFFLQPVPTRQRRALLRAAGVRKIDSLEKDECRDIRSSREFCGCSCKGFCDPDTCACSQAGIKCQVDRLNFPCGCTHDGCANSNGRIEFNPMRVRTHFIHTMMRIEMEKKREQEEEEARQSELSGFSGYRQEVSYANYPFESGFSYPSYAYPSYENDFQQYESFQSSFRYPEEKGESFSELLAPNRYQETNLEQIQDQGPSLVAEKPQEETDVENFGEIIKKTMVESVTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00763850; iTF_00715117;
- 90% Identity
- iTF_00763850;
- 80% Identity
- -