Rneb047605.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- ARID5B
- Assembly
- GCA_948150685.1
- Location
- OX411309.1:87181814-87193445[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-25 2.9e-21 77.0 0.0 2 89 241 326 240 326 0.95
Sequence Information
- Coding Sequence
- ATGGCTACTGGTGTTCAACCAACGAGTGAGTACTCATACGCATATGCCGATTCCAAGAGACTGAAGAAGACAGTTATGTTAACAAAGGATGAAGTCCTTGCGATCACAGAGAAAGTTGTCATACGCGTCGAAGATCTGTTGACATGGATTACTCATGCTACGGATTGGCATTGGGGTCTTGGGGCGATTTGGGGGAAAGGAACTCCTGCCTCCCTCACGCCCCCTTACTCTTTCACCATAGACATGGATGATGTCAATAAGGAAAAGGAAGCACTAGCGTCCAATCATTGGGAAACTCAGACAGGTGTAGTTGTTCTCAGCTACCCTCGCTACTGTAGATACAGAGGGGTCATGAAGAGGCTGCAGGGCGTTGAAGAAGATTGGTTGAGAACTTCAATGGTTGTTGCACTCGGTGGGTTCACTGCCCCTTGGAAAAACACCAGGATTCTCTTCTGTAAAGAAACATTTGATTATCCTGAGCTTGAGGGTCATGAGCTACTCTGCAATCATCTAGCTCCAAAATTAAAAGGACGACCTCGGAAGCGCAAGCGTGCAACCCAGTCTCCTACTGAATCAGAAACAGAGAGTGAAAGCTCTCAATCAACAGCCAGTTCCTCTACTTCAAAGGCTAAACCACCTCCCAAACCGGCCACAGTGAAACCAAGGTTGAGGTGTACCCTTGAAGTGACAAAAAGACCTACCAGAGGCCCATCAGTTGATGAGAGGAATTTCATGAATGCTCTGCACATTTTCATGAAAGACAGGAAAACACCAATTTCCAGGATACCAGTTGTAGGATTTAAAGAAGTCAATCTGTTCAAGTTCTTCAAGAAAGTGACTGACTTAGGAGGTTATGATGTTGTAACTGCCGGAAAGCTTTGGAAGTATGTTTATGAAGTTATGGGAGGTGACATGACCAGTACAAGTGCTGCTACTCTTTCTCGTAGACACTATGAAAAGTTACTTCTTCCATATGAAAGACATGTCAATGGTGTGAAGACTCAGCCAAAACTGAAACCTTGCCTACCACCTATTACATCTCCTCAAGCTAAGGGATCCTCCTTGCGTAACATCAGGTTAAAGCAGGAAAAAACAACTGGTGGCAAGGAGAACATCCCTCAGGAAAAGGAATCCGAGGGGAAGCTGTCGAACGAGCCTGAAATAATAGACCTTGTTAGCGACGAGCCTCCGATCAAGAACGAGGACAGAGGAAAGAGATTGCCTATCTCGGTCACAGCCACTCCACGGGCACTAAGCCCTCTGCTGAAGAAGCAGAAGCTGGAGATCCTGAAAGAGGGAGGCTTAGAAGTGACTCCTGTAACCCCAATTACCGCCGGCAGCAGGGCCTCTGTCATAAAGCAACCAGTGCTTCCTCCTCCAAGACCTGCATCGCTCATGTTCAGGGAGTCCAAAGTCTCTATCACTGTAACTCCAGATCTCCCACATCTCCTTTCACCACCAGGTCCTTCTGGTGGCAGCAGTTCCAGTAGTGGTAGCAGTAAGAGGGCAATCTACGGAAATCCCAAGGATGTCTTTGTTGCGCCACCTGTACCATCAGGAGAAATTCTCGATTTAAGGACGAAACCACGAATCAACATTGGTTCCAATCTTGAAATAACACTTGTTCCTCCTAAAATAAACCATCAACAACCTAAACCACATGTTGCACCTCATTCTCGAACCCTGCCACCAATTGCCCCAAAACCTCTTGGGTACCAATACCCTTACAAACATTCGTACATGCCCGTCGTTGACCATCGCCAGGTGTACCTTTCAGCCTCGGCCATCTACAACAACATGTACCCTAGACCTTACCCTCCCCAACAGTTGCCACACATGGTCTACAGGGAACTCCTTCGGAGGCAAGTCTTCCCCTCATTGGATGGGACCACATCCATCACTCTCGTCGGTCAGACTCCAACATCTAAGTGA
- Protein Sequence
- MATGVQPTSEYSYAYADSKRLKKTVMLTKDEVLAITEKVVIRVEDLLTWITHATDWHWGLGAIWGKGTPASLTPPYSFTIDMDDVNKEKEALASNHWETQTGVVVLSYPRYCRYRGVMKRLQGVEEDWLRTSMVVALGGFTAPWKNTRILFCKETFDYPELEGHELLCNHLAPKLKGRPRKRKRATQSPTESETESESSQSTASSSTSKAKPPPKPATVKPRLRCTLEVTKRPTRGPSVDERNFMNALHIFMKDRKTPISRIPVVGFKEVNLFKFFKKVTDLGGYDVVTAGKLWKYVYEVMGGDMTSTSAATLSRRHYEKLLLPYERHVNGVKTQPKLKPCLPPITSPQAKGSSLRNIRLKQEKTTGGKENIPQEKESEGKLSNEPEIIDLVSDEPPIKNEDRGKRLPISVTATPRALSPLLKKQKLEILKEGGLEVTPVTPITAGSRASVIKQPVLPPPRPASLMFRESKVSITVTPDLPHLLSPPGPSGGSSSSSGSSKRAIYGNPKDVFVAPPVPSGEILDLRTKPRINIGSNLEITLVPPKINHQQPKPHVAPHSRTLPPIAPKPLGYQYPYKHSYMPVVDHRQVYLSASAIYNNMYPRPYPPQQLPHMVYRELLRRQVFPSLDGTTSITLVGQTPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00165026;
- 90% Identity
- -
- 80% Identity
- -