Rlae030251.1
Basic Information
- Insect
- Rhamphomyia laevipes
- Gene Symbol
- pnr
- Assembly
- GCA_963920725.1
- Location
- OY987258.1:36805723-36809988[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.8e-17 5.6e-13 49.3 4.6 1 35 590 623 590 624 0.98
Sequence Information
- Coding Sequence
- ATGTGTAATTTACCACCAAATTTTTATCATGTTTGCCGTTTGTGTTTATCAATGGTTACTGattgtgatttaaataaaatttatatatttaaacctGATCATCATATTTATgtaccaaaatataataaaacaacatcTAAAATAGTagataattacaataaatcaaGATCATCACCAAATCCATCATGCTCCTCAACAAAAGTAAacacagacaaaaaaaaatgtacaattcaATCGACTAATAGTAGTAACAGCagcgatgatgatgatgataatgatgatgatggtgtaGAAGAAGAATGTGGTGAAGAAAATAATGATACGACGCATACATTGAAAGaatcaacaacaacacaaaCAATATTTACTTCTGCTGCTAATGATAATCTACGAATTGGAATTGATGAATCATCAGCCGATTTGGATATTCCAgatcttatattaaattgtttgtcTATTGAAgtaCATCCAGATGATGGTTTACCTGCCGTTATTTGTAAACATTGCAAAATACAATTAGATTCCTGTAATAAATTTCGGAAAATGGCAAAAGAAGCTCAATGTgcattgaaaaattttattcaatatgcCTCTAAATTATCTGGCAACACCgaggAAGTTCTAAAGAAAACAACTGGAACATTAAATGAACTTTTATCAAACTCTCGACGAGAAATATCAGAACAATTAGCAGCAGCAGCTTTAACTGAACTCGGAAACTcttctaataataatagaattataaaaagatatagtaataattacacgaatattaataataatataaaatcaaatatactcAATTATGATGAAgataataattcaaaacaaatatcatttataccaacaaaaaaaattaaaattgaaaatgatttttataatgaatgtgaaaatgaaaatcatgaACAACAAAATGCTATAATGAATTCACATCTCGAAAGTGCAGCTGTTTTAATGGATATAAGTCGTAAAGTTATTATATCACCACCAAATTCTAATCCACAATCTCCAAGTATCTCGAAATTAAATGATGCtagtattaaaaattctgtGATAGATGTAAAGCATCAAAAAGGAAATTCTGATGAAGGTAGTAGTAATATATGTATTCGTCGAGAATCTACAAATcccagtaataataataataataattctaaagttATGAACAAaagcttaaaatatataaaacttgaaAACGAAGAAATTAGTAATGAAGAGATATCCAATGACAGTTCAGATCCTGGTAGATTAGAAATGGATATTGTATTACAAGACCTGTCAACGTTTCCTTCTGTTAGTGAATCGCATGTTCGAAACGAGATCGAGACACCTGAAAGTACAGATTCTGACAGTCCGCCAGCTGATCCTGCTACAACTCAGCTGTGGCAAGCTCTAGCACATTCAACtgTAAATGGTAGTAAAAGTGAAGCCACACAATTATTAAAACGAATGATAACATGTAGAAATTTTGGTTTAACATTATCTCCACCAATAAATCCACACTGTAATATTGTCTCTGAACCGATACCACTATTAAAGgaaGATAAATCGTCCGCTTTATTGTTAAATAAGTCTGGAAGAAGAAAACAAGCATGCCCAAGCAAAGCAGAATACtcgaaaaatttagttaaaaaaactgataacgatttaaatgaagaaaatcCAATGTCTAATACATGGTCAAATACAACTTCGTTTATAGATTCCGAAGAAAAACATaagcAGGGAAAAGTACTTAATGCTGGAGTCTGTCAAAAAGATATGTCATGTACGAATTGTGGGACATTAACTACAACAATTTGGAGGAGAAATGTTCGTGGCGAAATGGTTTGTAATGCATGTGGTTTATATTATAAGTTACATGGTGTTAATAGACCTCATTCAATGAGAAGAGATACAATCCATACCAGGCGCAGAAGACCTAAAGGAAGCAATAAAGCTTCCAGaagaagaaatAAGACATCTGATATTAATACATCTGATATGGACAATATTGAacaattgaaacaaaataaatcagATATGCAGTCACTACAAAATCATAACTTATTGTTAGCTTTAGGGGGAGTTGCTCATAATAATCCAACATTTTCAATTCCAgaTTATTCTCATATGTTTTGCTCTTCTACAATAAGTATGGTTCCGAAAAAAGAAGAAGGTAACTCTCCAAAATGTAACTATAGTGATGACATCagcaataataatgaaaatgataattgcAATTTACCATTAAATCTAGTTGCTAATCATCAATCTACGGAAGTCAATAACAGTAGTatgaactaa
- Protein Sequence
- MCNLPPNFYHVCRLCLSMVTDCDLNKIYIFKPDHHIYVPKYNKTTSKIVDNYNKSRSSPNPSCSSTKVNTDKKKCTIQSTNSSNSSDDDDDNDDDGVEEECGEENNDTTHTLKESTTTQTIFTSAANDNLRIGIDESSADLDIPDLILNCLSIEVHPDDGLPAVICKHCKIQLDSCNKFRKMAKEAQCALKNFIQYASKLSGNTEEVLKKTTGTLNELLSNSRREISEQLAAAALTELGNSSNNNRIIKRYSNNYTNINNNIKSNILNYDEDNNSKQISFIPTKKIKIENDFYNECENENHEQQNAIMNSHLESAAVLMDISRKVIISPPNSNPQSPSISKLNDASIKNSVIDVKHQKGNSDEGSSNICIRRESTNPSNNNNNNSKVMNKSLKYIKLENEEISNEEISNDSSDPGRLEMDIVLQDLSTFPSVSESHVRNEIETPESTDSDSPPADPATTQLWQALAHSTVNGSKSEATQLLKRMITCRNFGLTLSPPINPHCNIVSEPIPLLKEDKSSALLLNKSGRRKQACPSKAEYSKNLVKKTDNDLNEENPMSNTWSNTTSFIDSEEKHKQGKVLNAGVCQKDMSCTNCGTLTTTIWRRNVRGEMVCNACGLYYKLHGVNRPHSMRRDTIHTRRRRPKGSNKASRRRNKTSDINTSDMDNIEQLKQNKSDMQSLQNHNLLLALGGVAHNNPTFSIPDYSHMFCSSTISMVPKKEEGNSPKCNYSDDISNNNENDNCNLPLNLVANHQSTEVNNSSMN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00644689;
- 90% Identity
- -
- 80% Identity
- -