Rneb023505.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- TRERF1
- Assembly
- GCA_948150685.1
- Location
- OX411307.1:78740708-78829618[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-08 9.3e-05 23.8 0.1 3 46 865 908 863 908 0.94
Sequence Information
- Coding Sequence
- ATGTTGTTATCTAAAGTATATACGACAAGATTTATTCTAATTGAACCTGTGAGTGAATTCAAGCCAGTTCTTTTGTATTCGGAAGACGAACAAGTCCAGATAAATATTGAAGATAGCAGTTTGCTGAGGCATCAATTATCTGATAGTGAAATAGATATTTTCTTGCCTTCATCAACGCCAGTCGATAGTAGCTGTGAAGTTATTAAAAATGAATCAAGGCTTGCTCCCAGGAAACCTACAACAAAGTCATCATCACCCAATAGGCAGGGACCTCAGCGATGCCAGGTATGTGGCAAAGTTTTTGCTAATGCTTCTGCTCTGGCGAAGCATAAACTCACACACAGCGATGAACGCCGGTACATTTGTACTATGTGTGCTAAAGCATTCAAACGACAAGATCATTTTACCGGCCCTCCTCCTGAAGAAATTCCTGCGTACGTCCTTGTACATGGGCAAGTAAAAGGTCCAAACTCATCTGAGAAGCTCACAAAACAACATTTGGATCTTATTCAACACGTCATACAAAAAAATCAACATCCATCAACAGTAAAGTCTTTTGAAACAACCAAAACGAGCCCTGCTTCATCAGCGGTTATAGCTTCCACAAACGGTACTAAAACATGGACAATGCAGACTAGCCAATCAGCTGCAAAGGCTATGGTATGCAATATTAAACCAGTAGAGTGTAATTTGTGTCATCGAAAATTCAAAAATATACCGGCTCTTAATGGACATATGAGACTACATGGAGGATATTTTAAGAAGGATTCAGATGCAAGGAGGTATGAGATAAAAGATGTAAATACAACACCATTACAAACAGCTAGCATTAGTGTCCGTGCTCTGATAGAGGAGAAAATTATTTTGAAGAGAATTTCTAAACCAAGTGGAATAATAAATGTCGAACAAGGAACTTTCACAGTGCAAAATGGGGATGAAATAGTTGCACAAAATGTTGGCTTGTTACAAAAATCAGTATCAGTTGACAATCCAATCATCAAAAGGGCTCCTAAAATCACTCTTAGAAGGTCTAACCCTGATCCTGGAATGCAGAAGAGAATGGATGGTACTACTTTGGTTGATCCAGAGAATGGAATTATTTCAATACAAGAGTTAACAGATGACACTGTTGACACATCTTCCTTTCAAAAAACAATAAGCGAATCAGTTATTTTAGAAACAGTGGATTCCAGTAGTATGGGAGAAGTACCAACTAAAATAGAAGACATTGATGATATTACAGCACTAGATGATTGTCAAAGTGCAGGGGAATGTTTACCAAGCCCTCATTCATTTCAACATAATCAAGAACTACAAAGTGTTTTGGATTCTCCATTACCTGCTAGTTTAGCAGACTTTGCCTACAGCCATTCTCAAGATACAAATAATGAAATGCAAAATGATCCACAAAACTATTCATCAACTATGGTAGCTTCTTCCACCTTTTCCTATTCATCACCAAAATTGTCCGCTTCACACAGCTCTATGCTACAAAATTCCAATCCTTCAGATTTTTTCTCTCCTAATGGAATATCAAGTACATCTGTGTCCAGTGAGGCAGTAGTCCTAACCTCTAAATCTCCTTCTCCTTCCACTAGCACATCAAATGCATCCTTTCAATCACAGATGATGCCGAATTCGGATGATCCTTTACTATCAAGTAGTCCAAAAGAATTTGTCTCTAGAAAAAGAGTAGATTTCCATCCTCTTAAAATTCTACAGAAAAATACATCACATGTTGCAACATCACAGAATGTGGCTGGAATACTTCTGGGAAGTAATGGTGAATTGAGAGTAATACATACATCTCCTAAGCATGGTTCGAAACTTGCTTCAGCTGCCTCTTCATATCCTTGTTTGAAACCAGAAAATAGCATAAAAATTAAAAGTATATCTTTCCAACCTAAAACTACATTTATAAAAAAGTATGAGAAAATTGGACAATTCATTTCTGATGAATCCAAAGATAAGGCTGACGACACTGTATTTAATACTCCAAGTTTAGCATTGAGCCCTCTTCATCTTTATCGAAAACGACCACGTCTTGAATTCAGCCAATATGTATCTCAATATAAATCAAGATTAAGAAATTTTAAGAATGCTCAAGGAAATAAGCCTTTGTCATATACCCCACCACCAATGCTTCCACCATCTAGACCAGGGCAAGGTTTATATTGGCTAGCTGTTACATCTACACCTAGTTCAACTACTCTCAATAAAGGGTCATCTTGGGATGAAGGACCGGAAGCTCCAGAAAGTGATTCTAGACCACATATTAACATTGGTCCGGAATACCAAGCTGAAATACAAGAGTGTGAACATGAAAAAATAAACTTAAAGGAAAAAGCTAAAGATCATTTACTTTGGGATTCTAGTCTAAATAAAATTGTTTCAGATTATGAAATTGAAAAGTACTTGGAGTTTGCATGCTGTGCTGCAGTGCCTGGTGGAGGAAGGAATAAGGAGCATGCTCTTCATTTATTGCATATATGCAATGGAATAATACAAGATGCTATGCTGAAGTTGATGCAGCCAGTTTCATGGCTCCCAGCAGATCATCCCCTTTTAACATTTGAATATACAGATTCTGAAAAATGGAATATGATAGAAATTGATACATTCCATCAAGCATTATTAAAGTATGATAAGGATTTTTCATCTGTTGCACGCGAGGTTGAAACGAAAACCTCAAAGCAATGTGTACAATTTTATTACTTATGGAAAAAAGTGTGCCCAGAGGAATATAAAAAACTTCGAGTTTTTAGGAAGCGGTACCGTGAAGCAGAGTATGAAAATGAATCTCCTAAGCTAGACCAACAGACTGGAGATGCTGAACTGGTTTCTACAACATCCTCAGAAGGCCGTTTATTCCTCTGTGAATATCAAGACTGTTCCGCAAGCTTCAATTCACGAGCAGCTCTAAATGGCCATATAAGGATTCACGTGGGTGGTACAGGAACAAGATGTGGGACACCTGACAAACGATCTCCACAATTGGTCGAATCTCTTGAAGAGTTTCCTTGCAAAATTTGTGGAAAGATTTTCAATAAAGTGAAAAGCAGAAGTGCTCACATGAAATCCCACCGTCCCCCAGATGCAGATGTAAAGAAGCAAAAATCTGATTTGAACAAAGACACTGGTATCTTATCACTAACACGGACTGGTAGTGTTTCCTCTTCAATATCAACACAACTATCCTTTGAAGGACTTTGTGTGTTGTCAAATATTCCATTACAAACCTCATGGGACCAGAGGAAGAGGCAGATCGCGATTAAGATGGGAGGATGTTGTAACCAGAGGCGCCCTGGACCTGCTGGGCACCCACAGCTGGCGAGAGGCTGCACAAGACAGATTGACCTGGTGAAGACTCATTGA
- Protein Sequence
- MLLSKVYTTRFILIEPVSEFKPVLLYSEDEQVQINIEDSSLLRHQLSDSEIDIFLPSSTPVDSSCEVIKNESRLAPRKPTTKSSSPNRQGPQRCQVCGKVFANASALAKHKLTHSDERRYICTMCAKAFKRQDHFTGPPPEEIPAYVLVHGQVKGPNSSEKLTKQHLDLIQHVIQKNQHPSTVKSFETTKTSPASSAVIASTNGTKTWTMQTSQSAAKAMVCNIKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSDARRYEIKDVNTTPLQTASISVRALIEEKIILKRISKPSGIINVEQGTFTVQNGDEIVAQNVGLLQKSVSVDNPIIKRAPKITLRRSNPDPGMQKRMDGTTLVDPENGIISIQELTDDTVDTSSFQKTISESVILETVDSSSMGEVPTKIEDIDDITALDDCQSAGECLPSPHSFQHNQELQSVLDSPLPASLADFAYSHSQDTNNEMQNDPQNYSSTMVASSTFSYSSPKLSASHSSMLQNSNPSDFFSPNGISSTSVSSEAVVLTSKSPSPSTSTSNASFQSQMMPNSDDPLLSSSPKEFVSRKRVDFHPLKILQKNTSHVATSQNVAGILLGSNGELRVIHTSPKHGSKLASAASSYPCLKPENSIKIKSISFQPKTTFIKKYEKIGQFISDESKDKADDTVFNTPSLALSPLHLYRKRPRLEFSQYVSQYKSRLRNFKNAQGNKPLSYTPPPMLPPSRPGQGLYWLAVTSTPSSTTLNKGSSWDEGPEAPESDSRPHINIGPEYQAEIQECEHEKINLKEKAKDHLLWDSSLNKIVSDYEIEKYLEFACCAAVPGGGRNKEHALHLLHICNGIIQDAMLKLMQPVSWLPADHPLLTFEYTDSEKWNMIEIDTFHQALLKYDKDFSSVAREVETKTSKQCVQFYYLWKKVCPEEYKKLRVFRKRYREAEYENESPKLDQQTGDAELVSTTSSEGRLFLCEYQDCSASFNSRAALNGHIRIHVGGTGTRCGTPDKRSPQLVESLEEFPCKICGKIFNKVKSRSAHMKSHRPPDADVKKQKSDLNKDTGILSLTRTGSVSSSISTQLSFEGLCVLSNIPLQTSWDQRKRQIAIKMGGCCNQRRPGPAGHPQLARGCTRQIDLVKTH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00764159;
- 90% Identity
- iTF_01298691;
- 80% Identity
- iTF_01298691;