Rneb047021.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- snpc-4
- Assembly
- GCA_948150685.1
- Location
- OX411309.1:71812213-71814282[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.3 3.2e+03 -0.3 0.0 23 44 382 405 379 407 0.73 2 5 6.8e-11 1.6e-07 32.7 0.5 1 45 413 459 413 460 0.93 3 5 7.7e-06 0.019 16.5 0.2 1 44 467 514 467 515 0.89 4 5 1.2e-12 2.9e-09 38.2 0.0 1 42 521 562 521 564 0.98 5 5 4.7e-14 1.1e-10 42.8 0.3 2 42 574 615 573 617 0.97
Sequence Information
- Coding Sequence
- ATGAAAATAACACAAAAACGTTTGAAAAGAAATGGTTCCGATACTAGCTCGCTTTCTCTCAATATAGTGGGAAAAAACGTTCCCAACCAATTAAGAAAAAAAATTAGTCCAAAGCCCGCCAACTTGTGTAAAATTGAGAGTATTGAAGATGTATCAAACTCTAAGGTCGATGAAGTAAGTATTTTTAATATTTCTCATTTTCCAAACAAAGAAAATGTTCCGATTTATTACAATGACAATGAACTAATTTATAAAAAAGCCGAACAGATTTCTACGAATAATTACATTCCTTATCCTTTTCAAGAAAGTAGCAAACATAATTGCGGTTTATATGACCCAATTCAAAGTTTAAACATTGAATCTGATAATTTAATAAAAAATGAAAGTATAAATTATAATTACAATATTGATTCATGCTCAACATTATTAAGATTAGGTGGGGAGGATGCAGAAAATTTAGATGAGGAATCAAGTGATGATGAGTTTGATTTTATTTTAGAACAAGAATTAATAAAGGAGCAAATTAAAAGAAACACCAGTATCTCTTCTAATGAGGATACTTATATTAATACCTTAGTTGAAGGTTTCAGTAATGAAATTAGTTTAGAAGAACAAAGTAACTTAATTTTAAATGCGATTAGAACTAATCGTAAATTAGCTGATTTATGTGTGACCCTTGAAACAGCTCTCGTTAAAAAGTTAGATAAAATAACAAAAGAATTTCAGCACTTAAAAGTAGATTGTTTGAATTCTGTTGATGATGGAGACACTATAGTCAGTAGAGGTTTTTATAGTCAATTTGGTGCTCCTTATTTCAAAGATTCTTCAGGATTTTACTGTCCAAGAAATCAAGATTTTAAGGATAAGCTGTCTAAAAACCAGTTTATTGGCTATTTATACATGCAAACAGATCACACTGCTGATATTGCTGCATTATCTAATGCTATAAGAGAATACATTATAGATGACTATGTGAAAAAATCTAATCTTGTAGATTTAAAAAAAAAGTGTTCAGAAATTGATAATATAGCTCAACAAGAAGCAATTTCGAAAGATATTAGTTTCATAAAAAGTAAAGTTGCTTTCATGAAATCTGTTGATTTGAAATTTCTTGTTAAAGACATTTCTGATTCAGATATTGACTGGATGAAGATATCATCAAAGGAATCTCTTGACATTCTTACTCCTGGTGAATGTTTAAGATATTGGAATTTAATTTTATCACCCAAAGTTAATAGGGGAACTTGGGCACAACAAGAAAAAAAAGAACTGAAAAAATTGGCTATGCAGTATGATTACCAGAATTGGGATAAAATTGCAGAATTACTTAACACAAAGCGAACAGGGTACCAGTGCTTTATTCAATTCAAAAAGCACTTTGGAATGGTGGATTTCAACAGAGGTCGCTGGAGTAAAAAAGAAGATGTTCAGTTGTCTTATCTTGTTAGCATAAGTGAACAGGGAGGTGTAATTGGATGGGCAAAGGTTTTATGCCATTTGGAAGATAGAACAATGGCTCAAGCGTTAAACAGATGGTATCGCTTAGATCCAGGTTTAAAGAAAGGTAAATTTACAGATGAAGAAGATATTATTTTAGTGAATGCTGTGGAGCAATTTGGTCTTGATTTTCAGAAAGTTGCGTCTGTGTTTCCTAACAGATCAGCAATCCAATTAAGAGAGCGATATTTTGCAAAGCGAGACATGAAAGTTAATAAATGTGGTGAATGGTCTTTAGCTGAAGATAAACTTCTTATGGATTTAATCGCTGTCCATGGTGAAAAAAAATGGTCAAAGATAGCTGAGAACTTTCCTTCCAGGAATAGAATCCAAATCAGACATCGATATAAGTGCATAAAATTGAATTTGCAAAAGGATCCAGGATTTAAACTTGAGAACTTAAATAGGTTTAAAAGAAATACTCATGTCAATGCAAAAAATAAACGAGATGAAGCAGCGATATCAAGAAGCACAGCTATTGATATCATCAGTAAAACTATCGAAGAAGGTAAAATATTTTACAACAAAAGAAGAATTTTGAAAAGAACTGGAAGACTGAAAGAGAGAGGTTGA
- Protein Sequence
- MKITQKRLKRNGSDTSSLSLNIVGKNVPNQLRKKISPKPANLCKIESIEDVSNSKVDEVSIFNISHFPNKENVPIYYNDNELIYKKAEQISTNNYIPYPFQESSKHNCGLYDPIQSLNIESDNLIKNESINYNYNIDSCSTLLRLGGEDAENLDEESSDDEFDFILEQELIKEQIKRNTSISSNEDTYINTLVEGFSNEISLEEQSNLILNAIRTNRKLADLCVTLETALVKKLDKITKEFQHLKVDCLNSVDDGDTIVSRGFYSQFGAPYFKDSSGFYCPRNQDFKDKLSKNQFIGYLYMQTDHTADIAALSNAIREYIIDDYVKKSNLVDLKKKCSEIDNIAQQEAISKDISFIKSKVAFMKSVDLKFLVKDISDSDIDWMKISSKESLDILTPGECLRYWNLILSPKVNRGTWAQQEKKELKKLAMQYDYQNWDKIAELLNTKRTGYQCFIQFKKHFGMVDFNRGRWSKKEDVQLSYLVSISEQGGVIGWAKVLCHLEDRTMAQALNRWYRLDPGLKKGKFTDEEDIILVNAVEQFGLDFQKVASVFPNRSAIQLRERYFAKRDMKVNKCGEWSLAEDKLLMDLIAVHGEKKWSKIAENFPSRNRIQIRHRYKCIKLNLQKDPGFKLENLNRFKRNTHVNAKNKRDEAAISRSTAIDIISKTIEEGKIFYNKRRILKRTGRLKERG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00165184;
- 90% Identity
- -
- 80% Identity
- -