Rlae030352.1
Basic Information
- Insect
- Rhamphomyia laevipes
- Gene Symbol
- CSRNP3
- Assembly
- GCA_963920725.1
- Location
- OY987258.1:38181493-38184271[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-96 4.2e-92 309.1 5.0 2 217 277 477 276 478 0.91 2 3 0.68 2.6e+04 -4.1 2.4 68 84 610 626 554 671 0.50 3 3 0.29 1.1e+04 -2.9 0.5 76 103 843 869 778 883 0.56
Sequence Information
- Coding Sequence
- ATGTTTAGGCCACtcaaaaattttttaacatatttacaaaaaaatacgaATGGTACAACAATATTTGGTAACTCATCAAATATGAATCCAAATCCGGATTGTAATATGTTACCAGTAGATGATAATAGTTTGACAAAAGCTGATTTGACACCTAATCACAATGAACCAAATAAATCAACAGAAAGTACATCACAAATTTTAACAAGTGAAGTTATTGAATTGggtaataatgatgaaaatgatgataaagAACTTAAACTTCAATCGCCAGCAaaagattattttgaaaattgtaatgttATTTCTATAGAACTTGATGATGACAATGAGTTACAAACAGAAGAGTTCCCTGCAGGCGAAATATTATTActtgatgataatttaaatacatcttTTCCACTGGATCCGATAACAGATCCACTTGCTATAGAAGAGGATTTCcataatgaaattgtaaataatgataatttaactaataaatcaTCATCAGTATCAGATATTGTATCAACAGatggtaatattttatatattattgatgtTGAAGATATTAAAGAACAAggaattaaaattgatgaattaaatacTGATGGTAATAAATCTTTGATTACAAATACATCATCACTACAAAATTCTGTTGTTTCTGTTGAAGAGCAAGAACTGCGGAGTGATGGTTCAGATTCTGGTCTTGGATCGGAAACTTCAGTGTTACAAACAACAGCGAATACTTGTAATAGCAATCAATTAGAATCACCAATTAAAGTTACAATACCAtcttatagtaatttaaaaagacGTTCAGAAAATGATACAATATTGTTTGAAAAACGACCAAAAAGATCCATTAATTTTGAtggtgttaaaatttattattttccacgTATACAAGGATTTGCTTGTGTTCCATCCCAAGGTGGCTGTACATTAGGAATGGGATCTCgacatattcatttaaaaacttttacacTTGCCGAACATGCAGCCGAACAGAGAAGAACACATAAATTACAAATGCAGGAAATTAATCCGCGAGGATCATCGAGTGAAGAATCAGATAGTGATGACGAATTAAGTGATGGCGGCAGTAGTTCAGACTTAGATACTGATGCAAACGGATTTTTACAACCTGTACCGGCGAAACAAAGAAGGGCATTACTTAAAGCAGCGGGAGTACGTAAAATAGATCCATTAGAAAAAGATGAATGCCGTGCTATTAGAAGTTCGAGAGAATTTTGTGGCTGCAATTGTAGAGGATATTGTGATCCAGATAGTTGTTCATGTAGTCAAGCGGGAATTAAATGCcagGTTGACCGACCGAATTTTCCATGTGGCTGTACTAGAGATGGTTGCGCTAACATTATTGGTAGAGTTGAATTTAATCCAGGAAGAGTACGTACACATTTTATACACACAATAATGCGACttgatttagaaaataaacAAACTAGAACGGATAATAATATCCATTTAGGAAGTTTGCATAATTCAAATTCGATTTtatatggtaataataataattgtgaaacAAATAAGCTCTGTGGATCAGTATACAATTCTTCCGATGATAATATTCGGGGGCAGTCATATAATCAAGTCCAACACACAtcgtataatcaaaattatatgaatcaTAATGATGTAGTAACAACGACTAGTGCCGGATGTTTTTTtgatcatcaacaacaacaatcacagATCGACACACGAattaataatcaacaaaatttatatggttTTCAAATGActacaaataatgataatacaCATATGATAGATTATAGTACGGCAAATAATCAATTACACTATTACAATGATCGTACCTCAGCATCATATTTTATGAGTAATagttatcaaaatcaaaattatactaaCTATCAATCAAGTTATAATCACAATAATTATCTTAATTCACCACAAAGTAATTCTACCgatattaatgaaatacataaacaattacatacaaaaaaagaTAATGAATTAACTGCCAATAAATATATTAGCTTAAATTCTTTAAGCGGAAATACAACACAAATAGATGCCATTAATGATTTGCTGCATAACAATCGTAATACACCACCAGTTAAATCCATTAAGAATTcaacaaatttagaaattaattgtaatgttTCTTTAAATGATGATGCTGCTATGTTAATAAAACCAATGGTACCGATAACAATGGCACATATAGCTAGTTCGTCTACCTTAGCACCATCAGCTAATACTCATTTATTATCAACTTCAATTACAGAAGGAACATCAACGTCAATTTCTACATCATataatacaaatgaaattagtattaataataatagaattgaTATCTCAACAGGTActtcaaaaacaattaatatagatgaaaatatagatgattgtaaaaaaatgtttaatgaacgGCAATCTCAAAGTTGGCCAGATGAAAAAACTGAAGTGGAATCTACTACAATAAATCATATCAATAAAGAACACAGTGGATGTGATATCGATAATTCGCCAACAATGCCTAATCAATTGGCTttcaaattagaaaatgaaattgaagaaaaagggaaaattaatgatgataaaaatcctactaattattatgatataaCTAATTCggaaaataataatgacaatagtaataattttatttgttttccatcagaaaatgaaaatcaattaactgaaattaaAGATGAAGTTGAATCAGCATTTgcttaa
- Protein Sequence
- MFRPLKNFLTYLQKNTNGTTIFGNSSNMNPNPDCNMLPVDDNSLTKADLTPNHNEPNKSTESTSQILTSEVIELGNNDENDDKELKLQSPAKDYFENCNVISIELDDDNELQTEEFPAGEILLLDDNLNTSFPLDPITDPLAIEEDFHNEIVNNDNLTNKSSSVSDIVSTDGNILYIIDVEDIKEQGIKIDELNTDGNKSLITNTSSLQNSVVSVEEQELRSDGSDSGLGSETSVLQTTANTCNSNQLESPIKVTIPSYSNLKRRSENDTILFEKRPKRSINFDGVKIYYFPRIQGFACVPSQGGCTLGMGSRHIHLKTFTLAEHAAEQRRTHKLQMQEINPRGSSSEESDSDDELSDGGSSSDLDTDANGFLQPVPAKQRRALLKAAGVRKIDPLEKDECRAIRSSREFCGCNCRGYCDPDSCSCSQAGIKCQVDRPNFPCGCTRDGCANIIGRVEFNPGRVRTHFIHTIMRLDLENKQTRTDNNIHLGSLHNSNSILYGNNNNCETNKLCGSVYNSSDDNIRGQSYNQVQHTSYNQNYMNHNDVVTTTSAGCFFDHQQQQSQIDTRINNQQNLYGFQMTTNNDNTHMIDYSTANNQLHYYNDRTSASYFMSNSYQNQNYTNYQSSYNHNNYLNSPQSNSTDINEIHKQLHTKKDNELTANKYISLNSLSGNTTQIDAINDLLHNNRNTPPVKSIKNSTNLEINCNVSLNDDAAMLIKPMVPITMAHIASSSTLAPSANTHLLSTSITEGTSTSISTSYNTNEISINNNRIDISTGTSKTINIDENIDDCKKMFNERQSQSWPDEKTEVESTTINHINKEHSGCDIDNSPTMPNQLAFKLENEIEEKGKINDDKNPTNYYDITNSENNNDNSNNFICFPSENENQLTEIKDEVESAFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -