Rlae032308.1
Basic Information
- Insect
- Rhamphomyia laevipes
- Gene Symbol
- XBP1_1
- Assembly
- GCA_963920725.1
- Location
- OY987259.1:20184218-20185684[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-11 1e-07 32.9 20.0 2 64 52 128 52 129 0.78 2 2 4.3 7.4e+03 -1.9 0.1 19 32 278 291 276 294 0.84
Sequence Information
- Coding Sequence
- aTGAGTGCAATTTTGATTAGTGCCCCGAAATATGTACCAATTTTTCCAAATCCGGATCAAAAAATGGACATGGAGATGCCATCATCACCGTCACCGTCCTGGGATAATGGTACTAATCGGGGTAAAAAACGTCGATTAGATCATTTGACGTGGGAAGAGAAAATACAGAGAAAaaaactaAAGAATCGTGTAGCAGCACAAACATCACGTGATCGTAAAAAAGCTAAAATGGATGAAATGAACATTACAATATCAATAATGGAAGATCGTTTAGAAATCTTACAAAATAAATGTGACAGTTTACAATCTATGAATGAgtcattattattgaaaaatgaaaaacttgatCAACAAGTCGagcaattattacaaaaattatctaaaatggaTAATAGTAATAACAACATAGAGAATTGCAACCCACTACCTACTGTTGATGCCTCCCGTACTACAATGTCTGATGATTTGAGTTCTGATTGGAATGGAATTGAAGTCAATAAAATCGGAACAATATCACAACATGAAGAAACAAAACAAGAACAACAGCAGCACAGTAGCATCTTTATGGAAGATAATAACACTATGCCTTCTTTACAAGACTTGTTCGAAGACCTCGATGCAACAAAACTTGAAGATTTCGCAGAAAGTTTACTTGCCGATATCACAGCAGACTTGGAAAAAAGCATTCGAGAAAGCGACACAATTACTACCGAAAATCCAAGCGAAACAGAGCAACTGTTTGGATCAATGGTGGGGACCACAACAGAGCTCATGGAATCCACAAGCCCTACAACAACCACAACAGACAATTGTtgcttaaaaaatgaattaagtactaataaaaataaacagtatataaataaaaatgaatgccCAAGTAAAATATcaagtaaaagaaaaaatattaaaaatgacagTACAATATCTGATCCAGAAACATTATACGGGACCTATGatgaaaaaacaaattcaataacAATTGTTATGCCCGATGGTAGTTTACCAGTACAAGAATTTGTTGAAGAAATTATTTGTGATGATCAGGATCAATCACAACAATTATCTAATGAGGAAGATGAAAATATAGTTTGTTTAGCAGATAATATTATGAATAGTTCGATATCATTAGATAATAATACAGATTTTGATCcagtaaaagaatttttatctaTACCAAGTCAAATCGATTATTCATCAGCACGGAAAAGTCCATATTCATTACATTCAGATCATGGTTATGTTTCAATTGGTTCACCATATTCAAATCATAgtggtgatgatgatggtgGACAATTTGAAATATGGAATGAATCGTTTTCAGAATTATTtccatcattttaa
- Protein Sequence
- MSAILISAPKYVPIFPNPDQKMDMEMPSSPSPSWDNGTNRGKKRRLDHLTWEEKIQRKKLKNRVAAQTSRDRKKAKMDEMNITISIMEDRLEILQNKCDSLQSMNESLLLKNEKLDQQVEQLLQKLSKMDNSNNNIENCNPLPTVDASRTTMSDDLSSDWNGIEVNKIGTISQHEETKQEQQQHSSIFMEDNNTMPSLQDLFEDLDATKLEDFAESLLADITADLEKSIRESDTITTENPSETEQLFGSMVGTTTELMESTSPTTTTTDNCCLKNELSTNKNKQYINKNECPSKISSKRKNIKNDSTISDPETLYGTYDEKTNSITIVMPDGSLPVQEFVEEIICDDQDQSQQLSNEEDENIVCLADNIMNSSISLDNNTDFDPVKEFLSIPSQIDYSSARKSPYSLHSDHGYVSIGSPYSNHSGDDDGGQFEIWNESFSELFPSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -