Rneb016163.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- KDM5B
- Assembly
- GCA_948150685.1
- Location
- OX411306.1:182539200-182543627[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-23 7.1e-19 69.4 0.0 3 88 109 189 107 190 0.92 2 2 0.11 8.5e+02 1.8 0.0 24 68 1319 1363 1303 1374 0.76
Sequence Information
- Coding Sequence
- ATGAAACCTAAACCGAGAAATATGGAGGCCACTCAACAGGAGGCCAAAGTGCCTTCAACCCCTAGAAAATACAAACAGATATGCGTTAATAAATTTAAATTTGACCCACCTCCTGAAGCACCTGTATTTTCGCCCACATTAGAAGAATTTGAAAATCCACTTAAATACATAAATAAAATCAGGCCTATTGGTCAGAAAACAGGAATATGCAAGATCATCCCACCAGTGGGGTGGAAGGTGCCTTTTGTTTTAGACATGGATAGCTTAAAATTTACTCCAAGAATACAAAGAATAAATGAACTTGAAGCTAGAACTAGGATTAAATTAAATTTTATTGATCAATTAACTAAATTTTTTGCGCTTAAAGGGAAGACTTTCCAGATACCAGTTATTGAAAAACGAACTTTAGACTTATATACACTCCACAAACTTGTAAAAGAGGGGGGTGGTCATGAAGAAGTAACTAAATCAAGAAAGTGGGGAGAAATTGCCCAAAAAATGGAATTGACGAATGTCAAATCTCCTGCTTTGTTGAAGACTCATTATGATCATTTAATACTTCCTTTTATAACTTCCAGATTAGAAGCAGAAAAAAATAAGGAAATGGGAGATAATGAGACATTGAGAGATAGTAATGGCAATCCTATTGAGAACAGTGATTCGAATTCTCCATCATTTAGAGAACTAAAAAGTTTAACATTTTTAGGTCCAGGTCCAAAAATGGCAGTTTGTGATCTGGCTTTTACGAAATCTGTCAAAACTAGAACACGTGGTAAGAAGATAATGTATGAATTTGATCCATTGGCAAAATATATGTGCAAAAGTTGTTCCAATGGAGACATTGAAGAGTCATTAGTGACTTGTTTAAGTTGTGAAGATAGATACCATTCTTCCTGTCTTATACCACCATTAACTGATACAAATTTGAGTGGATGGAGGTGTCCAAAATGTGTGGCTACGGAAGCTTGTAAGTCTTTAGAAGAATTTGGTTTCGCTCAGGCAGAAAGAGAGTATTCATTAACTGAATTTCGTGAAATGGCTGATACCTTCAAAGAAAATTATTTTAAAATGAAACCTGTAGATGTGCCTACCAGTAGAGTGGAATCTGAATTTTGGAAAGTTGTTTCTTCCATTGAAGAATCAGTTACAGTTGAGTATGGAGCAGATTTACATGTTATAGATCATGGTTCCGGCTTCCCTATTAAAAATAAACCTACTAAAGCTGATGTAGATAATGAAGTTTTCAATAAATATGCTGAATCCGGATGGAATCTTAATAATTTGCCTGTCTTAAAAGCATCAGTATTACGACATATTAGTGCAGATATATCGGGAATGAAAATACCATGGATGTATGCTGGTATGTGCTTTGCAACTTTTTGTTGGCACAACGAAGACCATTGGAGTTATTCCATCAACTATTTGCATTTGGGAGAGCCAAAAACATGGTATGGAGTTCCTGGAAGTAGTGCTGAAGATTTTGAAAGAGCAATGAAGGCTGAAGCTCCTGAACTTTTTGATTCTCAGCCAGATATTCTTCATCAGCTAGTTACCATTATGAATCCAAATGATATAATGAAAACAGGTGTTCCTATTTATAGAACTGACCAGAGGGAAGGTGAATTTGTCATTACATTTCCTAGAGCTTACCATGCTGGTTTCAATCAAGGTTTTAACTTTGCAGAAGCTTGTAATTTTGCTCCTTATGATTGGCTTCACATTGGACGAGAATGCATTAGTCATTATTCATCATTGAAGAGATTTTGTGTATTTTCTCATGATGAGTTAGTATGTAAAATGGCTGAAATATATGATGAATTGGATAAAAAAATTTTACTTGCTACTTATAAAGATATGAGAACAATGGTTAATGCAGAACATACCAAGCGCAAATTTCTACTCATGCAGGGTATAAAAAATGCTTCAAGAGTCAGGTTTGATGAACTTCCAGATGATGAACGACAGTGTTTTGTATGTAAAACGACATGCTTTCTATCAGCATTAGTATGTAAATGTAATCCATTAAAGCTTGTTTGTCTAGACCATTATAAACAATTGTGTGTTTGCTCAGTATCAAATTACAAATTGAAGTATCATTATAAAATTGATGAACTTGTTGCAATTTTGTACCTAATGAGAAATAAAGTTGAGAACTTTGATAAATGGATAGTCAGTGTGGATAAGTCTTTTTCTGATCTCAATAAAAAATTTTATTTTAGGATATTCACAGAACTTTTAATTGACTCCAAAGATAAAGAATTTACAAAAGATGAATTACTGAATGTACTTGAAGATCAAGTAAAGAGCTGTTTACAAATTTCATCAACAGCCAAGACTTATTTAATGAATTTAAATGGAGATTCTTCCAAAAATCAGAAGAAGAAACATGTAGATGACTTAATTAAGTTTTCTAATAATTTAAATAAAGTTCCTTGCAATTTAGTCGAATCTAACAGCATTAAAAACCTCTTAGAATGCTCGCTTAAGTTGAAAAAGATAGCAAAGAAATTATTAAATTCAAAGGTTATGAATAGAGCCCGAATTGGTCACTGTATTCGTTTAATGAAAGCTATAAACATTGATTTTGAAGAGTTATCCGAATTAGAAATAAAATTGCTGACCTGTGATTGGATGGATAGGTACAATAAAGTTATATCTCAGCCTTGTCATATTGAAGAAATAGAAGATTTAATTGAAAAGGCCAGTACATTTCCAAGGACAAGTTTAGCTTATAAGCAAAGCTTTGACCTATCCAAATCTTTAGCTTCAGTAGTCTCATGGAAATATCGACTAGATATGGCATTTTCTTCACCTCACCTCACACCTCAGGATTTAAGGAACTTATGGTCAGAGCAATCAGGTATGTTGCAAATTATTTTTCCTGAAAAAGAAAGATTTGCCAAAGTTATTGAACAGAGTGACTACATTGAACTCCAAATGAAGTCATTATTGAGTGGTGAAATGGTCCTTTATCATGAAGAAATTGTAAAATTAATAACAGATGCTAAATTGTTACCAGTTTGTTTCCCATCACTTCAGCAACTTCAAGAAAGTGTAATTGAAGCATCAAGGTGGCTTTCTTCAGCCAGAAAATTATACCTTAAGAGAAGTTCCCCTTTTGATTTAATGAATGCTTTATGGCCGAGAAAATTTGTTAATCGCAATAATTATTACAAAAGAACCAATGGAGTACCATACAATGTTGTAGAATCAATATTTGATGTTTCTGGAAAAAAGTTCTCAAAAAGAGATTTTCGACAATGTTATAAAACTCAAATAAAATCTATGTTTGAATTAAGACTGCAGAACAGTAATGTTACTGTTGGCAAATCTTGTCCATGCGGCTCAGAATTGAATAGCAGAACTTTAGAGTGTAGGATTTGTTATACAGTTTATCATAGTCGATGTTTTATAATTGAAGACAAGAGTAGTTATCCTACTCTATATAACTATTTTAACAAGCTTATTTGTAGTTTCTGTTTCCGAACAAAACGTCCACATATTGATAGAGTAAGAGAGTTATATAACGATTTAAAAAAGTTGGCTGTGAAAGTACCTGAATGTTTTGCTTTAGAATACAGTCTTTCAAAATTTAATGATTGGCAAAAGAGAGCACAAAGAATATTAAGCACCAAAGAAGTAGTGTCAGCATTGCATCTTATCAATGCTAATTCCAAAAAGATTTTAAATTCAAATTCTGTTCAACAATTAAAAGCCAGTGCTCCACCTAATAGTTTGATTGATCTTAATATAGATATTGTTCAACTAATAAATGAGGAAATTAAGGATTTCAGGCATATATCAGTGAGTAATGATAAACTTTTAGAACTTAGACAGTTAATGATGGAAGGTGATATAATGGAAATTACATCTAAAGAAAGCTCAGATATTTGGATGTTGCTTGAAGCTGCTAAGATGAGAGACTATTTCATGATAACTCCCTCATCGTTTCAACCATCTACTTCAAAAATCAATAAGAATCTTGTCAAAACAAAATTAAAAGTGGTAAAGAAGCCTGGAATGAAATCTGTCAGAAAAAATCCAAATATAAAACGGATCATGAGGAAAACTAACATGCCTACAATAACTAACCAGAATTATTTGTTGAAAACTAAAATTCTTCAGACTGAGTCAATATCTAGTATGACCCCTTCTTCCCCTGGTGCTTCATCAGTAGTTAGTGAAACGGGTGAAGATTGCGCTGCGGAAAATTGTTTGAAGCCCACAGAAGATTCTTTGGATTGGGTTCAGTGTGATGGGAAGTGTGGTCAATGGTTTCATATGAAATGTGTAGATCTCACTAAACAAGAGTTGTCTGAAGATGATGAATTTTTATGTCTTCACTGCTTAGGAGAAGGTCCCTACAATGAAGAAGAAATACAAATCTGTTCCTTAGATAACAACAGGATCAATTTCTTCATTCAGTAG
- Protein Sequence
- MKPKPRNMEATQQEAKVPSTPRKYKQICVNKFKFDPPPEAPVFSPTLEEFENPLKYINKIRPIGQKTGICKIIPPVGWKVPFVLDMDSLKFTPRIQRINELEARTRIKLNFIDQLTKFFALKGKTFQIPVIEKRTLDLYTLHKLVKEGGGHEEVTKSRKWGEIAQKMELTNVKSPALLKTHYDHLILPFITSRLEAEKNKEMGDNETLRDSNGNPIENSDSNSPSFRELKSLTFLGPGPKMAVCDLAFTKSVKTRTRGKKIMYEFDPLAKYMCKSCSNGDIEESLVTCLSCEDRYHSSCLIPPLTDTNLSGWRCPKCVATEACKSLEEFGFAQAEREYSLTEFREMADTFKENYFKMKPVDVPTSRVESEFWKVVSSIEESVTVEYGADLHVIDHGSGFPIKNKPTKADVDNEVFNKYAESGWNLNNLPVLKASVLRHISADISGMKIPWMYAGMCFATFCWHNEDHWSYSINYLHLGEPKTWYGVPGSSAEDFERAMKAEAPELFDSQPDILHQLVTIMNPNDIMKTGVPIYRTDQREGEFVITFPRAYHAGFNQGFNFAEACNFAPYDWLHIGRECISHYSSLKRFCVFSHDELVCKMAEIYDELDKKILLATYKDMRTMVNAEHTKRKFLLMQGIKNASRVRFDELPDDERQCFVCKTTCFLSALVCKCNPLKLVCLDHYKQLCVCSVSNYKLKYHYKIDELVAILYLMRNKVENFDKWIVSVDKSFSDLNKKFYFRIFTELLIDSKDKEFTKDELLNVLEDQVKSCLQISSTAKTYLMNLNGDSSKNQKKKHVDDLIKFSNNLNKVPCNLVESNSIKNLLECSLKLKKIAKKLLNSKVMNRARIGHCIRLMKAINIDFEELSELEIKLLTCDWMDRYNKVISQPCHIEEIEDLIEKASTFPRTSLAYKQSFDLSKSLASVVSWKYRLDMAFSSPHLTPQDLRNLWSEQSGMLQIIFPEKERFAKVIEQSDYIELQMKSLLSGEMVLYHEEIVKLITDAKLLPVCFPSLQQLQESVIEASRWLSSARKLYLKRSSPFDLMNALWPRKFVNRNNYYKRTNGVPYNVVESIFDVSGKKFSKRDFRQCYKTQIKSMFELRLQNSNVTVGKSCPCGSELNSRTLECRICYTVYHSRCFIIEDKSSYPTLYNYFNKLICSFCFRTKRPHIDRVRELYNDLKKLAVKVPECFALEYSLSKFNDWQKRAQRILSTKEVVSALHLINANSKKILNSNSVQQLKASAPPNSLIDLNIDIVQLINEEIKDFRHISVSNDKLLELRQLMMEGDIMEITSKESSDIWMLLEAAKMRDYFMITPSSFQPSTSKINKNLVKTKLKVVKKPGMKSVRKNPNIKRIMRKTNMPTITNQNYLLKTKILQTESISSMTPSSPGASSVVSETGEDCAAENCLKPTEDSLDWVQCDGKCGQWFHMKCVDLTKQELSEDDEFLCLHCLGEGPYNEEEIQICSLDNNRINFFIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00165027;
- 90% Identity
- iTF_00165027;
- 80% Identity
- -