Rbic054028.1
Basic Information
- Insect
- Rhamnusium bicolor
- Gene Symbol
- Zmiz1
- Assembly
- GCA_029963845.1
- Location
- JANEYF010004469.1:1306929-1318898[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.13 3.5e+03 -0.1 0.7 4 24 539 559 536 564 0.88 2 2 4.2e-26 1.1e-21 78.4 4.5 1 50 619 668 619 668 0.98
Sequence Information
- Coding Sequence
- ATGCTGGGATATACTTCctatagGGACTGGACGCCAGGGGGCGCAACTGCCCAGCAGCAGTTGTCAGTTGTGACCACCGTGTGGGGAGTTACCACGTCCACACAGTCGGGCCCCCACGGGGGAGGATATACGGGCGGCCCGACTCCTGCAGGCAACCCTAACTACGGAAACGGCCTCACCAAGGTTCAGCCGAGTTCTTATCAGGCAGCATACAGACAAAGCGTTCCTCCGGGTGTGGGCGGTTATGGTGCAGGTAATGTTATGAATGGTGGCGATAACGGTTACGGAAGTGGTAATGCCCTTTCCACTGCGGCGATGGTAGCTGCAGCGACCGCCACTGCGACGGCCACCGCTAGTGTGGTGGCGCTTCAAGATAACGGACAATTCAACCAGCAACAGTATTCCCAAGGATACCAGCAAAGGATGATGCCCATTAATGGAATGAATGGGATGAATCCCATGAATAACATGCAAAACATGAGCATGGGTGGCATGCACAATAATGTTATGGCTAACATGGGTGGCACAATGGGACCCAAAATGGCCTTACAGGGCCCAGGACCAACTTCAAACTCCATGTACCCAAGGAGGATGACCCCTTATCCTTCACCCGCCATGCATATGTCCCAGAAAAGGACCAGTCAACAAAATTACCCTAACTCTTGTCCAACCATGAATCCCAACATGAGTCCTTCCATGAATCCTAACATGAGTCCTACCATGAATCCAAACATGAACCCCAGTATGAACCCCAGTATGAACCCCAGTATGAACCCCAGTATGAATCCCAGTATGAACCCAAGTATAAACCCAAGTATGAATCCTAATATGAATCCAAGTTTGAATCCAAGTATGAATCCTAATTTTAACCCTAACGGCCAATATCCGACTTACGCTACAAGGCAGCCTAGTTTCAATCAGTATCCTACCCAACAGTCACTGGGACCTACTGGCAATTTTGGCCCTGGGCCGGGTAATATGGTTCCTGTCGGGAATCCCAGGCAGTTGAGGCAAGCAACACCGCCTTACACAAACCAAGGACAGTATTTCTCTAATGGTTCCATGAGTCAATTTCCTTCAAACAACTCGGGCCAGTATAACATGAGCACTAGCGCTAATGCGCAATATGTCAACAACACATCAGCCCACCAGTTTCAACAGGATGTTGCAATGAGAAACAACATGAACTACCAACATAGCCCGATCCCGGGTAACCCCACGCCACCTCTCACGCCAGCCAGTAGTATGCCTCCATACATTAGTCCCAATCCTGATGTCAAACCAAACTTCAATGACCTCAAACCCCCATTACCAACACAGAAAGATGACGAGCTTAGATTGACGTTCCCCGTCAGAGATGGAATAATCTTACCACCATTCCGTCTCGAACACAATTTGGCCGTAAGCAACCACGTATTCCagcttaaaccgacagttcacCAGACGCTGATGTGGCGTCAAGACTTAGAGCTGCAGCTCAAATGCTTCCACCATGAAGACAGACAAATGAACACCAATTGGCCTGCTTCAGTGCAAGTTTCTGTAAACGCCACACCGCTCATTATCGATCGAGGCGAAAACAAAACGTCGCATAAACCATTGTACCTTAAGGATGTCTGCCAACCTGGCCGAAATACCATACAAATTACTGTTTCGGCATGTTGTTGTtcgcATCTGTTCGTTCTGCAACTTGTACATAGACCAAGCGTTCGGTCAGTACTGCAAGGCCTACTGAGGAAGCGATTGCTGACAGCAGACCATTGTATAGCGAAAATTAAGAGAAACTTCAGTAACACGGGCTCTGGTCCGAATATGGAACGAGATAGAGACGCTGTGGAGCAAACGGCCCTCAAGGTGTCTCTAAAATGTCCTATCACGTTTAAACGAATCACACTGCCTGCACGGGGACACGAGTGTAAACATATACAATGTTTTGATTTGGAGTCCTACCTGCAACTCAATTGCGAACGGGGGTCGTGGAGGTGTCCTGTTTGCAATAAACCTGCACAGTTAGAAGGCCTAGAGGTTGACCAATACATGTGGGGAATACTTAACACATTAAGCACTTCGGACGTGGAAGAGGTCACTATAGACAGCTCTGCCAATTGGAAGGCGGCAAAAGGCAGTGTATCAGGGATAAAGaTGGAAGATGAAGGTAATGACTCCTGTGGAGCCAAGAGGAACAAGGCGATGTCCCCTGGTAGCATGACTCTTCCCACAATGAACAATTGGGATATGCAAGCGATGTCGCCTTACTTACCTCCAGACATGAACAGTATTGCCAGTGGTTCGATGATGAACGGACCACCGTCCTACAATAATTCCAGAAATAATATGAATGACATGTCTTCGTATTCTGGAAGCAACGAATATTTAAGTGGAAACGGACCACTGTCACATCTAAGTGAATCTGTAAACTCTCTGGATCCACTAAACGCAATGGAGAAGAGCCTGAATGAGCAGATGCCACACACACCGCATACACCTCATACCCCTCATACTCCCCACACACCGGGTGGAACCCCAGGATCGGCACACACGCCGGGTGGCGGGACAGGGCCTCCGAGTGTACCACCACCATCAGATGCCCACAACAACAGTTCCAATTCAAACAGCAGCAGCACGAATAATAGTGGGAATGCTGAAAGTTCTGTTCCTGAAATTCCTTCGGATCTCAATTTCGATCCCGCCGCCGTTATCGATGGCGAAGGGACGGGCCAGGAAGCCCTCAATTTGCTACCCGACAGCGTGGACCCCATGGAATTGCTGTCCTATTTGGACCCTCCCGACCTGAACACGCCTCCCTCGAGTGGTAGCAGCTCAGGACATGCCAACACATCCACAAATGACGATATTCTCGCTCTGTTTGAATAA
- Protein Sequence
- MLGYTSYRDWTPGGATAQQQLSVVTTVWGVTTSTQSGPHGGGYTGGPTPAGNPNYGNGLTKVQPSSYQAAYRQSVPPGVGGYGAGNVMNGGDNGYGSGNALSTAAMVAAATATATATASVVALQDNGQFNQQQYSQGYQQRMMPINGMNGMNPMNNMQNMSMGGMHNNVMANMGGTMGPKMALQGPGPTSNSMYPRRMTPYPSPAMHMSQKRTSQQNYPNSCPTMNPNMSPSMNPNMSPTMNPNMNPSMNPSMNPSMNPSMNPSMNPSINPSMNPNMNPSLNPSMNPNFNPNGQYPTYATRQPSFNQYPTQQSLGPTGNFGPGPGNMVPVGNPRQLRQATPPYTNQGQYFSNGSMSQFPSNNSGQYNMSTSANAQYVNNTSAHQFQQDVAMRNNMNYQHSPIPGNPTPPLTPASSMPPYISPNPDVKPNFNDLKPPLPTQKDDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHQTLMWRQDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLIIDRGENKTSHKPLYLKDVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKRNFSNTGSGPNMERDRDAVEQTALKVSLKCPITFKRITLPARGHECKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLSTSDVEEVTIDSSANWKAAKGSVSGIKMEDEGNDSCGAKRNKAMSPGSMTLPTMNNWDMQAMSPYLPPDMNSIASGSMMNGPPSYNNSRNNMNDMSSYSGSNEYLSGNGPLSHLSESVNSLDPLNAMEKSLNEQMPHTPHTPHTPHTPHTPGGTPGSAHTPGGGTGPPSVPPPSDAHNNSSNSNSSSTNNSGNAESSVPEIPSDLNFDPAAVIDGEGTGQEALNLLPDSVDPMELLSYLDPPDLNTPPSSGSSSGHANTSTNDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01013925;
- 90% Identity
- iTF_00887116;
- 80% Identity
- -