Rneb034828.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- CAMTA2_1
- Assembly
- GCA_948150685.1
- Location
- OX411311.1:123418841-123458892[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-35 7.4e-31 107.7 1.5 40 116 2 76 1 76 0.97 2 2 0.86 2.1e+04 -3.4 0.1 67 99 268 300 256 308 0.64
Sequence Information
- Coding Sequence
- ATGCTCCTCTACAGCAGGAAGAAGGTGCGGTACCGACGGGATGGATATTGCTGGAAGAAGAGGAAGGATGGGAAGACGACGAGGGAGGATCACATGAAGCTCAAGGTCCAAGGCACCGAGTGTATTTACGGCTGTTATGTTCATTCTGCTATACTGCCAACTTTTCATCGAAGATGTTACTGGCTTCTTCAGAACCCAGATATAGTCTTAGTACATTACTTAAACGTTCCATACCCCGATGACAACAAAATTGTATCTCCGAGCCTGGCCCTCTGCGCTGATAAGAAACAGTGGACCAAAGAAGAACTTATATCCCAGCTCAAGCCCATGTTTTACAGTGAAGAAGAACCCGAACTTAACAATGAACTTGAAATATCTACAGCGGAGACTGTAGAGTCTATAGTGTGTCAGCTGTTGGAAAGGCAGCGTTCGGCGAGGGCTAGCGCGATTTGCAAACAACTGGAATGCGGTTGCCCAGATTCGACTTGTGCTGATGCTAAAGCATGTTCACAGCCAATAAGAAGAATAACGGCTGCCAAGGCGGAACCCGATACCAATCAAGTGTCGTCTACTACGGGCTCCGCAGGTTTGCTCCTCGGTCAGCGAGGCATTGTCCAACAGGAAAGGGCGCTACCCCTTCACCACATACAACAGCAGAACCATCACCAGGTACCACATGGCTCAAACACACAAAGTGGACCTCTTGTTCTCAGCCTTACCCAGCCGGGCAGCCTCCTGATCCTGAACAACCAGTCGGCCGGCCAGATTACGTCAATCGTCAGCGGAAGACACCAACAGCGTAAAGAAAAGCCTATGGAGTTGGAGAGTACAGTACCACAACAAGTCATGACCCAAATGAGGAATTCACAAGAAGATGATAAGTTCAAACAAAGGAAACAGAAAATGGAAAAGTTCACCGAAATGAAAGAGGTGAGCGGAGGTAGCGAATATTACGAGACGTTGGATCTATCTCAGGAAGATATCCAGAGGACTCTGTCGGCTAACATGCCATTGTCATGTTCTTCCAACGATAGAGGTTCACGTGAGGAAAGCAACAAACAATCATCAGTTCTTCCCGAGATAGAATTCATAGATGTCAATGCCTCCCAACACGTTGACGATGTCTTCCTCAATCTTGATGCTTTTGATATGCTCTCTGAATTCCCAGATCTAGAAGGCCTGGATCAAAATCATAATGGCGGTGGTTTGAACGACAATGGTAGTGGAGCGGACGGAGACAATATGGAGACAGAGAAAGGAAATGGATCACCCCCGAGGATGGACTATCGTGAAGGCACTGCTAACATCACTGACTATTCTCCAGAATGGGCGTACACAGAGGGAGGTGTGAAAGTGCTTGTGACTGGACCTTGGTATTCAACAACTTCACCGTACACTGTCCTCTTCGATTCTTGTCCTGTACCCACAACTTTAGTTCAGAGTGGTGTCCTTAGATGCTTCTGCCCAGCACATGAGGCTGGAGTAGTTACATTACAAGTGGCATGCGAAGGTTTCGTGATATCAAATTCAGCAATGTTCGAATACAAGAGGCGTGGCACTCAACCGCACGACTCCCTGCTCAGATTCACACTTTCCCAAAGGCTTGACAATCTTGATTCTCGTCTTGACATTAAACAAGAGCCTCTAGATCCGCTGGAAATCTCTGCATCTCGAGGAGGCAACGGTAGCAGCTTTGAGGACAAACTAGTCTGCGAGGTCGGTAAGATGAGCAGGAGGATGTGGCGCGATACTGATACAGTAGAGACTACTGTCGACTGGTGTGATACTTACAATGGTATGACGCTGCTTCACTTAGCTGCTAGCCTCGGTTATTCAAGATTAGTTTGTTCACTGATTCATTGGCGGACTCAGTGCCCTTCTTCCATCCTTGAGCTAGAAGTAGATGGTCTAAATCAAGACAATGACGGatatactcctcttATGAGAGCATGTGAGAGGGGGCATTCCGAAACTGCGCAGCTGCTGTACGAATGGCTTCCAGCTAGTGGATCCGTAATGAACAAGAGGGGAGAGGGACCTGTCGAAGTCGCCAAGAAGTTCAGCCATACCTGGCTGGCATCGGAGCTACAGGCGAGACAAGAAACTGCCTTTATACCGCTTTCCTCATCTGTTAAAGGTTCAATAAATAAGGATAAGGAAAGAGGAGAAACGGAGAGCAATAACGGTTCTCTTGAGTCATTACACAGCTCACGAGACGATGGTGTTTTCCTTCATCCTAATTCCTTAGTTAGGTCAGAATTAGGTATGAATATGGAGCTTCATGTGAACATTCCACAATGGTCCGAGGGTAGGAGGGTCATCAGTAGAACATCTACTCCGAGCCCTAGTACAGAAGGACAACTTTCCAAACTGCTGTGCGGTGAGAGGCTAGTAAAAAGGCCTTCAGTTGACTCTGGTATTCAACTGCAATCTTCGCTCGACAGTTTACCATCGAGCCAAATTTCATCTGGTCGCCAGAGCAAACTTTCGGATTCTTCTAAGCTATCAAGATTTGATCGAAGCATGTCATTGCCACTAAACCCTCAACCAGGCGATCTAGGCTATGACTCGAAACTAGACAATCATCCATCGCCAGTAAGGAGAATGGATTTCATCCTTTGTGACGCTAAGAGGGAGACATCTCCGCTCCAGATGGATGCTGTCCTGCTGTCGACGGAAGAAGTGAAGCGACAATCTGTAGGTGAACAGGACGCTAGAGTACTTACGCTTGCTGAACAAATAATAGCTgcaatgcctgataggataaagAATGAAAGTGAAGGTGACATGATGATGTTAAGCTCGGATGATATGGAAGTGATGTCAATGGAGTCGCCTCTTCTGCTCGACGAACCACCCTCTTCTTCCTCGTCCTGTTGTTTCGACAGTTCGGAATTCAATTTTGATAACAATTACAGATATTACGATGTTGGTACACCTTGCTCATCGCTTAGCCCCGGAAGCTGCCTCCCTTCGCCACCATTCCCACTGCACCGCTCGCCTTCTCCGCCACCAACAACAGCTGATTTCTGCGAATTCCTCCAAGCTTCCAACTCGACTTACTTTGAAAAGGATTTCTCTAATCTCACCCTATCAGATCGAGAGCAGAGAGAACTGTATGAGGCTGCCAAAGTGATCCAGAAAGCTTACAGGAGTTACAAGGGACGTAAGAAGTTGGAACAGGACAAGGAGAGACAAGCTGCAGTTCTCATCCAGAATTATTATAGGAGATATAAACAATACGCTTATTTTAAACAAATGACTCGTGCTGCAATGGTGATCCAGAATGGCTATAGGTCTTATTGCGAGAGCAAACGTTTTAAGAAGAATCAGGAGATAAGCAGCGGTACCCGTGTGTTCAGAAATTATAGGGAAGAGCCTGAAAGTGCACCCAATGGCTTAAAGAGAACATATTCTCAACGGAGACAACACCAAGCGGCTAGAAAAATTCAGCAGTTCATGAGGCAGTCAAAAAATAACTTATGGGATATAAGTGCTGGAACAATAGTTACAGAGAGAGCGAGCAGAAAGAGAGAAGCAGGCCCGATGCAGGGGGTCCCCTCATCAAAACTAGCCCTTCTTCCGTTCCACGTCTCCAAATGA
- Protein Sequence
- MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKIVSPSLALCADKKQWTKEELISQLKPMFYSEEEPELNNELEISTAETVESIVCQLLERQRSARASAICKQLECGCPDSTCADAKACSQPIRRITAAKAEPDTNQVSSTTGSAGLLLGQRGIVQQERALPLHHIQQQNHHQVPHGSNTQSGPLVLSLTQPGSLLILNNQSAGQITSIVSGRHQQRKEKPMELESTVPQQVMTQMRNSQEDDKFKQRKQKMEKFTEMKEVSGGSEYYETLDLSQEDIQRTLSANMPLSCSSNDRGSREESNKQSSVLPEIEFIDVNASQHVDDVFLNLDAFDMLSEFPDLEGLDQNHNGGGLNDNGSGADGDNMETEKGNGSPPRMDYREGTANITDYSPEWAYTEGGVKVLVTGPWYSTTSPYTVLFDSCPVPTTLVQSGVLRCFCPAHEAGVVTLQVACEGFVISNSAMFEYKRRGTQPHDSLLRFTLSQRLDNLDSRLDIKQEPLDPLEISASRGGNGSSFEDKLVCEVGKMSRRMWRDTDTVETTVDWCDTYNGMTLLHLAASLGYSRLVCSLIHWRTQCPSSILELEVDGLNQDNDGYTPLMRACERGHSETAQLLYEWLPASGSVMNKRGEGPVEVAKKFSHTWLASELQARQETAFIPLSSSVKGSINKDKERGETESNNGSLESLHSSRDDGVFLHPNSLVRSELGMNMELHVNIPQWSEGRRVISRTSTPSPSTEGQLSKLLCGERLVKRPSVDSGIQLQSSLDSLPSSQISSGRQSKLSDSSKLSRFDRSMSLPLNPQPGDLGYDSKLDNHPSPVRRMDFILCDAKRETSPLQMDAVLLSTEEVKRQSVGEQDARVLTLAEQIIAAMPDRIKNESEGDMMMLSSDDMEVMSMESPLLLDEPPSSSSSCCFDSSEFNFDNNYRYYDVGTPCSSLSPGSCLPSPPFPLHRSPSPPPTTADFCEFLQASNSTYFEKDFSNLTLSDREQRELYEAAKVIQKAYRSYKGRKKLEQDKERQAAVLIQNYYRRYKQYAYFKQMTRAAMVIQNGYRSYCESKRFKKNQEISSGTRVFRNYREEPESAPNGLKRTYSQRRQHQAARKIQQFMRQSKNNLWDISAGTIVTERASRKREAGPMQGVPSSKLALLPFHVSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00715116;
- 90% Identity
- iTF_00715116;
- 80% Identity
- -