Basic Information

Insect: Rhamphomyia laevipes
Gene Symbol: ct
Assembly: GCA_963920725.1
Location: OY987256.1:3401454-3417669[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.6e-27 7.1e-23 81.5 0.0 3 71 734 803 732 809 0.94

2 3 7.7e-32 9.8e-28 97.0 0.0 3 77 1156 1231 1154 1233 0.96

3 3 2.2e-30 2.8e-26 92.4 0.0 3 76 1369 1443 1367 1446 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.6e-27	7.1e-23	81.5	3	71	734	803	732	809	0.94
2	3	7.7e-32	9.8e-28	97.0	3	77	1156	1231	1154	1233	0.96
3	3	2.2e-30	2.8e-26	92.4	3	76	1369	1443	1367	1446	0.95

Sequence Information

Coding Sequence: ATGCAGCCAACTCTACCACAACAAACCGGTGGAATAGCCGATATGGATTTGACGGCTGTTCAATCTATGGATTGGCTATTCAAAAAAGAACGTATCTATTTATTAGCACAATTTTGGCAACAGAGAGCAACATTGGCGGAAAAAGAAGTGAACACATTAAAAGAACAATTATCATCAACTTGTACAGATCTTACAACACAAACTTCATCACAAATCTCAACACTATCACCGACATCAACAACAGCTTCACCAATAAATTGTCAAGAAATATCGATTACgaataattctgataaaaattttaaattatcatcacCAACAAAACTTATAAACTCATCGTCAGATATTAGTATTAATATACCATCACCGCCACCGTCCCAAAATCTTATTCATCAGCAATCAAATCAGCCACAATATCAATTACAAAACGGTGGTTTACTGACTGAAGCACCATCGCCATCACCTCCGTTATCAGATAGTGGCAATATTACACCTGCGTCCAgtacaaaaaattctataataaatagttattgTAATTCTAGTAATCTAAgagttaataaacaaataatttcattaaataataataataataataataaaatggcgGATACCAATGACAGAAACGAttcatgtaatttaaaaacagtTACAGCTGATATGAAAAGATTGGATTTTTTACAAGTTTGTCAAActgtagataaaaaaaatagtactgGAGATAGAACAAAAGAATTATCATCACATTCcccaaaattaaatcaattggaTGAAATTGATGAAGATACcgaatgtaatataaatttaaatacttgtACAAGTGAaaacagcaataataataataataataataataatttaattaatattcaaaataataataataataataataatagtaataatagtaatagcaCAAGAAGCCTGTCAGAAGAATTAGCTGCCAAAGATAAAGAAcTAAAAAAACTTATTGATGAGGTAAGTCGCTTACAAACCCTCCATGAAcgaaatattgaagaaattcaaaaacttaaaGAAAATCTCAATGGAAAAATTGAGgttataacaaatttacaatCTCAATTGAAAGTTACTACAAATGACGATAGtgaatcaaaattatcaaaaccaACCATAAAAGAAGAAAGAGATGAAATTAGTGAAATTGGCAGTCCACTACCCACATCAGTAGTAGCCGTTGATGATGATCCAATTCAAGaagttttattagaaaatactaAAGTTTTAGGAGCTGTGCAGCATAAAGATAAAGCAGATATTTATAATTCTGATgAAACATCTGAATGCACTGATCTAACTAAAATTCATGCACAAAATTCAAAAGACGATgaggaattaaaaaataaaattaatgtatcaTCCACTGAACAAACCAAAGATTCTAGTAATTTATCTTCTGTACCtgataattttcataatgtTGAACAATTTGGTACAATTTTGGGTGaggaactaataaaaaaatattggccTCGTAATTTTGAAATACCACCACTACCCCATTCTAACAATTCGTTATCTATATTaccaaatgaaaatatacaacaTAATACACTCTTATCATTAAAACCAATTATTGATGATGGTGGCCAAATACAAGGTACACCATTATCAGATTTAGCAACAACAGCAAATAAAACGCCAGTATTGTcttcatatcaaaatattataccaaCAACATCAACATTAGAACCATCTTCTACAACTTTATTAAGTCAATTGGttaattcaacattttcaaattctttacgAACAGATAATTCATGTATTTCTTCcacgaataataataataataattcacataATCATTTGCATCAAGACATGGACAAAAGTAGTGGTCGTAATTCAACTACGAGTACACCAAATTTACATGATGGACGTCATTCAACAGATGATCATATTGGTACCGGTGGAATATCAAGCGGAATATTAAATCCAATATCATTAAACAAGAATAATTGTAATGAAGATAATAATCTTGGATCACTTGGACATATTCCTGGTAATTTTTTACCCGGTATACCATTTCAGTTTCAAGATCGAAATCATTTTCGATTTTCTGATGATATTCAAATGAGCGGATCAATGGCTGGCAGGCTTGGTGAATCATTAATACCAAAAGGTGATCCAATGGAAGCAAAATTACAAGAAATGTTAAGATATAATATGGATAAATATGCTAATCAAAATTTAGACACATTACATATATCACGACGGGTTCGTGAATTATTATCAGTACATAATATTGGTCAGCGATTGTTTGCTAAATACGTACTTGGTCTATCGCAGGGTACAGTTTCTGAGCTTTTATCAAAGCCAAAACCTTGGGATAAGCTTACAGAAAAAGGTCGTGATAGTTATCGAAAAATGCATGCGTGGGCATGCGATGATACAGCTGTGTTGTTACTAAAGTCGTTAATACCAAAAAAAGGTTCAGATCCTGGTATGCCACAATATTCTCGATCAGATGATTCCATGTCTGATGATAGAATTGCCCATATTTTATCTGAAGCTTCTCAAATGATGAAAAATCCAACATCTTTAAATACGAATATACATCATCAACCGCAACACATACATCACCAATTTCACCAACAACAATCGTTGATGGAACTTGGAGGCGAACGAGACGATTTAAATAGTAATGAGGATTCTAAATCACCAATTCATAGTAGATGTCAATCGCCAGCTTTTAAAGAAAATCAGCCAAGACAACGTAAAAGTGATGAAATATCCCAGgataaaataaccaaaatatatcAGGAAGAACTCGCTAAAATTATGTCAAGATCACAAAGAGAATCATTTCCAAGttttctttttccacaattttttaGTGGTGGTGCGCCACTAAATCCCAATATACCACAGATGCCAGATGATAATATTCGTGTAGCAATGGAAGCGTATCATCGTGAATTGTCCAAGCTACAACAAACAGGTGGAACTATACCAAATTTTCCTAATCTTTCAGGATTATTAGCCCTGCAGCATCAAGCTACAGCTACAATTAATGGATCAGCGCAGGATTTGtcaatttcaaaagaaaaaggATTTAAGCAGACACAAGAACAATATAATGGCCAAATAAACTGTCCCAGTGAACAATCTGATCAAAATACCAAAGATTCAGTGACCAGCGAAGATCCGCGACATTCTAGTGCATTTAGTTTAGTTCGACCAAAGCAAGAACCTGGTAGTTATCCAAACAATTCATCTGCAAGTGTTGGTACATCATCAGCTGCTGCAAGTCCACTGGGTAATTTAATTCTTCCTCCAGCAATGACACCTAATGAAGATTTCTCAAGTGCAGCTAGCCCATTACAAAGGATGGCTTCtattacaaattctttaataaCTCAACCACCTGTTACGCCTCATCATTCACAACCTCAAAGGCCAATGAAAGCTGTTTTACCTCCCATAACTCAACAACAATTCGATatgtttaacaatttaaatactgAAGATATTGTGAGACGCGTGAAAGAAGCTCTTTCTCAATATTCAATAAGCCAAAGATTATTTGGAGAATCTGTATTAGGACTTTCTCAAGGATCTGTTTCCGATTTATTAGCCAGACCGAAACCATGGCATATGTTAACACAAAAAGGTAGAGAACCATTTATtagaatgaaaatgtttttggaAGATGATAATGCTGTACATAAATTAGTTGCTAGCCAATATAAAATAGCACCCGAAAAATTAATGCGTACAGGTAATTATAGCGGTAGTCCTCAAATACCGACTGGCTTAACCAATAAAATGGGAAATATGGCTAATATTGCTAATATGGCTAATTTGCCAatgcaaaaaattatgaatgagCTAAAAATGCAAGAAAATACCCCTCAGCATATTATGCAACAAATGCAAGCATCTGTATTGGCTCATATTCCACCATCACAGCATCAAGGCATGCTATTAACCCCACCTGGAATGCCACCCCACCATGCAATAAGTTTAACAAATTCCACTGAAAAAAAACCAATGGCGTTACCAGTTCAATCAACGCAACAAGCCAATGCAATGCGTGGATTGCATCAACATATGTCACCAACTGTATATGAAATGGCTGCGCTAACTCAAGATCTAGATAcacaaataataacaacaaaaatcaaaGAAGCATTACTTGCAAATAATATAGGACAGAAAATTTTTGGTGAAGCTGTTCTTGGTTTGTCACAAGGTTCAGTTTCTGAATTACTCTCAAAACCAAAGCCATGGCATATGCTTAGTATAAAAGGACGTGAACCTTTTATAAGAATGCAATTATGGCTATCAGATGGTAATAATGTTGAACGGCTTCAACTATTGAAAAATGAGCGGCGCGAAGCTAGTAAAAGAAGACGTTCCACAGGACCAGGTGGTAATCAAGACAATAGTTCTGATACAAGTAGCAATgatacaaatgatttttatacaaatagcCCAGGACCAGGATCCGTTGGCTCATCTGGTGCTCCACCTAATAAAAAACAACGTGTACTATTTTCCGAAGAACAAAAAGAAGCATTGCGTCTTGCATTTGCTCTTGATCCATATCCTAATGTAGCTACAATAGAATTTTTAGCAAATGAATTGAACCTAGCTACTAGAACAATTACAAATTGGTTCCATAATCATAGAATGCGTCTAAAACAACAAGTTCCTCATGGCGCACCAATGGAACCAATGCCGTCACGTGAAAATCCACCAGCTACACCATTTGATCCCATCCAAttcagaatattattaaatcaacgATTAGTGGAATTACAAAAAGATAGAATGGGAATTAGTGGTATTCCAATTCCGTATCCATCATATTTTGCCGCAAATCCAAATCTAGCAGCTTTAATAGGTCGCGGTCTATTGCCAACAAATGAAAGCGAATTGCAAGCACTAAATGCTGCATTCAGAGAACAAATGAACGGACTAGATCTATCAATGGGCGGTGGTTCTGTGAAACGAGAAAGAGACGATGAATTTGATGATGATGCTGATgctgataatgataatgatctATCTGATTCAGAATCAGTTGATGGCGAAACAAAATCAGATAATCAAAAAGATGATTCATTTATGTCTATGTCACATGGATTACAATCAAGAACATCACGTAGAAAACCAGCAGCACCACAATGGGTGAATCCAGATTGGCAAGGTGTAGGTGGTGGTAGTGTTCTTCCAGttgatttagttaaaaatttaaataataaaactgaaaatgaaGTAATTATAAATGGTGTTTGTGTAatgcaacagcaacaacaagcTGATGATTATAGTAGAAAATCTAGTGTTGAACCTTCTTTACAAACCGATTCAAATACAATAGAATTAAAAGATAATAGTGATATATTAgacaatgataataatgaacTGAAAAATACAGAGTGTATtggttcaataaaaaataatgatattacaaTAACAACAGATTTAACGAATTCATCACTTAACATTTTAGATGATATTAAAATAGATAATACAGATAATAATAGTGaagaatttaatagaaataataaaaaagaattattaatacattattaa
Protein Sequence: MQPTLPQQTGGIADMDLTAVQSMDWLFKKERIYLLAQFWQQRATLAEKEVNTLKEQLSSTCTDLTTQTSSQISTLSPTSTTASPINCQEISITNNSDKNFKLSSPTKLINSSSDISINIPSPPPSQNLIHQQSNQPQYQLQNGGLLTEAPSPSPPLSDSGNITPASSTKNSIINSYCNSSNLRVNKQIISLNNNNNNNKMADTNDRNDSCNLKTVTADMKRLDFLQVCQTVDKKNSTGDRTKELSSHSPKLNQLDEIDEDTECNINLNTCTSENSNNNNNNNNNLINIQNNNNNNNNSNNSNSTRSLSEELAAKDKELKKLIDEVSRLQTLHERNIEEIQKLKENLNGKIEVITNLQSQLKVTTNDDSESKLSKPTIKEERDEISEIGSPLPTSVVAVDDDPIQEVLLENTKVLGAVQHKDKADIYNSDETSECTDLTKIHAQNSKDDEELKNKINVSSTEQTKDSSNLSSVPDNFHNVEQFGTILGEELIKKYWPRNFEIPPLPHSNNSLSILPNENIQHNTLLSLKPIIDDGGQIQGTPLSDLATTANKTPVLSSYQNIIPTTSTLEPSSTTLLSQLVNSTFSNSLRTDNSCISSTNNNNNNSHNHLHQDMDKSSGRNSTTSTPNLHDGRHSTDDHIGTGGISSGILNPISLNKNNCNEDNNLGSLGHIPGNFLPGIPFQFQDRNHFRFSDDIQMSGSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDTAVLLLKSLIPKKGSDPGMPQYSRSDDSMSDDRIAHILSEASQMMKNPTSLNTNIHHQPQHIHHQFHQQQSLMELGGERDDLNSNEDSKSPIHSRCQSPAFKENQPRQRKSDEISQDKITKIYQEELAKIMSRSQRESFPSFLFPQFFSGGAPLNPNIPQMPDDNIRVAMEAYHRELSKLQQTGGTIPNFPNLSGLLALQHQATATINGSAQDLSISKEKGFKQTQEQYNGQINCPSEQSDQNTKDSVTSEDPRHSSAFSLVRPKQEPGSYPNNSSASVGTSSAAASPLGNLILPPAMTPNEDFSSAASPLQRMASITNSLITQPPVTPHHSQPQRPMKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGSPQIPTGLTNKMGNMANIANMANLPMQKIMNELKMQENTPQHIMQQMQASVLAHIPPSQHQGMLLTPPGMPPHHAISLTNSTEKKPMALPVQSTQQANAMRGLHQHMSPTVYEMAALTQDLDTQIITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDGNNVERLQLLKNERREASKRRRSTGPGGNQDNSSDTSSNDTNDFYTNSPGPGSVGSSGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLANELNLATRTITNWFHNHRMRLKQQVPHGAPMEPMPSRENPPATPFDPIQFRILLNQRLVELQKDRMGISGIPIPYPSYFAANPNLAALIGRGLLPTNESELQALNAAFREQMNGLDLSMGGGSVKRERDDEFDDDADADNDNDLSDSESVDGETKSDNQKDDSFMSMSHGLQSRTSRRKPAAPQWVNPDWQGVGGGSVLPVDLVKNLNNKTENEVIINGVCVMQQQQQADDYSRKSSVEPSLQTDSNTIELKDNSDILDNDNNELKNTECIGSIKNNDITITTDLTNSSLNILDDIKIDNTDNNSEEFNRNNKKELLIHY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01297268;
90% Identity: iTF_01297268;
80% Identity: iTF_01297268;