Rneb001567.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Rhaphigaster nebulosa
Gene Symbol
JARID2
Assembly
GCA_948150685.1
Location
OX411308.1:38679254-38733913[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6e-21 4.8e-17 63.5 0.0 6 89 1812 1893 1808 1893 0.93

Sequence Information

Coding Sequence
ATGAGAGCACGCACTGCGAGCGATGAACGTCAGTCCATTAGAAAAAAGGCAATAGAGTTACGAAGAATAGCTGCTCAGAGAAGATCAAAGCCTATTAGAAAAACTCATCCAGCCATTTTGAAAAGACTGGGTGCTGCAAGGCTTCGAGCAGGCCTTCGCAGTGGGGGACAGCTTCCACCAGGTAGTGATGCAGGAATTAAATCTGATAGGAAACCAAGAAGAGGAAGACCTCGAAGAAGGCGGATGAAGATTGTTCAAAAAGAATCAGTTGATGAATCTCCTGAACGCAAAGGAGACACAGAAAGTGAAGAAAGTGATGAAGATTCGGACGAGCAGCCTTCCAAAGTGTCAACCATGAGGCTAAGAACACGGGGGTCTTCTAATTCTCCTGCTCAACCACCAAAAACATTAAATGTTTCATCTCGTCCCAGCAGAAAAACTAAAGAAGCTGCTACTTTATATATGGAAATGCTTACAAAAGATTTAAGAAGCCCTGATGAAGAGTTTGATGGAGATTATATTAAAAATTTACCTGAATCTTCTAATAGTACCAAGAAAGAGAAAGAAGATGATTTTAAAGTGACACCTAAGAAAACTAGGCAACAGGTAAAAGATGAAAAGAATAAATCTGGAAAATCTCATAAAGACGTAGCTAAAATTAATATTAAGGAAGAGGAGGACAGTGAACTTGATGAAGAAAATGAACCCCTTTTGACTAGAACCCAAAGAACTCAGAAAAAAGATGTTTCTAAAGTAATTGCTGAAACAAGTAACAGAAGAAGAGAGTCTTTTAATAGATCTGTTGACAGAAAAAAGGCTGAGGATTCTCCCAAAAATTTAAAAAGATTGGCTGGAAAAAGAGAACTTAGAACTCTAAAGGAAAGAAAAAATATGAATGATGACAATCATACTACTTCAGAGGAAGAAGAAGAAGTTGGAAAAGTTTTTAATGACAAAATTAAGGAAGAACAATCAGAAGGTAGAGGCTCAGTAGAAACAGTTAGCAAACCAGTTATTTTAAAAAGAAATGAACAGAAGAAATCTGGAACATTAAAGCAAAGCCCAAAAGATATTAAAAAAGGAAAAAGGTTTTCAAGTTTTAAAAATTCAGTTGAAAGCAATGATGATACTGTTACAACTAAGAAAAAGAAAGGACCAGAGGGTACTGAAAAAAAAGTGGTAGATCGTGAAGAAACTGATGAAACTAATAAATCCAAGACAATTGAACGTAAAAAAATAAGGAAACTAGTAGAAAATGAAGATCTTGCAGAACCTAAACATAAGTCAGAAAAAAGGTCTAGTTCGCTTAGCAAGGAAGATAAAACTAAAGTAGCTAAATTATCTAAAGAATCAACAAGCAAAGTTACAATTAAAGTAGAAAAGGAGAATGAAAGTGATCAGGATGAAGAAAATGAACCTCTGCTTAAAAGGAGTCAAAGAATGTTAAAAAAGGACAGTGTATCTTGTGAAAAAAAGACCACTCCAGGACGAACTTTGCGAAGTAATGAACCGAAAACTGAAATTAATGCCAAAGACTATCCCAAAAAAAGAGGTAGGAAAAGTTTGAAAGTTAGTAAAAATTTAGATGAAGATAATATAGAAGATGAAGTATCTATTAGTAAACCAAAAGATGTTCTTCCCAAAAAGGTGTTTGAGGAAAAAACTGAATCAAAGGAGGCTGTTAATAAAGAAGTGCAAAAGAATACTAGTGAAAATGAAAAGAAAAATATAAAGGACGTTACTCCCAAGAGAGGAAGACGTGTTTCGAATGTTAAAAATGTTAACTCTGAAAAAGAAGATTTGAAAGAAGCGAACGTTAGTGAAATTTCGAATGCAGGCAAAAGCAATTCGGTATTTGAAAAAGGGCTTGATATTACTAATAGGGTTAACATTACAGAACTGAGGTCAAAGAAGTTTAATGATGATGTCTCAGACAGTAATTTTGCTGCCAAAGCTAGAACATCAAAAAAATCATTTGAGGATCGAAAAGATATGGACATCATCAACAAAGTTAAAATAACAGATTTGAAAACAAAAAAAATAGTTGAAGATGAGAAACCTATTGATGTTACTAACAAAGTAAAAATTATGGATACTAAAGTTTCAAAAAATGATGCAGTAATAGATGATGATAAAAGATTTGATGTTTCTGGGAAGACAAAAATGGCAGAACCTAGGATGTCAAAAAAATCTATTGCCGAAAACAAAGGGATGGATGTTACTAATAAAGTAAAATTATGTGATCATAAAACTACAAAAAAGGTTGAAAGTGAGAATGAAATAGACATTATTAATAGAGTGAAAATATCAGATAACAATGCACATAGAAAACTTGAGGATGATGAAAAAGAAGGGTCTAACCAAAAATCTTTTGATCCCAAGAAGAATAAAAGCTTTGACACGGATGATAAAAATCTGAATAACACCGAATCTGAAAATCTTAAAGAAATTGAACCGAAAAAAAGAAAGAAATTAATTTCTGTAATTAGTAATACGTCAGATGAAAAAAAATTAAAAAGAGTAACACGACAGTCATCTGGAGGACCCTTAGAATCTGAGGAAGTTATTTATGAAACTGGGGATCCAAAATCAAGTGTATCTGAAATCCATCAAAGCGATTTGCTAAAGGAAGAAGCTGAGAAGTTTCAAACCAGAAGATCAAGTTCAGGTTCTAAAACCCAAAGTAAGAAAGACTCTGAAGGAAAATCTTTAGAAACTATATCAGTTGAAAAAGTCAAAGTTGCTTCAATAGGAAAACGGAAATCTGCTAGTGATAGAGATAGTTGTGATACGATAAACAGTGAAGGTAGTGCAATTGTAGATTGTAAAGTTGTTTTAGAATCTTTGGAAGATGCCAGCAGGGATGTTCAGAGACCTTCAAAGAAGCTGAAAATAACTTCAAAAGATATGAACACTGAAAATCCACTAATTGATAGTAGAGATGATAAACAACTAACAAACAATGATTTAATAGCTGCTGATTATGAAAATAACATTACAGTTGAAACTTCTGGCAACAATGAAGTAGAACTGGCAGAGGATAAAAAAGAACATAGAGATGAAACCCAAAAGCCTAAACAATCAATCAGTGAAACGTGGAGGCAAGCATTTAAAAATGCAATAATACCAAAACCAGGCCAGCTAAGTCCTGTACCTCATACGGTCAAGCCATTTGTTAGACAAAAGATCTCAAATATTTCTCTTTTAAATCCATCATTCTCTAACAAACCTGCTGAAACTCCAGATTCTAAGCCCAGTGATAGTACTAATAAATCTCAAAAGCTAACATCCAACTTATCACCTTTCAAAGCTATGATAGCCAACCAAAATCAAAGGAGTGTTTCTCCTGATATAAAAAAAAATTCTTCTCCTGTTCATAAAATTAATTTTGGAGGACGAGACAGCCCTCTCAAAAAATATGATGAAATAAAAAATGATTACAAAAAACAAGAAACCCCTGTTAAAACTTTCACTCAACTTCAGTATGAAAAAAGAAGTTCTGAATTTATTAATAGTATTTCTGACTCAGTATCTTCGATTTTACCAGGTTTTGATAGTATAAAGCCATTTAAGAAAGAAATAAAAAAAGAAGAATCCAAGGATTCAAAAGGAGACACCAGTGATAATCTATCAACAGCATCCTCTGAACCCATACCAAAACCACCTCCTGAAGGTAAGCATTTAAATCTACCATTGGCAGTTGAGCATACTTTGCGAAAAATGTCACCAGTGACAGTCAGCAAGAAGCCTATTGTCAAACCTGTGATAACCTCTTTGGATCGGAAACATGAGAACGCTGTTTTAGCTAAACAAAAGCATGCACCAACTGAAATAAAAATAGAAAATCCATCTGATATTTCAGCTTCACCTTCTGTCAGTGCTAGTTGTTCCCTTCCATCAAGAGATTTGATGGTCAGAGAACCATCAGACATCAGTTTAATGGCTAAAAAAAAAGTCAGCATGACTACAGAAGAGATTAATAGATGGCTTAATGACAACACTAGTTCTGGAATAGAACATAAAAAAGACTGTGGGATCTTAGAAAATAATCAATGTGAATGTGGTTGCGGTTTTCGTTCCTGCAAAGAAGGCATGGAAAACAGCGTTGGAATGAGTGAACTAGTTGCCAAAGATGATGGAAAGATAGACCATGGGGTTGTAGAACCTCCAGTTCAATTGAAAGAATTAGACCAAGCACGTAAATATGAAGCAGAAACTATTTCTACCTGTAAAGTAGAAGATTACAAAGAAAAACTTCTAACTAAATCATCCATTTCTGAAAGTAAAATGGCACCTCCTAAACCTCGAAAATCTTCAGGTTTTGAAAAGTTCAAAAGCAATAGATCAATGACAGATGAAGAAATGTGCGATTATGATTTTAGATTTGATAGGACATCTACCATTTCTCCAAGAGAATCCATGTCAGATCTTTCATCAATAACACCAAGAGATGATGGCTCTAGCTCCTCAGAAATGCCAGAAAGAAAGATTTTTCAACAGAGACGGTTAGGTACCAAAAGACCTTCGTTATCAAAAAGTCCTAGTGCATTTTCTGCAGAAAATGAATCTAGTGTTTATGCATTCAAACCTGATCCCCCTCCAAGTAAACCTTTTCGACGGGGTAGAGGAAAGAGTGGTGATAATGAAGATGGACCTTCTAGTTCATCAATAGCTGTTCAAGTCAATATTGAAACTGAAGCTGTCCTGGAGTGTTCTACACAAACTGATCGCGAGAATGATGAGAATGAGGGACACTTATTTTATATACCACTTCCAGAGTGCCAGGTGGAGAGGGGGTTGCCTCAAGGTGTTGCAGTAAAGTTGGATACTGAAGGACCGGACCAAAGGGTCATCATGAGAGCTAAACTGGTCACAAAGCCAACTAACAACTACTCCTTGCCTTCAAGTTCAAGAGCCCTTGTTACTTCTGGCCGCAATTCAAGCAAACAGAAGCCTGAACAGAAAGTTAGGCCACTTTGGTCTGGTCGTGCCCCGATTGGTACAGTACAGCCAACCTTGAGAGAACAGCGAACTAGCGATCAAGGTACCACAACGAGCCTCGAGAAAGGGCAATCTATTCAATCTTCTCAATCCAATCAAACCACTCAAATAAATCAGAACAGTCCAAAGGGCCCTGATAGTCCCAGGATAAAGAATTTATCTAAACCACAGAAAGTAGATGAATTTCCACTAAATGGCACTCCTGCAACACTTGTAGAGGCTCCAACATTCTATCCTACTGAAAAAGAATTTCAGGATCCCCTCGAATATATAGAACATCTGACACCTCTTGCGCAATCTTTTGGTATTTGCAGGATAGTGCCACCATCAAGTTTTAAGCCTGAATGTAAGGTGGCTGATGAGATGAGATTCACAGCTTATAATCAATATGTCCATAAAATGATGGAAAGGTGGGGTCCAAATGTGAGAGAAATGTCTGCTATCAGAAAATATTTAAGAACACAAAGTATTTCGCTGGTGCAGGTTCCTTCCATTGGAAGTATGGAAGTAGACTTACCGAGATTATATCAAACGGTCCAGCAGTGTGGGGGATTAAAAGAAGTAATTGAGAAAAAGCGATGGGCTCGTGTTGCTGATGCAATGCGTATACCGAAATTGGCTCAGGATAGAGTTACCAAGTTAGATGATATCTACTGCAAGTTTCTCTTGCCATATGATACACTTTCTCATGAAGAAAGAAATAAATTATTAGAAGAAGTTGAGGATGAATGGAAAGAACGCCAAAAGAGGCTAGCTGCAGCTGAAGAGGAATCAGGGAGTGCAGATAATAGTAGTGATGAGAGTGAAACTGATGACAGGGATGAGTGTATCGCTAAGGGAAGAAGTATGCCTCTATCTGCGTTCTTTCGTACAGCTAGAAATACAATGGCAATGTGGTTTAAAGATGGAGCTCCTTTGGCTGCAGAGGTGGAAGCTGAATATTGGAAGCATGTTTCTCAGAAAACATGTCACGTATGTGTTCATTCAGGTTCTATTGACTGTGCCACTTGGGGGTGTGGTTTCCCTACCACCAAATCATCTGCCACTTCACGGCATCCATGGAACCTGAAAGTTCTTACCAATAATCCTGGTAACATTCTACGTTCCCTCGGTCCTGTTATGGGTATTACAGTTCCTACACTACATGTTGGAATGTTATTTTCTTCATGCTGTTGGTACCGAGACCCTCATGCTCTTCCATGGATTGAATACTTACACACCGGGGCAAGCAAAATATGGTATGGAGTACCTGATTCTTGGTGTAGTGAATTAAGGCAAGCAATGTACCCACTCCTTCCACGCCATACAAGAGATCGTACAATATGGCTCCCTTCAGATACTATGATGGTACCACCCACTTACCTTCTTGATGGTGGAGCTTCTGTTTGTCGGGTTGTACAAGAGCCGGGTCAATTTATACTTGTCTTCCCAAAATCATTTACTTCTAGTATATCAACTGGCTACGTTGTCTCAGAAAGTGTCTATTTTGCCCAACCTTCTTGGCTCAACACAGCAGAACAAGTTTACAAGGATATTCTTGACAGCTGTGAACCACCTGTTTTCTCTTTTCACAAACTTTTATTCAATATTGCTAATGATGCAAGAGCTTCAGCTGAAACTCTAATGCAGGTTTTACCAATGGTGAAGTCTGTTGTCGAACAAGAAGTTGAATCAAGAAAGAAACTAGAAAAGCTTGGCTTAACATCATGGGAAAGAATCCCATCATCTAAAGGAAGAAGAAATAAGAAACAAGAAGAAGAAACAACAGACTTGGAGTGCGATATTTGTCGTGGGGCATTCTTTTTGTCAATGGTAACAAATTCTAATGAGGATTGCAGCTATTGCACCAATCATGCAATTGAAGTTCTCACAAAAGATCAGAGCCTTCTCAAGTATTGCAAAGTGAAATTCGCCTATGATGAAGAAGAAATGGAAGAACTTATAGATAAAGTGAAGAATAAAATAGAAACTAAAACTCAAAAGAAACAAGCTAAAGAAAAAGGGAGCTCTAGCGGATCTAAGAATTAA
Protein Sequence
MRARTASDERQSIRKKAIELRRIAAQRRSKPIRKTHPAILKRLGAARLRAGLRSGGQLPPGSDAGIKSDRKPRRGRPRRRRMKIVQKESVDESPERKGDTESEESDEDSDEQPSKVSTMRLRTRGSSNSPAQPPKTLNVSSRPSRKTKEAATLYMEMLTKDLRSPDEEFDGDYIKNLPESSNSTKKEKEDDFKVTPKKTRQQVKDEKNKSGKSHKDVAKINIKEEEDSELDEENEPLLTRTQRTQKKDVSKVIAETSNRRRESFNRSVDRKKAEDSPKNLKRLAGKRELRTLKERKNMNDDNHTTSEEEEEVGKVFNDKIKEEQSEGRGSVETVSKPVILKRNEQKKSGTLKQSPKDIKKGKRFSSFKNSVESNDDTVTTKKKKGPEGTEKKVVDREETDETNKSKTIERKKIRKLVENEDLAEPKHKSEKRSSSLSKEDKTKVAKLSKESTSKVTIKVEKENESDQDEENEPLLKRSQRMLKKDSVSCEKKTTPGRTLRSNEPKTEINAKDYPKKRGRKSLKVSKNLDEDNIEDEVSISKPKDVLPKKVFEEKTESKEAVNKEVQKNTSENEKKNIKDVTPKRGRRVSNVKNVNSEKEDLKEANVSEISNAGKSNSVFEKGLDITNRVNITELRSKKFNDDVSDSNFAAKARTSKKSFEDRKDMDIINKVKITDLKTKKIVEDEKPIDVTNKVKIMDTKVSKNDAVIDDDKRFDVSGKTKMAEPRMSKKSIAENKGMDVTNKVKLCDHKTTKKVESENEIDIINRVKISDNNAHRKLEDDEKEGSNQKSFDPKKNKSFDTDDKNLNNTESENLKEIEPKKRKKLISVISNTSDEKKLKRVTRQSSGGPLESEEVIYETGDPKSSVSEIHQSDLLKEEAEKFQTRRSSSGSKTQSKKDSEGKSLETISVEKVKVASIGKRKSASDRDSCDTINSEGSAIVDCKVVLESLEDASRDVQRPSKKLKITSKDMNTENPLIDSRDDKQLTNNDLIAADYENNITVETSGNNEVELAEDKKEHRDETQKPKQSISETWRQAFKNAIIPKPGQLSPVPHTVKPFVRQKISNISLLNPSFSNKPAETPDSKPSDSTNKSQKLTSNLSPFKAMIANQNQRSVSPDIKKNSSPVHKINFGGRDSPLKKYDEIKNDYKKQETPVKTFTQLQYEKRSSEFINSISDSVSSILPGFDSIKPFKKEIKKEESKDSKGDTSDNLSTASSEPIPKPPPEGKHLNLPLAVEHTLRKMSPVTVSKKPIVKPVITSLDRKHENAVLAKQKHAPTEIKIENPSDISASPSVSASCSLPSRDLMVREPSDISLMAKKKVSMTTEEINRWLNDNTSSGIEHKKDCGILENNQCECGCGFRSCKEGMENSVGMSELVAKDDGKIDHGVVEPPVQLKELDQARKYEAETISTCKVEDYKEKLLTKSSISESKMAPPKPRKSSGFEKFKSNRSMTDEEMCDYDFRFDRTSTISPRESMSDLSSITPRDDGSSSSEMPERKIFQQRRLGTKRPSLSKSPSAFSAENESSVYAFKPDPPPSKPFRRGRGKSGDNEDGPSSSSIAVQVNIETEAVLECSTQTDRENDENEGHLFYIPLPECQVERGLPQGVAVKLDTEGPDQRVIMRAKLVTKPTNNYSLPSSSRALVTSGRNSSKQKPEQKVRPLWSGRAPIGTVQPTLREQRTSDQGTTTSLEKGQSIQSSQSNQTTQINQNSPKGPDSPRIKNLSKPQKVDEFPLNGTPATLVEAPTFYPTEKEFQDPLEYIEHLTPLAQSFGICRIVPPSSFKPECKVADEMRFTAYNQYVHKMMERWGPNVREMSAIRKYLRTQSISLVQVPSIGSMEVDLPRLYQTVQQCGGLKEVIEKKRWARVADAMRIPKLAQDRVTKLDDIYCKFLLPYDTLSHEERNKLLEEVEDEWKERQKRLAAAEEESGSADNSSDESETDDRDECIAKGRSMPLSAFFRTARNTMAMWFKDGAPLAAEVEAEYWKHVSQKTCHVCVHSGSIDCATWGCGFPTTKSSATSRHPWNLKVLTNNPGNILRSLGPVMGITVPTLHVGMLFSSCCWYRDPHALPWIEYLHTGASKIWYGVPDSWCSELRQAMYPLLPRHTRDRTIWLPSDTMMVPPTYLLDGGASVCRVVQEPGQFILVFPKSFTSSISTGYVVSESVYFAQPSWLNTAEQVYKDILDSCEPPVFSFHKLLFNIANDARASAETLMQVLPMVKSVVEQEVESRKKLEKLGLTSWERIPSSKGRRNKKQEEETTDLECDICRGAFFLSMVTNSNEDCSYCTNHAIEVLTKDQSLLKYCKVKFAYDEEEMEELIDKVKNKIETKTQKKQAKEKGSSSGSKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00165028;
90% Identity
iTF_00763668;
80% Identity
-