Rlae020544.1
Basic Information
- Insect
- Rhamphomyia laevipes
- Gene Symbol
- DNAJC1
- Assembly
- GCA_963920725.1
- Location
- OY987256.1:16390480-16394285[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.8 1.2e+04 -2.5 0.0 4 19 25 39 23 64 0.64 2 3 3e-06 0.0095 17.1 0.0 2 38 304 343 303 345 0.90 3 3 3.3e-09 1.1e-05 26.5 0.5 2 44 387 434 386 436 0.90
Sequence Information
- Coding Sequence
- ATGTTTAAAtccaatttgaaatattatttcactGTTctgatttttataaactttttcattGCTGCCAAATCATGGGACAGCGATGAATTAGAAATTTTCGACTTAGTTGAAGAagtcaatgaaaatttttacaaattaatgggCCTTTCTGAGGATGCAAGCATGGTAGACGTTAAACGTGCTTTTAGGAATTTATCCATAATATTGCATCCCGATAAAAGTGATGCTGAAGATGCCAacattaaatttcgaaatttagtTTCAGTATACGACGTGCTGAAGGATAAGTCTAAACGTGAAAAATATGACAAGGTTCTACGGGAAGGTCTACCGAATTGGAAATCTGCTTTGTATTATTATCGAAGAGTAAAGAAAATGGGATTAACGGAAGGCTCTTTGATAATATTTGTGATAATTAGTATaggacaatatttttttgcttgGGCCGCATACTTGGAGAGGAAATATACTGCCGAACAAATAATTGGATCTAAATTGAAGAaactacaaaaaagaaataaatcaaatatagatATTGATAGTATATTAGGCGAAATTCCAACACCCAGTatattgaatacaTTACCATTTCAAATACCAAAAGTTATATGgtattttccatatattatgAAGGATATATTAAAAACAGCCTACGAATATAAACaagtagaaaatgaaaaaaaaaaaatGATAGCTGAGGAAATTAGTGAGAGGCGATTATTAGAGGAAGAACTCATAAAAGAGCGTGAAGCGAAAAAAGAAATCCGAgaaaaaattcgaaaaagaaAGAATGCAACTAATGTTCCAGATAAAACTGATGAGGACCTTATAGGATATTCGCAATTGACAAATACATTGTCGGATGAAACTATTTTATCAACTGATAATTCCAAGGGACAACTGAGTGGAGGTGTATGGACAGATGATGATTTTGCTGAACTTGTGCACTTAGTTAAGAAATATCCTGGCGGAACACTAAACAGATGGGAGATAATCTCTCAAAATATGAATCGAAGTGTATCTGAAGTTACATATATGTCTGCAAAATTAAAAGATGCTTCATTTAAAGTTAATGCTTTTAAAGCAGATTATCCAAAACAAACCACATcagaaactaaaataaataataatcaaaaagaaaatattctagTTCTACAGAAAAATTGGTCGCAGGAACAACAACGCGCTCTTGAGATTGctataacaaaatatagaaaaggtTCAAACCTAGATAGATGGCAAAAAATAGCTAATAACGTTCCAGGAAAAAGCAAAGAAGAATGTCTACAACGATATAAATACTTAGTAgaacttataaaattacaaaaatgtaaagaaatttcccaaaatgaaaatattgaaatgaacaCAGACAATCCAAGTctaatacaacaaaataatctcGATACCGAAAGTCAAAATGAGAAATTAGAAAGTAAAAATGAGAAGTTAGAAGAAATTTCATGTAATAGCAGATCTGGTGGAAAACCGAAAAATAAGAGAAGAGAAAATAAAAAGCAATTTACTATCTCCAGCGAGGACGATTCTACCGATAATGAAAGTCCcgattgtttatattaa
- Protein Sequence
- MFKSNLKYYFTVLIFINFFIAAKSWDSDELEIFDLVEEVNENFYKLMGLSEDASMVDVKRAFRNLSIILHPDKSDAEDANIKFRNLVSVYDVLKDKSKREKYDKVLREGLPNWKSALYYYRRVKKMGLTEGSLIIFVIISIGQYFFAWAAYLERKYTAEQIIGSKLKKLQKRNKSNIDIDSILGEIPTPSILNTLPFQIPKVIWYFPYIMKDILKTAYEYKQVENEKKKMIAEEISERRLLEEELIKEREAKKEIREKIRKRKNATNVPDKTDEDLIGYSQLTNTLSDETILSTDNSKGQLSGGVWTDDDFAELVHLVKKYPGGTLNRWEIISQNMNRSVSEVTYMSAKLKDASFKVNAFKADYPKQTTSETKINNNQKENILVLQKNWSQEQQRALEIAITKYRKGSNLDRWQKIANNVPGKSKEECLQRYKYLVELIKLQKCKEISQNENIEMNTDNPSLIQQNNLDTESQNEKLESKNEKLEEISCNSRSGGKPKNKRRENKKQFTISSEDDSTDNESPDCLY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -