Basic Information

Insect: Rhamphomyia laevipes
Gene Symbol: stc
Assembly: GCA_963920725.1
Location: OY987258.1:51731933-51735910[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 3.8e+04 -4.4 1.5 14 18 397 401 397 401 0.87

2 15 2 3.8e+04 -4.2 1.6 15 19 441 445 440 445 0.81

3 15 0.1 1.9e+03 0.0 0.5 4 10 474 480 473 482 0.94

4 15 3.7e-06 0.07 14.2 19.2 2 19 481 503 476 503 0.84

5 15 4.8e-05 0.9 10.7 16.8 3 18 541 556 533 557 0.87

6 15 1.9 3.7e+04 -4.1 1.4 7 13 561 567 561 568 0.72

7 15 1.5e-07 0.0029 18.7 16.5 1 19 597 615 597 615 0.98

8 15 0.0016 30 5.8 17.5 4 18 663 677 656 678 0.88

9 15 0.048 9.1e+02 1.1 12.2 1 11 718 728 718 740 0.91

10 15 5e-10 9.5e-06 26.6 15.5 1 18 745 762 745 763 0.97

11 15 1.1 2e+04 -3.2 0.9 5 10 791 796 791 797 0.82

12 15 2 3.8e+04 -6.1 9.6 9 18 809 819 799 820 0.76

13 15 1e-08 0.0002 22.3 12.1 1 16 856 871 856 878 0.92

14 15 1.7e-07 0.0032 18.5 15.3 1 19 888 907 888 907 0.96

15 15 0.71 1.3e+04 -2.7 0.1 8 12 923 927 922 927 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	3.8e+04	-4.4	1.5	14	18	397	401	397	401	0.87
2	15	2	3.8e+04	-4.2	1.6	15	19	441	445	440	445	0.81
3	15	0.1	1.9e+03	0.0	0.5	4	10	474	480	473	482	0.94
4	15	3.7e-06	0.07	14.2	19.2	2	19	481	503	476	503	0.84
5	15	4.8e-05	0.9	10.7	16.8	3	18	541	556	533	557	0.87
6	15	1.9	3.7e+04	-4.1	1.4	7	13	561	567	561	568	0.72
7	15	1.5e-07	0.0029	18.7	16.5	1	19	597	615	597	615	0.98
8	15	0.0016	30	5.8	17.5	4	18	663	677	656	678	0.88
9	15	0.048	9.1e+02	1.1	12.2	1	11	718	728	718	740	0.91
10	15	5e-10	9.5e-06	26.6	15.5	1	18	745	762	745	763	0.97
11	15	1.1	2e+04	-3.2	0.9	5	10	791	796	791	797	0.82
12	15	2	3.8e+04	-6.1	9.6	9	18	809	819	799	820	0.76
13	15	1e-08	0.0002	22.3	12.1	1	16	856	871	856	878	0.92
14	15	1.7e-07	0.0032	18.5	15.3	1	19	888	907	888	907	0.96
15	15	0.71	1.3e+04	-2.7	0.1	8	12	923	927	922	927	0.80

Sequence Information

Coding Sequence: ATGTCACAATTTTCTCGACAAGATCAAGATCCCAGTGGAAATTTTCATCATCAATTTAATGGAATTAGTTCAAATACAAATTCTGGTATTAATGATGGCACtgggaataataataattacgttgatttcaatcaatttataatGCAACATAATTTTGGTAATCCTTTAAACAATAGCGGTGGTGGTGCAGCTGGATATCATCATCAGCAACAACACCCGCAACAACAAATACCAAATAGTTATGGATATTATTCAAATCAGgtaccatcaacaaattatataaatgactCAAACTATTATCAATCTAATACTACCCAACAATCATTAATACCGCCATCGTCcacaataaattcattattttatggtACACCAAATTACGATACAACATTTTCATCAACATCAAATTTAATACCAACAGCAGCTGAATTTGTACCACGTTTTAATACTTTAACATTAAATGatgaatcacaaaaaaaatcaacatcaataccatcatcatcatcaatgacacaattaaatatgacaaatttGTCACAACagcaaaattctaataaaaaaaatcaagattacACCAACAATGTAAAATCATCAAGAGATTCATTAACAAAACCAATATATAATAGTAATTCGAATTTACAACAAAGcacaaataaagataataattattcatcATCGTCAATATCACGTCATTCGTCAAATTATACTCATGGAAATGGTAATAGTGGAAATCGTTTGGAAACAGAAAATCGACGATCACAAAATAATCGTAATGATAATATTTCAACATCATCGTCATCATATcgtaatcaacaacaaaaatatgataataatcgTCATAATAAACGTCGTGATAATTGGAATCGTAATCGCGATCGTGAATTATTATCggatacaaatattaatagcactagtagtaataatagtaattctGGTAAATATGATCGTCGAATTAATGATAATGATCGTCgtaataatgataattcaattgaaaataattatcatcatcagcagcaacaacaacaacattatcaAAAGGATAGCCCTAAAAAATTAACACCAAAATCACCACAAAAACAAcatcaaattaattatcattcgcatcatcaacaacaacaatataacAATTCTGATAATGAAAAGTTACCACAacgtgaaaaattaattaaagaaattgaagcCCGTCGATTGGAATGTCCAGTATGTGTTGAAACAATTAAAGTACATCAACCAGTATGGTCATGTACAAATTGTTatcatatatttcatttaaattgtatcATTAAATGGGCATCTTCGTCAAAATCTGAAGATGGTTGGCGTTGTCCAGCATGTCAAAACATATCTAAACAAATACCACgtgattattattgtttttgtggTAAAGTACGTAATCCAGAATTTAATCGTAACGATTTAGCACATAGCTGCGGTGAATTATGTGGCCGTAAAGATAATTGCCAACATTCGTGTACATTACTTTGTCATCCAGGACCGTGTCCGCCATGCCAAGCATTAGTAACACGTGAATGTGGATGTGGCAAAACAAGTAAATCAATGCAATGTCATATGAAAGAAGAAATGGAATGTGATTTAGAAtgtggtaaaatattaaattgtgaattaCATAATTGTGGACAGAAATGTCATCATGGCAAATGTCCACCGTGCgacaataaaattgaacaaaattgtCATTGTGGTAAACAGGATCGTCAGGTGGCATGTACAAGAGATTCAAATGATAAGAAATGTTATTCATGCGGTAAACCATGTAATAAATCATTGGAATGTGGTAATCATAAATGTAAAGATTGTTGTCATTTTGGTGATTGTAAACCATGTAAATTGAGTCCTGAATTGATAACATCATGTCCTTGTGGAAAATTACAGATTTTGAAAGGTGAAAGGATATCATGTTTAGATGCGGTACCAGTTTGTAGTGGAACTTGTGGCAAAACGCTTAAATGTGGTCCACCAGCCCATCCCCATCACTGTTTAAGTAAATGTCATATTGGCAATTGTCCACCATGCAACAAGCAAACTGCTGTTAAATGTCGTTGTGGTCATATGGATCAAATGATTAAATGTCGTCAATTATCAACACGTGCCGATGATGCACGATGTAAAAAACGCTGTACGAAAAAACGTAGTTGTGGCAAACATAAATGTAATCAAGAATGTTGTATTGATATTGATCACATCTGTCCAATGCCATGTAATTATACGCTGTCGTGTGGTAAACATAAATGTGATCAACCATGTCATCGTGGCAATTGTCCACCATGTTATCGAAGTTCTTTTGAAGAATTATATTGTGAATGTGGTGCAAATGTTATTTACCCACCGGTTCCATGTGGTACAAAGAGACCAACATGCCTTCAACCATGTTCACGACAACATGTTTGCAGTCATCCGGTACAACATTTTTGTCATTCAGCACCAAATTGTCCGCCATGCATTGTATTGACTACAAAATGGTGTTTTGGACAACATGAACAACGTAAAACAATTCCATGTAATCAGGAAAGTTTTAGTTGTGGTATGGCTTGTAATAAGAATTTACCATGTGGTCGACATAAATGTATTAAACCATGTCACGAAGGTCCATGTCAAATTGAAGgtgaaatttgtaaacaaaattgtaCAACAACTCGTTTGGTATGTGGTCATAAATGTAATGCACCATGTCATGAAGGTGATTGTCCTGAAACTCCGTGTAAAGAAATGGTTGAAGTAACTTGTGAGTGTGGAAATCGTAAACAAATGCGAACATGTCATGATTTTTCAAGGGATTATCGTCGTATAGCAACTGCAGCATTAGCATCATCAATGGCTGAAATGCAACGAGGAAATAATGTTGAACTAAGTGATATTATGGGGCCAATTAAAATGACCAGCAATAAAactctTGAATGTACAGAAGAATGTCGGGTTCTTGAACGTAATCGACGTCTTGCAATTGGTTTACAAATTCGTAATCCTGACACTGCACAAAAACTATTGACACGTTATTCCGATTTTATACGTAGTTGGGCGAAAAAAGATCCACATTTGGTAAAAACAATTCACAATGCCTTAACTGATTTGGTTAAATTAGCGAAAGAAAGTAAACAAAAATCGCGTCGACATTCATTTCCATCAATGAATCGTGAAAAACGACAATTAGTACATGAAATGTGTGGCATGTTTGGTGTTGAATCAGAAGCATATGATGCTGAACCTAATCGTAATGTTGTTGCAACTGCATACAAGGAGAGAtcGTGGCTGCCAGCTATGAGTATTATGGATGTTATGCAAAGAGAAAGCGGTCAGAGACGTGTACCCGTACCAAATAACAATGCATGgggtattaaaaaataa
Protein Sequence: MSQFSRQDQDPSGNFHHQFNGISSNTNSGINDGTGNNNNYVDFNQFIMQHNFGNPLNNSGGGAAGYHHQQQHPQQQIPNSYGYYSNQVPSTNYINDSNYYQSNTTQQSLIPPSSTINSLFYGTPNYDTTFSSTSNLIPTAAEFVPRFNTLTLNDESQKKSTSIPSSSSMTQLNMTNLSQQQNSNKKNQDYTNNVKSSRDSLTKPIYNSNSNLQQSTNKDNNYSSSSISRHSSNYTHGNGNSGNRLETENRRSQNNRNDNISTSSSSYRNQQQKYDNNRHNKRRDNWNRNRDRELLSDTNINSTSSNNSNSGKYDRRINDNDRRNNDNSIENNYHHQQQQQQHYQKDSPKKLTPKSPQKQHQINYHSHHQQQQYNNSDNEKLPQREKLIKEIEARRLECPVCVETIKVHQPVWSCTNCYHIFHLNCIIKWASSSKSEDGWRCPACQNISKQIPRDYYCFCGKVRNPEFNRNDLAHSCGELCGRKDNCQHSCTLLCHPGPCPPCQALVTRECGCGKTSKSMQCHMKEEMECDLECGKILNCELHNCGQKCHHGKCPPCDNKIEQNCHCGKQDRQVACTRDSNDKKCYSCGKPCNKSLECGNHKCKDCCHFGDCKPCKLSPELITSCPCGKLQILKGERISCLDAVPVCSGTCGKTLKCGPPAHPHHCLSKCHIGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHICPMPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGANVIYPPVPCGTKRPTCLQPCSRQHVCSHPVQHFCHSAPNCPPCIVLTTKWCFGQHEQRKTIPCNQESFSCGMACNKNLPCGRHKCIKPCHEGPCQIEGEICKQNCTTTRLVCGHKCNAPCHEGDCPETPCKEMVEVTCECGNRKQMRTCHDFSRDYRRIATAALASSMAEMQRGNNVELSDIMGPIKMTSNKTLECTEECRVLERNRRLAIGLQIRNPDTAQKLLTRYSDFIRSWAKKDPHLVKTIHNALTDLVKLAKESKQKSRRHSFPSMNREKRQLVHEMCGMFGVESEAYDAEPNRNVVATAYKERSWLPAMSIMDVMQRESGQRRVPVPNNNAWGIKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00644710;
90% Identity: -
80% Identity: -