Rlae027774.1
Basic Information
- Insect
- Rhamphomyia laevipes
- Gene Symbol
- GATA4
- Assembly
- GCA_963920725.1
- Location
- OY987257.1:50776256-50778529[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9 1.8e+04 -3.5 0.3 1 4 424 427 421 428 0.73 2 2 1.4e-18 9e-15 55.0 5.8 1 34 467 499 467 501 0.97
Sequence Information
- Coding Sequence
- atgGAAGTTGAAAAATCTGTACAAATTAAACTgaaagaaaatcttaaaaatgattcaaaatcgGATCAATTGAATAATTCATCAGTAACAGATGAACATCAACagttacaacaacaacatcttCAACAAACTAGTCAACAATTGTCaccacaaaatttacaaattcaaacaTCACAACAATCCGAACTAAATTCGGATATAATTCGTACTACTGATTTGATAGGAGCATCGTCACCATCAGTTACATCATCTGCAACATCAACTACAAGACCACTTATACCTGGTCAACAACGTCGTATATTAACAACATCAGGAACTTTAAGAGAAGTTAATGATCAACGTGAAATTGATTCAGAAGAATATCATTCTAATGATATTTCAACAATGGCACCATCACGTACTGATGAACATTTACAACAGCAACATCATCCgaacaacaataataatcatcatcatcaacagcaacaccaacaattatataataattatgaaaattcacaAGAAATTGCTGTTTATGAGACAagagaattaattaaatcagaAGATAAAGATCGTGATGATTCACCATCAGCAGgtcaacaacaaattttatatacatcagAAATATCAGCTGCAACACAACAAGAAACTGTAGTTGCTATGGGTCGTGGTGATATAACTGTAccaacatcatcaacaattcaacaaaataatcatCATAATCAGCACCAACAACACCAGCAATTACATACAACTGTGACAGTAGAAAGTCATCATCGTTATGATAATCCACATCGTATTATTGTTGATCAAAATGGTGAACAAATGGTTTATTTTGCAGAACCAATTACTGGTTTAGGAACTGAGGGTGGTAAAACATTTACGAATTTGGGTACAACATCAACATTACATGTACccgataattatataaattatccatATACAATAACACCAGAATTTAATGTTAAAccattatttatgaataatgaTCCGCCATTGAATCAAGTACGACCAAATGCTCATTTTGGATCAGTACAAAGTAATACTGCAACCTATGATCCAAATTCAACTGGTGGTACTGATTCACCATATTGGACAACAAATCAACCTGAATATAATATTaataataattttggtaatatgtaTGCTATTCCGGATGAATATCCAGCGCAAATGCAATGGTCTACAACATATAATCAAAGTGGTACAACAAATGGTAATAGTTTGCATGGTGGTAATTGTCGAATTTGTGGTTCATTATTAGATCGTAAAGATAATATTGAAATGATATGTCAAAATTGTATACGAATTCAACTTGGTGTACAGCATTCAGCAACTATACACCGAAATACTAGTGTACGCCAATCAAAACCAAAAACACCATCATCTATATCAAATAGTCGTCGGAATAATGTAATATGTGCAAATTGtaaaacaacatcaacaacactTTGGAGGCGTAACAATGATGGTCAACCTGTTTGTAATGCATGtggattatattttaaactacatAATATGCATCGTCCGTTGAGTATGAAAAAGGAGGGTATTCAAAAAAGAAAACGTAAACCAAAGAATAATGGAGGAGGATCAATAAAACCAACATTACCAAgTATGATGTTACATCAAACAATTTATCCATCACAGGTACAATCTGGTCCTAGTCATCATGATGATTTACCAATATCTACAGTAGCAAATCATCATTTAATGCCAATTGAAACACATTCATCAATAAGTCGTCATCATATTGTACAATTACCATCAACATCATTAGGACAATCTCATCATACACAAGTTATTAGTCCACCAATCCATCAACATTATACAAATACTGGTGGTGGTGTTGTTTGTGAACCATCATCACAAAGTCAATCACCACATTTACCAAATTCGAACACATTAAATAGGCAAGTTACACAAActGTACCACCAATAGATGAAAATCGTTCAACAAATGGTGAAATTACAACTAGTGTCATTACAAGCACTGGTATACCAGATAGATctgcaaataattaa
- Protein Sequence
- MEVEKSVQIKLKENLKNDSKSDQLNNSSVTDEHQQLQQQHLQQTSQQLSPQNLQIQTSQQSELNSDIIRTTDLIGASSPSVTSSATSTTRPLIPGQQRRILTTSGTLREVNDQREIDSEEYHSNDISTMAPSRTDEHLQQQHHPNNNNNHHHQQQHQQLYNNYENSQEIAVYETRELIKSEDKDRDDSPSAGQQQILYTSEISAATQQETVVAMGRGDITVPTSSTIQQNNHHNQHQQHQQLHTTVTVESHHRYDNPHRIIVDQNGEQMVYFAEPITGLGTEGGKTFTNLGTTSTLHVPDNYINYPYTITPEFNVKPLFMNNDPPLNQVRPNAHFGSVQSNTATYDPNSTGGTDSPYWTTNQPEYNINNNFGNMYAIPDEYPAQMQWSTTYNQSGTTNGNSLHGGNCRICGSLLDRKDNIEMICQNCIRIQLGVQHSATIHRNTSVRQSKPKTPSSISNSRRNNVICANCKTTSTTLWRRNNDGQPVCNACGLYFKLHNMHRPLSMKKEGIQKRKRKPKNNGGGSIKPTLPSMMLHQTIYPSQVQSGPSHHDDLPISTVANHHLMPIETHSSISRHHIVQLPSTSLGQSHHTQVISPPIHQHYTNTGGGVVCEPSSQSQSPHLPNSNTLNRQVTQTVPPIDENRSTNGEITTSVITSTGIPDRSANN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -