Rlae031805.2
Basic Information
- Insect
- Rhamphomyia laevipes
- Gene Symbol
- kn
- Assembly
- GCA_963920725.1
- Location
- OY987259.1:9417955-9422704[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-115 2.6e-111 373.8 0.0 205 385 1 210 1 213 0.99 2 2 4.7e-12 3.6e-08 33.2 13.5 422 530 213 323 210 335 0.82
Sequence Information
- Coding Sequence
- ATGAGAAGATTTCaggtTGTGATAGCAACACAAGTCAGTGTCGAAGGACCTCTAATGGCAATATCTGATAATATGTTTgtacataataattcaaaacatGGCCGACGAGCAAAACGTTTGGATGCTACGGAAGGTACAGGAAATTCTCCCCTGGCCATTACGGGTCATCCCCTTGCGCCTGACAGTACCTACGACGGACTCTATCCACCATTACCAGTAGCAACACCATGTATTAAAGCGATATCACCAAATGAAGGTTGGACAACTGGTGGTGCAACTGTTATTATTGTTGGTGATAATTTCTTTGATGGCCTTCAAGTTGTATTTGGTACAATGTTGGTATGGAGTGAATTAATAACATCACATGCAATACGTGTTCAAACACCACCACGTCATATACCAGGTGATGTTGAAGTAACATTATCATATAAaagtaaacaattttgtaaaggTGCACCTGGTAGATTTCGCTATGTTTtagcATTAAATGAACCAACAATAGATTATGGTTTTCAAAGATTACAGAAACTAATACCACGACATCCTGGTGATCcggaaaaattacaaaaagaaattatactAAAGAGAGCAGCTGATTTAGTTGAAGCATTATATTCAATGCCAAgatcGCCCGGCGGTACAACTGGCTTTAATTCATATGCTGGTCAATTGGCAGTTAGTGTACAAGATGGTACAGGTCAATGGACCGAAGATGAATACCAAAGAGCACAAAGTAGTAGTGTTAGTCCACGTGGAGGTTATTGTAGTAATGCATCAACACCACATTCATCCGGTGGATCATATGGTACTACAGCAAATGGTTATGGACCAGCTCCAAATATGGGTACATTGTCATCATCACCGGGCAATGTATTTAATTCAACGTCGACCAGTGCTTTTTCGCCATTAATATCGACAACAACAGCTGCATGGCATCAAGCATTAGTACCATCAACTGCATCCTCACATCAACATTATCATggtcatcattatcatcagtcGTCATGGCATAATCCACAGGCTGCTGCAGTTACGGCGACTgtcgtttaa
- Protein Sequence
- MRRFQVVIATQVSVEGPLMAISDNMFVHNNSKHGRRAKRLDATEGTGNSPLAITGHPLAPDSTYDGLYPPLPVATPCIKAISPNEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGDVEVTLSYKSKQFCKGAPGRFRYVLALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGTTGFNSYAGQLAVSVQDGTGQWTEDEYQRAQSSSVSPRGGYCSNASTPHSSGGSYGTTANGYGPAPNMGTLSSSPGNVFNSTSTSAFSPLISTTTAAWHQALVPSTASSHQHYHGHHYHQSSWHNPQAAAVTATVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01116233;
- 90% Identity
- iTF_00642950;
- 80% Identity
- -