Rlae032862.1
Basic Information
- Insect
- Rhamphomyia laevipes
- Gene Symbol
- Pias3
- Assembly
- GCA_963920725.1
- Location
- OY987259.1:29328010-29336417[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.46 8.7e+03 -2.3 0.4 20 39 260 279 250 282 0.83 2 2 4.7e-26 8.9e-22 77.7 5.7 1 50 383 432 383 432 0.98
Sequence Information
- Coding Sequence
- ATGAGGAAAACACGGTCTCAAACACAAGCGGAAAATGGAACCGCCACTAATTCTAAGACCAGCTCCAATCCACCACCAACAAATTCTTCTAAGCGGCAACATAGTCCTCCTAATGTCGGTTATCATcaacaaaattcttttaatcaAGCTTTTGAAGCAACAATACGACATAGTGATTATGAAAAAGTAAAGAATATGATACAATTTTTTAGAgtttttgaattacaaaaactgttattatcattaaataaaaataataaaggtaGAAAATCTGATTTACAAAAACgtttaattgatgaattaaatattaattatcatataattGCACCACAAATAcgtgaaatatataaatcttgTGGTCCCGATCCACAAGAACTAGCTAATAAAGATTTGAGTAATCCAATTGGTGGACCACCACCATATAAAAGAATGTATCAATCACAATTAACAATGCCaatacaacagcaacaacaacatacAAGCGGTGGTATGATTGGTAATAATATTGTGGTACCATTTACTAGTAATATAGTATCTGGCTATCCAATACATCCGGATGTACGATTAAAAAAGCTggctttttatgatatattagcAACATTAATACAACCATCAACATTAGTACCACAAAATGCCCAAAGATTACAAGAGGctgcattttattttacattaacacCACAGCAAGCAACCGAAATAGCATCAAATCGTGATATACGAGGTGGTTCAAAAACTGAATATACAATACAAGTACAATTACGTTTTTGTTTATTAGAAACATCATGTGAACAAGAAGATTGTTTCCCACCAAATGTTATTGTGAaagttaacaataaaatatgccAATTACCTAATCCAATACCAACAAACAGACCAAATGTAGAAGCTAAACGGCCACCACGACCTGTTAATGTTACTATACATGTTAAACTATCACCAACAGTTACCAATAACGTTACAGTTCAATGGTGTCCAGATTTTACTCGTGGTTATGTTCTGTCTGCATATTTAGTACGTAAATTGACATCATCACAATTGTTACATCGTATGAAAACTCGTGGTGTTAAACCAGCTGATTATACAAGAgctttaattaaagaaaaattaactgAAGATGCTGATTGCGAAATAGCTACAACAATGttaaaagtttcattaatttGTCCATTGGGTAAAATGAAAATGTCAATACCATGTCGCGCATCAACTTGTTCTCATTTACAATGTTTTGATGCTTCGTTATTTTTACAAATGAATGAACGTAAACCGACTTGGAATTGTCCAGTCTGTGATAAACCAGCTGTTTACGAAACCTTAGTTATTGAtggatattttcaaGATGTTTTAGCATCACCATTAGTTACATCTGATGATACAGAAATTCAATTGCACAAAGATGGTTCATGGAGTACACATATTATGCGAAATGATACACAAGTATTAGATACATCTAACAAATCTGTTCAAAAAGTTGAAGTTATTTCTGATGATTTAGAAGTTATAACAACAGAACCAGAAGTAAAACCAACTGCAGCCAAAGCTATTACACAATTGCCAGCCGGTACAACAGTTACTACAAATAATGAACCAACTTCAACTACAAATAGTGATactgttgATTTAACTTTAAGTGATTCAGATGATGATTTACCATTAAAAAGAAAGACTGCACCATCAACACCAAATAGTAATAAAACATCAACTAATAATAATCCAACAAATGGACAGTCGAAACAACCAGTTGCTGCTGTTAAAACTAAAAACGAAGAATTAAATCTATGCTCATCGATTATATCGTTAGATTCACCATCGCCGCCATCGAGTCCAGTTAACCTTGTTTCAAATTCAgGTAGTACAGGCAGTAGTGTTTCATCAACAACTTTACCATTTTGTCCATTACCAGCTAATCCACTTGATACCGATAGTCATAATCCATCAAATTTTGGTATAAATCCATTTGCAGATCAAACATTAACATCagcatttaattcaattaatcgACTATATAATGCATCTACTAATCCAAATCAACATTCCAATGTACAACAAGTGCATCCGTATCGTAGAGAAGATGATtggtcaaataaataa
- Protein Sequence
- MRKTRSQTQAENGTATNSKTSSNPPPTNSSKRQHSPPNVGYHQQNSFNQAFEATIRHSDYEKVKNMIQFFRVFELQKLLLSLNKNNKGRKSDLQKRLIDELNINYHIIAPQIREIYKSCGPDPQELANKDLSNPIGGPPPYKRMYQSQLTMPIQQQQQHTSGGMIGNNIVVPFTSNIVSGYPIHPDVRLKKLAFYDILATLIQPSTLVPQNAQRLQEAAFYFTLTPQQATEIASNRDIRGGSKTEYTIQVQLRFCLLETSCEQEDCFPPNVIVKVNNKICQLPNPIPTNRPNVEAKRPPRPVNVTIHVKLSPTVTNNVTVQWCPDFTRGYVLSAYLVRKLTSSQLLHRMKTRGVKPADYTRALIKEKLTEDADCEIATTMLKVSLICPLGKMKMSIPCRASTCSHLQCFDASLFLQMNERKPTWNCPVCDKPAVYETLVIDGYFQDVLASPLVTSDDTEIQLHKDGSWSTHIMRNDTQVLDTSNKSVQKVEVISDDLEVITTEPEVKPTAAKAITQLPAGTTVTTNNEPTSTTNSDTVDLTLSDSDDDLPLKRKTAPSTPNSNKTSTNNNPTNGQSKQPVAAVKTKNEELNLCSSIISLDSPSPPSSPVNLVSNSGSTGSSVSSTTLPFCPLPANPLDTDSHNPSNFGINPFADQTLTSAFNSINRLYNASTNPNQHSNVQQVHPYRREDDWSNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00644707; iTF_00643764;
- 90% Identity
- -
- 80% Identity
- -