Rlae019418.1
Basic Information
- Insect
- Rhamphomyia laevipes
- Gene Symbol
- bdp1
- Assembly
- GCA_963920725.1
- Location
- OY987255.1:139551667-139553643[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.3 1.7e+04 -2.9 0.0 24 41 18 35 18 35 0.86 2 3 2.9e-10 9.1e-07 29.9 0.0 2 44 375 417 374 418 0.96 3 3 1.3 4.2e+03 -1.0 0.1 14 28 450 464 448 466 0.79
Sequence Information
- Coding Sequence
- ATGTCTGGCAGACGTCCTAGAGTTAAGGCAATTGCCAATATTGGtgttaaaaggaaaataaaagaGGAAATTGTAGATAAACCTGATGtagaaataaaatcaaaagaaGAACCacctaacaacaataaaataataaaagccGAAATACTCCCTGTAACATCTGATATACCTATTCCTACTACTACTAAAACCAGTTCCGCCGGGGAAGaaccaaaaaatattccatCAATTGATAATTCTGATGAAAATCTAAAATCATCATTATCCGATTTACAACAAATACGTCCCAGGCAACGTATAAAAGCAACACCATGTTTTGATGTACGACGCAATAGTATACATGGTCCAAATGatgaacaacaacaaattgaaaattttagcgGACAAATGAAAGAACCTAAATTACCACCACCATCagcacaaaatttatttaatagtaatCGATCACCAATTGCAAATCGTACACGTACAGAATCAGTTAGTTCAataacacaacaacaaaatgtacccacaacaaatacaacaacatTGAACACATCAGTTCCACCCGACCATAATCATCAGCAccaacaatattttcataataattatccaCCATCACGTGAACATATTCCGCCGCGTCATCGTAAAATTTCTACAATGGAAGATGCACAACGTTTATCAGCTGCTCGaaaagaatttaattcaaaatatagtcGAAAGACACCTGAAAAGTctgtattaaaaatgtttgaattcatttattataatccATCATCAAATCCAatgaaatttgatgaaaaatgtCAAGCATCAtcgaataaattattgaataatgaaTTGCCATCAACAGCTAAATtagaaaatgagaaaaatttgGAAACAATTGAGTCTAGCAATATACAGGATGATGGTTTAACTGATGAACcgaaaaataatgaaactgGTACAACACCAAGTGTTTTACCAGTACCACAATTGAAATTAGGACCAAATGGTGAAATAATATTAGATGAGAaatcattattaattgaaaCAACGGCTGAAAAACAAATACGTTCGAATTTAGCAGCATcaaagaatttcatttatttagatGAATATAGTGGTAATAATGGTTTTTATAGTCGTCAAAAACGTACAAAAGATTGGAGTCCAGAAGAAACGATAAAATTTTATCGTTGTTTACATACTGTTGGTACAGATTTTTCATTAATGTTAGCATTATTTCCAAATCGTACACGACGtgatctaaaattaaaattcaaaaaagaggaaaaaaataatggcaatttaattaataaagcaATTTTATATCCGAAAGCATTTGatattgaagaattaaaaagtGAATTTCAACGTGAAGAAGaattaattgaagaaaaacGTAAACAATGGAAAGAAAttcaagaacaacaacaacaacaggatcaccaaaataatttggataataATAAGTCTTCGTCAAATTCAAAAGCTGGTCGTGTATTAACTAAAGGTGATTTagcatataaaaatgaaaatttatcatcacAAAGGAAATCAAGAAAAAAACGtgaatcaaaaaaatcaaaaaaaaatgaacaaaaaattaaaaaagaaattattaaaattgaagatgatgaagaaaatattaataataataaaaataatgatgaaaatgaaattattaataatataaaatcaccagaacaaattaatgataatagACATTTAGTTGAATCAACAACAAGTTGTGGAGGTGTTGGCGGTGGTGGTTCAGTTGAAATAACTGATATtggtgaaatattttcatttggtgATATTTTACCAGAATTAAAAGGTTGCTCATTAGCATTAGTTTCAAGTATTGatgataatcaaaatattgaaaaagttacacatgaaatttatattgtttgtaaAAAAACTGGTAGTTTAAGTAATAAACCATTAGATTTACCTAAGGATACAATTCATTGTATATTATTAGCAATGGGAAAAATTGAAGATACTTGA
- Protein Sequence
- MSGRRPRVKAIANIGVKRKIKEEIVDKPDVEIKSKEEPPNNNKIIKAEILPVTSDIPIPTTTKTSSAGEEPKNIPSIDNSDENLKSSLSDLQQIRPRQRIKATPCFDVRRNSIHGPNDEQQQIENFSGQMKEPKLPPPSAQNLFNSNRSPIANRTRTESVSSITQQQNVPTTNTTTLNTSVPPDHNHQHQQYFHNNYPPSREHIPPRHRKISTMEDAQRLSAARKEFNSKYSRKTPEKSVLKMFEFIYYNPSSNPMKFDEKCQASSNKLLNNELPSTAKLENEKNLETIESSNIQDDGLTDEPKNNETGTTPSVLPVPQLKLGPNGEIILDEKSLLIETTAEKQIRSNLAASKNFIYLDEYSGNNGFYSRQKRTKDWSPEETIKFYRCLHTVGTDFSLMLALFPNRTRRDLKLKFKKEEKNNGNLINKAILYPKAFDIEELKSEFQREEELIEEKRKQWKEIQEQQQQQDHQNNLDNNKSSSNSKAGRVLTKGDLAYKNENLSSQRKSRKKRESKKSKKNEQKIKKEIIKIEDDEENINNNKNNDENEIINNIKSPEQINDNRHLVESTTSCGGVGGGGSVEITDIGEIFSFGDILPELKGCSLALVSSIDDNQNIEKVTHEIYIVCKKTGSLSNKPLDLPKDTIHCILLAMGKIEDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -