Rlae033999.1
Basic Information
- Insect
- Rhamphomyia laevipes
- Gene Symbol
- Arid2
- Assembly
- GCA_963920725.1
- Location
- OY987259.1:50944826-50953835[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-26 1e-22 81.3 0.1 2 89 44 129 43 129 0.95
Sequence Information
- Coding Sequence
- atgacaaCAACTGAATTAAAAGAACCTCCAACACCGGCTACGACACAAAATGAAGATAGTTCGACTAGCAAAAGTGTTAATTTGAAGAAAGTTTCACGTGTAGAAAATAATGTACAACAAGATCGTGACAAAGAATCTTTTTACAAGGATTTACAAAACTTCCATGAAAATAGAAAtacaCCAATTACACGCTTTCCAAAAATCAATGGCAAAGAAgttgatttacataaattatactcAGAAGTAATAAGTCGTGGTGGTTGGCTTAAAGTAAATATACGTAATGAATGGGAAGATATGATATCTGTATTAGGTTTTTCACAAAAATGTGTAAATGCATCGGTtgctataaaacaaatatatgctagatttttagataaatatgagaaattaaattttcttggtGAAGATCCAGATCgaaatgatgaaattgatgatgatgGACGTCATAAAAAATGGTCAACTAAAAATTGTATGCAAACAATTCCAATGACATATAATTACAATCAACATAATGTTACTGAACAAACTAGAATTCAACATAAACTATCAactgatttatataaaagttctGAATATGAGAAACTTTTATTGTCATTAATGTCACCATTACCAAATGAACAAGATTTTGCTATAAATGTATGTACATTAATGGCAAATGAAAGTAAACatacattaaaaatagaaaattgtccAAAATTATTAGATTGTTTGTTGGGACATGCAGGAGTTTATTGTCAtcTAACTATGCGTAATCTATTCGAagatttttacattaatattcgACGACATTCTTTACAATCTTTTTGGAATGATACACTTCAaaataatacacaaattttGGAATTATCTTATGACGATTGTTTTCAATCATCTGAGgaaccaaaaaatattgaagaaatacGAAGACGTCGTTTAAATGGtccaaaacaacaacaaaaacaatctATTGAAGATAGTGACAATGATTTATTTGCTTCCGATGATAcgataattgattttaataaattggattttttagGATTAGGTCGTAGATTAGGTACTCATGAATATATTGGCCAAAGAATACAACAAATTGCTTCCATTATtcgaaatttaagttttttcgaagaaaatattttagttttagcgAAAAATCGTACATTTATTCGATTTTTAGTAATGTGTTCGAATATTAGATGGGGTAATATACATCATATGGCATTAGATGTATGTGGTAATATTGCAacagaaattcaattattagatCCATCAACAGATGAATTGACACGTTGTTTATTGGCAACAATTTGTGATGGGTTGGAGGGTCAGGACCGTGGTGTAATAATAACATCATtagaaattctaaataaattaagtcAAAAAGATACACATAATGATTACTTGCATAAATGTTTGgatcagaaaatttataatcaaatatgtttatatttatcattaaatgatATTATGTTATTGTTATATACATTGGAATGTATTTATTCATTAAGTTCATTGGGACCACGATCATGTAATTCATTGATACAAGTACGTGGTATTATTGATAcattaatatcattaataactGTTGAAGCACAATCATATGGACCAGATGGTTGTATTTTAATGCGGGTTGTTGAAACTGTACCAGGTAATATGTTACCAATGGTTGCAAAAAATATTGCCAATTTACAAAATGTTGCTATGCATGGTCAAGTTAATATgcaacaattacaacaacaacaacatcaacaaattcaaaatcaaggaACAATTAATCAACAAACTCAATCTCCTGCTATTCGTTTACCAGCACCACAAACAGGTACGACACCGCAAACAACGACTGCTGCAGTCATCGTTCCAACAATTCAAACTACCAATCAGCCTAATATTCAACAGAATAAATCTATACAAAGTTTACAAGAAAATGAGCAATTTGCAATATCATGGTTAACAGCAACATTTGAAATGGCACCATCGGCAGCATCACGTGTTGAACaacaagaattatataaaatgtatttatcggctataaaaaaaactggacGTTGTGGTTCTGTAACACAATCACATTTTCCTCGTATTGTTCGATCAATATTTGGTACAAATATTGGACCAACAATGTTAAAAGTAATAGATACAAATGGTGTCGAATCAAATggtttcttttatatttgtgtacgtGTTAGAGCAAATCCATTACCATTAAAAGGTTCAATAACAGTACAACAGCCACCAGTAATAGTTAAAACACCAATTAAAACACAacctcaacaacaacaacaacaattatcgaaacaacagcaacaaaatatTAGTAGTGAATTGGTAAACAAACAAATTGGAAAATCTGAGGTGGgttcaaaacaacaacaacaaactaaaattattaacacaaaACAAATAATACCAACAACTGTATCATCATTTCAATCCAAATTATCAACTACTTCTGTTATTGTATCACAaggacaacaacaacaacaacaaaatgatcaaaataaaattcaaattcaagaaATAGTTTCTAATCCAATTAACACAAttccaattaataataataataacaataatatccaATCAAATAGACcacaacaattacaacaaaatataattttacctaacaataacagtaataataatagtgtagCACTAACAAGTGGAGCATTAACAAAAACTCCTGTTATCAAGAATGtagttCTACAACATCAGCAACAACAGAAAGGATCAAATATAATCGTGACACAACAAGGACAAATTAGCGGACAAGCAGGTGTTAAAACATCTATTGTGCAAACATCAATAGCAACGACGGCAACAACAGGATCAATTTCTGGACAAATTGGAATTGGGGGACAACAGAATCCAACATCATTAATAAAAAGTCTTTTGGCTAATAAGcttGCACAACGCCAGAATTTggcaaaacaaaaagaaatatctgcacaacaacaacaaatgatCCAaatacatcaacaacaacagcagcagcaacaagTAGTCTCAACACCAATTAAATTAGCCACAACAACAATAAGTGCTTTAGTAAATAATCCAATTATTCAAACAACACCTGTTAAAGTTGGTCAAACAACTATTAAACCAATTAATCCAAatacaattgataaaaaaacaacaataacaacatctATTTTACCAAGTGAAAGTATGGATACATCTAATTGGGAACCTGTACCACCATTAGCACCATTAAGTGGTAATGCATTACGTTCAACAATTATGATTAATAGTAGTTTAGGTATAAATAGTGAAGATTCATCAAATTCAACTGGTAATAATTCAATTGCATCGTCAAGTGCTATTAGTTCATCACAAATACCAATAACAACAGATGATGGTGAAAATTCAGTTATTAGTTTTGAAGGTCTCTTAAtaccaaaatcaattaaatctaaATCATCAGCATCATCAATAATTGATGATGAAAATTCGAATAATTCATTGCATAGTCGATCTAATATTAATTCACAAGTAATAAATGCTAATCAAATGTTAGTtgatttattagataaaaaatcacCAGATCCACCATTACATGGTATTAAACGTAAATTAGGTGatgataataatacaattattgttAGTTGTggtaatgacaaaaaaaaattagctattAGTGATGGTTCATCAAAAGTAATACCATCAAAAAATGCAGCAAATTTATATGCTGAAATGGCTGCATCAATTTTGGAAGATGAAGATTTAGAAGAAACATCACAAACATCAACTAGCCAACAATTACaacacacaacaacaacaattcaaCAGAAAATTgataatcaacaacaaaaacaacaaattatatcAATGCCATTACAACGTCAAATCATAATGACACCAAATAATcctcatcatcaacaacaacaacaaatgatTATACAACAAAATCCAACAGTTTCTGGTAATATTGTAGCATCAACAAATACCCATCATCAAGCAACTGCAACAATAAAAACAGATTCTGGTTTACAAACAATACcggtaattttacaaaaacaaattggTCCAAATGGTCAGCAAATGATTCAACCAGTTATACAACATCAAACAatatcacaacaacaacaaccaacaCAAACACAATATGTTTTAGCTACAAATCCTCAAGGTCAAACATATTTAGTTGCACAACAAACACCAACTCAATCACATTCATCTCaccaacaacagcaacagccACAAACTTTAGTTTTAACACAAACTGGCGGACAACAACAAGGTGGTACaccaacaaaaacaattattattttacaacaacaagGTGGTCCACCACAAGCTGTTGcccaacaacaaataattagtGCACCCGGTCAACCACAAAAAATGATTATGACAACACCACAAGGCCAACAAATGATTGTAACAACACAAATTCCACGACCAATACAACATcatcaaataattatgaattccGGTACAAGTGTTCTACAAACTACATCTGGCGGTAACAATGGTAATGGTAATTTGCAACATCATCAAAATGTTGTGATTACACAATCGGGACAAGTTTTAAGTCATCATTCACAGcaacaaattcaaaaacaaattcaaatacatCAAcagaaccaacaacaacaacaacagcagcaacaaatGCAAATTCAACAAACTATTACCCCACAACAATTAAGTgcttttcaacaacaacaagctTCCATATTATCTCAATTACCACAAATACCggcaacaataaaattacatagtCATCAACCAACTGGTTTACCATCGGTTATTCAGCAAACACAAACTACTCAAACGCAAACAATTAAAATGATACCAAAACAACAAAACCAACCACCAATAGTATCAATAATTGCTCAAACTCCATCACAACCACCTGTTGCTCACCATcaacaaatacaaattcaaggacaaatttcaaaacaaattacaaaagcAACTACAATGGTTCCagaaagaaaacaaattattgttagtggaaatgaaataattaagcAACAAACTCAACAGCAACAGCAAATTCAACAAAAACAGATACAAATGAATCctcaacaaaaacaacaaaaaattatacaagttCAGCAGCAAATACAACAACCacaacaacaaattcaacaGCAGCAAattcaacatcaacaacaactgCCACAaacccaacaacaacaaactcaacaaaatcaaattcaGCAGCAACAAACTCAACAGTCACTATCAAAAACGGTAATACAGCAACAAGTCCAACAACAATTAATTCAACAGCCTCAAagtcaaataattaataacccAACCCAACAACAAAAACTAGTCGTCACCACTTCACGAACTCCAACaccaacaaatattttacaaaatccaGCTGGAACACCGACTCCTCCTCCACAACAATCTGGTATAATAGTTGGTCGCCCTCTCTCAACACCAACACCACCAATTCCAGCGCTAAATCAAACTCCTCCACCACCAATTAGTCCAGCTCTACCAAAACCAAAAACGGATGAAGAATTAATTGAACTGAATTGGGTTTGGATATGCGATTGGCGAGGTTGTCCTCGacgaaaatttaaatctttacaaGAAGTATACCGACATGCATGTCAAGTACATTGTCCTGATAATTTAGATCCAGGTGCTGAGATATTTTGCCAATGGGGTCCGGGACAATCACTTTGTGATAACATACCAAGAAAACGATTCTCTTTAATGACACATTTACTAGATCGTCATTGTACCATTGAgaGTTTGAAAGCTGCAGTACAAAGACGTTTAGTGTCCGGATTACCAGCAACTCCAGGTCCACATCAGCcagttacaataattaaaaataactcgGAAATTAGAGGAACAACTGCATCTCCAACATTGTCAACATCTTCGTCTAGCTCAGTTCCATCAGCAGCAAGTGCAGCAATGCATGCAATTAAAAGACATACAAATGATTTTCTCAATCCAAAGGAATTAAtgGATGAAAATGAAGGTCCTGTAACTAAAAGTATTCGGCTCACTGCAGCATTGATTTTGAGAAATTTGGTTATGTACACAGCAAATGCAAAAagAAACGTACGCTTTTATGAACCGCATTTAGCTGGTGTCGCCTTAAGTAACGTAGAATCAAGCCGAACTATTTCTCAAATtctttatgaattaaataattaa
- Protein Sequence
- MTTTELKEPPTPATTQNEDSSTSKSVNLKKVSRVENNVQQDRDKESFYKDLQNFHENRNTPITRFPKINGKEVDLHKLYSEVISRGGWLKVNIRNEWEDMISVLGFSQKCVNASVAIKQIYARFLDKYEKLNFLGEDPDRNDEIDDDGRHKKWSTKNCMQTIPMTYNYNQHNVTEQTRIQHKLSTDLYKSSEYEKLLLSLMSPLPNEQDFAINVCTLMANESKHTLKIENCPKLLDCLLGHAGVYCHLTMRNLFEDFYINIRRHSLQSFWNDTLQNNTQILELSYDDCFQSSEEPKNIEEIRRRRLNGPKQQQKQSIEDSDNDLFASDDTIIDFNKLDFLGLGRRLGTHEYIGQRIQQIASIIRNLSFFEENILVLAKNRTFIRFLVMCSNIRWGNIHHMALDVCGNIATEIQLLDPSTDELTRCLLATICDGLEGQDRGVIITSLEILNKLSQKDTHNDYLHKCLDQKIYNQICLYLSLNDIMLLLYTLECIYSLSSLGPRSCNSLIQVRGIIDTLISLITVEAQSYGPDGCILMRVVETVPGNMLPMVAKNIANLQNVAMHGQVNMQQLQQQQHQQIQNQGTINQQTQSPAIRLPAPQTGTTPQTTTAAVIVPTIQTTNQPNIQQNKSIQSLQENEQFAISWLTATFEMAPSAASRVEQQELYKMYLSAIKKTGRCGSVTQSHFPRIVRSIFGTNIGPTMLKVIDTNGVESNGFFYICVRVRANPLPLKGSITVQQPPVIVKTPIKTQPQQQQQQLSKQQQQNISSELVNKQIGKSEVGSKQQQQTKIINTKQIIPTTVSSFQSKLSTTSVIVSQGQQQQQQNDQNKIQIQEIVSNPINTIPINNNNNNNIQSNRPQQLQQNIILPNNNSNNNSVALTSGALTKTPVIKNVVLQHQQQQKGSNIIVTQQGQISGQAGVKTSIVQTSIATTATTGSISGQIGIGGQQNPTSLIKSLLANKLAQRQNLAKQKEISAQQQQMIQIHQQQQQQQQVVSTPIKLATTTISALVNNPIIQTTPVKVGQTTIKPINPNTIDKKTTITTSILPSESMDTSNWEPVPPLAPLSGNALRSTIMINSSLGINSEDSSNSTGNNSIASSSAISSSQIPITTDDGENSVISFEGLLIPKSIKSKSSASSIIDDENSNNSLHSRSNINSQVINANQMLVDLLDKKSPDPPLHGIKRKLGDDNNTIIVSCGNDKKKLAISDGSSKVIPSKNAANLYAEMAASILEDEDLEETSQTSTSQQLQHTTTTIQQKIDNQQQKQQIISMPLQRQIIMTPNNPHHQQQQQMIIQQNPTVSGNIVASTNTHHQATATIKTDSGLQTIPVILQKQIGPNGQQMIQPVIQHQTISQQQQPTQTQYVLATNPQGQTYLVAQQTPTQSHSSHQQQQQPQTLVLTQTGGQQQGGTPTKTIIILQQQGGPPQAVAQQQIISAPGQPQKMIMTTPQGQQMIVTTQIPRPIQHHQIIMNSGTSVLQTTSGGNNGNGNLQHHQNVVITQSGQVLSHHSQQQIQKQIQIHQQNQQQQQQQQQMQIQQTITPQQLSAFQQQQASILSQLPQIPATIKLHSHQPTGLPSVIQQTQTTQTQTIKMIPKQQNQPPIVSIIAQTPSQPPVAHHQQIQIQGQISKQITKATTMVPERKQIIVSGNEIIKQQTQQQQQIQQKQIQMNPQQKQQKIIQVQQQIQQPQQQIQQQQIQHQQQLPQTQQQQTQQNQIQQQQTQQSLSKTVIQQQVQQQLIQQPQSQIINNPTQQQKLVVTTSRTPTPTNILQNPAGTPTPPPQQSGIIVGRPLSTPTPPIPALNQTPPPPISPALPKPKTDEELIELNWVWICDWRGCPRRKFKSLQEVYRHACQVHCPDNLDPGAEIFCQWGPGQSLCDNIPRKRFSLMTHLLDRHCTIESLKAAVQRRLVSGLPATPGPHQPVTIIKNNSEIRGTTASPTLSTSSSSSVPSAASAAMHAIKRHTNDFLNPKELMDENEGPVTKSIRLTAALILRNLVMYTANAKRNVRFYEPHLAGVALSNVESSRTISQILYELNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00642995;
- 90% Identity
- -
- 80% Identity
- -