Rneb010897.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- Iswi
- Assembly
- GCA_948150685.1
- Location
- OX411306.1:67169273-67181230[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-06 0.015 16.7 0.0 3 41 815 854 814 854 0.96 2 2 0.0049 12 7.5 0.0 3 21 917 936 915 947 0.91
Sequence Information
- Coding Sequence
- ATGTATAATATTTTTGGCCAAACCTGGACTCTCCATGAATTGAGGACAAAGCAGATTCCAGAAGATTTCAGTGTTGGAGGACATCTGCGATGGAAGGTGAAGAATGAATCTTCTAGAGATACTATGTCATCCAAAGGCAAAAATGAAGATTTTGACACAAAAATTGAAACTGATCGTGCGAGAAGGTTTGAATATCTGTTGAAGCAAACTGAAATATTTTCTCATTTTATGACTAATCAGGGGAAAACCAATAGCCCCACCAAACCTAAGGTTGGTCGTCCTAGAAAAGATAAAGTGGCCCCAGTGGGTGGAGATGTTGCAGACCATCGTCATCGTATGACTGAACAAGAAGAGGATGAAGAATTGCTTGCTGAAAATAATTCAGCCCCTAAAACCATTGCTAGATTTGATGCCTCACCATTCTATATTAAAGGTGGAGAGTtgagagactaccagattcgtggtttgaactggatgatatcactttatgaacatggcattaatggtatactcgctgatgaaatgggcttgggtaaaactcttcagactatatcactTCTTGGTTACATGAAACATTATAGAAATATCCCAGGTCCACATATGGTTATTGTGCCGAAGTCAACTTTAGCCAACTGGATGAATGAATTTAAAAAATGGTGTCCTTCTTTACGTGCTGTGTGCTTGATAGGTGATCGAGAAGCCAGAAATGCTTTGATACGGGACACTTTGATGCCTGGAGAGTGGGATGTGTGTGttacatcatatgaaatgataattcgtgaaaaaagtgtgtttaagaaattcaactggcgttacatggtgatagatgaagctcacagaatcaagaatgaaaaatcaaaactctctgagatagtgagagagttcaagaccacaaacaggttgcttttgactggcaccccattgcaaaacaatctccatgaattgtggtctcttcttaactttttactgccagatgtattcaattcatcagatGACTTTGACAGTTGGTTCAATACAAACAACTTTTTGGGGGATAACTCTTTGGTTGAAAGATTGCATGCTGTTTTGAGACCATTTTTGTTAAGGCGATTGAAATCAGAAGTTGAAAAAAAATTAAAACCTAAGAAAGAAGTCAAGATATATGTTGGGCTCAGCAAAATGCAGAGGGAATGGTATACCAAGGTATTAATGAAAGATATAGATATTGTTAATGGTGCTGGTCGGATTGAGAAAATGCGTTTGCAAAACATCCTTATGCAACTGAGAAAGTGCAGTAACCACCCTTATCTCTTTGATGGAGCTGAACCTGGTCCACCTTATACTACTGATGAACATCTGGTTTTTAATAGTggaaaaatggttattttggataagcttcttccaaaattacaagaacaaggatctcgagttcttatttttagtcaaatgaccaggatgatcgatattcttgaagactactGTTATTGGCGAGGATATAATTATTGTCGTTTGGATGGTAACACACCTCATGAAGATCGTCAAAGGCAAATTAATGAGTATAATGAAGAAGGTAGCAAGAAGTTCATATTCATGCTTTCAACTCGTgctggaggtctaggtattaatttagctactgctgatgttgtaattctgtatgattcagactggaatccacaaatggatttgcaagctATGgatcgtgctcatcgtattggtcaaaagaaacaggtcagagttttcaggatgattacagaaaatactgttgaagagaaaattgtagaaagagctgaaataaagctccgtctagataaattggttatccaacaagGAAGGCTTGTTGATAATAAAGCAGCTCTGAACAAAGATGAAATGCTTAATATGATCAGACATGGTGCCAATCATGTGTTTGCAAGCAAAGATTCTGAAATCACGGATGAAGATATTGACACTATATTGGAAAAGGGTGAAGCCAAAACTGAAGAAATGAATAAAAAACTTGAACAGCTTGGAGTTGATTCATCTTTAAAAGATTTTATGATGGAGGCCCCCACTGAATCTGTTTATCAGTTTGAAGGTGAAGATTATAGAGAAAAGCAAAAAGTGTTTGGAATAGGAAATTGGATTGAACCGCCAAAACGAGAACGTAAAGCTAATTATGCTGTCGATGCCTACTTTAGAGAAGCTTTGCGGGTTTCAGAACCTAAAGCTCCCAAGGCTCCTAGACCTCCAAAGCAACCTATAGTGCAGGATTTCCAATTTTTCCCTCCTCGACTATTTGAGCTATTAGATCAAGAAATATACTATTTTCGGAAAACTGTCAGCTATAAGGTTCCAAAAAATCCAGAATTGGGATCAGATGCTTCTCGTATACAAAGGGAAGAGCAAAGGAAAATTGACGAAGCTGAGCCATTGACTGAGGAAGAACTAGCTGAAAAAGAAAATTTATTAACACAGGGCTTTACTAATTGGACAAAAAGAGATTTTAACCAGTTCATTAAAGCTAATGAAAAATATGGACGTGATGATATTGATAATATTTCAAAAGATGTAGAAGGGAAGACCCCTGAAGAAGTTCGTGCATATTCTGAAGTATTTTGGGAAAGATGCAATGAACTACAAGACATCGATCGCATCATGGGGCAAATTGATAGAGGTGAAGCGAAAATTCAGAGAAGAGCCAGCATTAAAAAAGCTTTGGATACTAAGATGAGTCGATATAGAGCACCATTTCATCAACTACGAATTGCTTATGGAACAAACAAGGGAAAAAATTACACAGAAGAAGAAGACAGATTTCTTGTATGCATGCTACATAAACTTGGCTTTGATAAAGAAAATGTGTATGAGGAACTTAGAGCAATGGTGAGGTGTGCTCCTCAGTTCAGGTTTGATTGGTTCATCAAGTCTCGAACAGCAATGGAACTGCAAAGGCGTTGTAATACTCTAATCACATTAATTGAAAGGGAAAACCAAGAATTAGAAGAAAGAGAAAAAGCAGAAAAGAGGAAAAGTAGAGGTGGTAGTGGCCGTGGTCCCAGTTCTGGGAAACGTAAGGGAGATGGATCCATTTCATCGCCACCAGTTTCTATACAGGGTGATAAAAGCAGTCCTGCTCGGAAAAAGAAAAAGTACGTTTCTATTGAGTAA
- Protein Sequence
- MYNIFGQTWTLHELRTKQIPEDFSVGGHLRWKVKNESSRDTMSSKGKNEDFDTKIETDRARRFEYLLKQTEIFSHFMTNQGKTNSPTKPKVGRPRKDKVAPVGGDVADHRHRMTEQEEDEELLAENNSAPKTIARFDASPFYIKGGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVIVPKSTLANWMNEFKKWCPSLRAVCLIGDREARNALIRDTLMPGEWDVCVTSYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNNFLGDNSLVERLHAVLRPFLLRRLKSEVEKKLKPKKEVKIYVGLSKMQREWYTKVLMKDIDIVNGAGRIEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVILDKLLPKLQEQGSRVLIFSQMTRMIDILEDYCYWRGYNYCRLDGNTPHEDRQRQINEYNEEGSKKFIFMLSTRAGGLGINLATADVVILYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRMITENTVEEKIVERAEIKLRLDKLVIQQGRLVDNKAALNKDEMLNMIRHGANHVFASKDSEITDEDIDTILEKGEAKTEEMNKKLEQLGVDSSLKDFMMEAPTESVYQFEGEDYREKQKVFGIGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRKTVSYKVPKNPELGSDASRIQREEQRKIDEAEPLTEEELAEKENLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNISKDVEGKTPEEVRAYSEVFWERCNELQDIDRIMGQIDRGEAKIQRRASIKKALDTKMSRYRAPFHQLRIAYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRAMVRCAPQFRFDWFIKSRTAMELQRRCNTLITLIERENQELEEREKAEKRKSRGGSGRGPSSGKRKGDGSISSPPVSIQGDKSSPARKKKKYVSIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01500297;
- 90% Identity
- iTF_01479377;
- 80% Identity
- -