Rneb026870.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- ARID4B
- Assembly
- GCA_948150685.1
- Location
- OX411307.1:133762732-133788606[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4 2.7e+04 -3.0 0.0 46 81 231 263 219 264 0.61 2 2 2.4e-11 1.9e-07 32.7 0.0 1 40 307 346 307 348 0.95
Sequence Information
- Coding Sequence
- ATGAATGAGAGTTCTGTCGAAATATTGACCTGTGCAGATGAACCTCCTTACTTAGCTGTAGGCACAGAAGTTAGTGCTAAATATAAAGGTGCATTTTGTGAAGCCAAGATTAGAAAAGTTGTTCGAAGTGTTAAATGCAAGGTTATTTTTAAACAAGGCCTTGGAACAGTTACTGTTACTGATGACCAAATAAGAGGACAAATACGGAATGGTGTTATAGTAGAAGCTCGACATCCTGAAAAAAAAGAATTTTTTGAAGCAACTATAGCCAAAGTTCAGGATTGTAGTCAATATACTGTCGTTTTTGATGATGGAGATATCACCACCCTTAGAAGAACTGCTTTGTGTTTAAAAAGTGGTAGACATTTTGCTGAAAGTGAGACCCTTGATCAACTTCCACTTACCCATCCTGAACATTTTAGTAATCCGGTTATTGGAGGAAGACGAGGCAGAAGAAATCGAACAGGACCGGAAGAAAGTAGTGAAGATGAGGAAGCATTTTTACTTTTAAAAGATTTTAGTGATGAAAAGGAAGAAGATATTGGTCGTGTAGTTTGTGTTGAAGGAGCTGAAAAAAAAAAGCAAAAAGATAACTGGTTTCCTGGTTTAGTTGTTGCTCCAACTGCTCAAGATACAGTTCCCATTGATACTAGATTAGAATATCTTGTCAGATCTTTTAAAGATGGTCGATATTATACTGTTCCTAAAAAAGAAGCATTAGAATTTACCAGGGAAATTGGCTTAAAAGTAGAAAATAGTGCTTTGAAAGCAGCTGTTGAAAAGGCTTACCAATTTTTAGATAAGGATGAATTACCTCCTCATTGGGATAGAGATTCTTTGTTTGGTCTTACTGATAATATGGCCACTGACAGTGATGCTGGATTTGATTATGAAAGTTCTGATGATGAACCAAGAGAAGAAAAAGATCACTTTGTTGCTCAATTATACAAATTTATGGATGATAGTGGCACTCCCATTAACAAGGGACCCATTATTGGATCTCAGGATGTTGACTTATATCGACTATTCAAGGTGATATTATTCAAATAA
- Protein Sequence
- MNESSVEILTCADEPPYLAVGTEVSAKYKGAFCEAKIRKVVRSVKCKVIFKQGLGTVTVTDDQIRGQIRNGVIVEARHPEKKEFFEATIAKVQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFSNPVIGGRRGRRNRTGPEESSEDEEAFLLLKDFSDEKEEDIGRVVCVEGAEKKKQKDNWFPGLVVAPTAQDTVPIDTRLEYLVRSFKDGRYYTVPKKEALEFTREIGLKVENSALKAAVEKAYQFLDKDELPPHWDRDSLFGLTDNMATDSDAGFDYESSDDEPREEKDHFVAQLYKFMDDSGTPINKGPIIGSQDVDLYRLFKVILFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00154294;
- 90% Identity
- -
- 80% Identity
- -