Rbic037042.1
Basic Information
- Insect
- Rhamnusium bicolor
- Gene Symbol
- MYRF
- Assembly
- GCA_029963845.1
- Location
- JANEYF010003051.1:580189-594973[-]
Transcription Factor Domain
- TF Family
- NDT80_PhoG
- Domain
- NDT80_PhoG domain
- PFAM
- PF05224
- TF Group
- Unclassified Structure
- Description
- This family includes the DNA-binding region of NDT80 [2] as well as PhoG and its homologues. The family contains Swiss:Q05534 or VIB-1. VIB-1 is thought to be a regulator of conidiation in Neurospora crassa and shares a region of similarity to PHOG, a possible phosphate nonrepressible acid phosphatase in Aspergillus nidulans. It has been found that vib-1 is not the structural gene for nonrepressible acid phosphatase, but rather may regulate nonrepressible acid phosphatase activity [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-16 1.5e-11 47.0 0.1 2 88 102 177 101 180 0.95 2 3 6.2e-14 4.9e-09 38.8 0.1 130 180 177 228 173 228 0.81 3 3 0.37 2.9e+04 -2.8 0.1 81 131 566 626 543 656 0.58
Sequence Information
- Coding Sequence
- ATGGTgcgttttaaaaaagtgaaagcacttaatttaattaaatataaatattgtgcaTTTTTGCCAGAACACTGTGCTACAAGCCAACTAAGTCCATCGGAACAATTGTCTTCATCCATAGATGAAGAATATGCCTCATCCGAGGCTTGTTTATCAGAATCTCAGTACCAGTGTATTAGGTTTAATGCATTCCAGCAAACGAATTGGCATTTACTGTGTGATCAGAATCTTACAGAATTGCCAATTCCCCATTATAGAGTAGATGCAGACAAAGGTTTCAACTTTTCCAATGCAGATGATGCGTTTGTTTGCCAGAAGAAAAACCATTTTCAGATAACTTGCCATGTACAACTACTCGGTGATGCTCAATTTGTTAAAACTCCAGatggttttcaaaaaatttccagTTTTCACTTGCATTTCTATGGAGTTAAGCATGACTGCCCGACACAAACGATAAGGGTCGAGCAAAGTCAGAGCGACAGAAGCAAGAAACCTTTTCATCCTGTATTAGTTGAACTAGTAAATTCACAGAAAAAAGGAAAGCCTAACCCAGAACAAAGATACTTTCAGcttGTCGTTGGACTGCATGCCCACACAACAAATGGAAATTTTCCTGTTATAAGCCATGCcagtcaaaaaattattgttcgGgcaTCCAATCCAGGACAGTTCGAAAGTGATGTAGAATTATGCTGGCAAAAGGGACAAACTCAGgaTTCAGTGGTTCATAATGGTAGAGTTGGGATAAATACTGATAGGCCTGATGAGTCCCTTGTGGTGCACGGTAACATAAAGATAACAGGCCACATTATCCAGCCCAGTGATATAAGAGCAAAGAAGAATATTGTGGAATGCAATACTGCTGAACAgcttaaaaatgtacaaaaactGAGAGTTGTTAGATATGAATATGAGCCAGCTCTAGCGTCACAATTAAGTCGAAGTAGTGAGTGCTCCGATACTGGTGTTATAGCGCAAGAGGTGGCTCAGGTACTTCCGGAGGCAGTTAAGCCAGCAGGAAATCTCGTTTTGGAGAATGGTACTTCGATTGACAACTTTTTAGTAGTAAATAAgGAAAGaatatttatggaaaatatagGGGCCGTGAAGGAGCTCTGCAAAGTAACAGATAATTTGGAGACGAGGATAGATCAATTAGAGAGGATTAACAGGcggttaaataaattgaagagaGGTGACAGCCTTAAATCTACAAGCACTGTCAATAGTTCGAAGTTGTCATACTCACATAAATGTTCCAAACATCACCATTCTTGTCACAAAGAGGAAGAACTATGTTCGAATAAGTTTATACAAATTGTTATAGTTGTTTTGGTGTTAATTATGGCCTTTtgTTTGGCAGCCATTACCACTTTATATTTAATGGAAGCTGCCCGACACACTCAGTATATGCAAACTAATATAGATGGATCTCATAGAAATCATGTTACGAAGAGACCTACTAAGTCTACAAAAATGCATACGTGGCCCTCCACGTTGCCACCTTATCATTCCACAAATTCGTATAAGGAGGATGaaataaccaAAATTACATTGGACGCGAATATTATGAGGCCTTCCTTTATAATAGGTAGACCATTAGATTGTCTGACAGTAGAACAAGATCTTGAAAGTACAAATTTATGCCAGatttattgttGTGCAAATCCTCCACAGAGGCCACCTCAAGAAATCACCACATCACTATTTTCTGAAAAGAAGCCTCCGAGCGCTAATAGAAATAAAACTGACAAAAAAAGGGACACGTACGACATCACAGACGAGGCTAATTCATTCGACGTTACAGatgaccaaatatttactataataatCCAAGGAAGACATTTTAATACAACTCTGACACATAAATACAGGAAAGTTGTTTCAAACCCGCAGTTCAATTTTTCCTATTCTGTTCCTATATCAAAATATATGCCTGATGAATTTATTAACTTAATATTTAGgtccAACCCAGCGATTATAAAAGAAATCGAGCATTGCTACAATGATTATAAGCAACATGAATGTCCATTTCTTAGTCCTATGTATTACGACGATAAGTCCAGGATAAGgcataaagttaatgaaaacaGTCCCAGCCAACTTTTAAGTCTTCAGAGTGTCATTTTTGAGGTTGATATGGCTGATTTTCAATCAAAAGTCATGACCTACAGGGTTTCTCTTCATCAAAGTCAGCTCAAAAATGTTCTTTCACAGTTCTCCAAAGAAAATGCTCCAGCTGAGTCAAATCAGGAAATCTTGGAGGCCAAGGAATGGATTCTCTTATTATTTCAATGGGATAATGCTGATTTAAGAGGTACCTATTTCCCTGATtggatgattttttaa
- Protein Sequence
- MVRFKKVKALNLIKYKYCAFLPEHCATSQLSPSEQLSSSIDEEYASSEACLSESQYQCIRFNAFQQTNWHLLCDQNLTELPIPHYRVDADKGFNFSNADDAFVCQKKNHFQITCHVQLLGDAQFVKTPDGFQKISSFHLHFYGVKHDCPTQTIRVEQSQSDRSKKPFHPVLVELVNSQKKGKPNPEQRYFQLVVGLHAHTTNGNFPVISHASQKIIVRASNPGQFESDVELCWQKGQTQDSVVHNGRVGINTDRPDESLVVHGNIKITGHIIQPSDIRAKKNIVECNTAEQLKNVQKLRVVRYEYEPALASQLSRSSECSDTGVIAQEVAQVLPEAVKPAGNLVLENGTSIDNFLVVNKERIFMENIGAVKELCKVTDNLETRIDQLERINRRLNKLKRGDSLKSTSTVNSSKLSYSHKCSKHHHSCHKEEELCSNKFIQIVIVVLVLIMAFCLAAITTLYLMEAARHTQYMQTNIDGSHRNHVTKRPTKSTKMHTWPSTLPPYHSTNSYKEDEITKITLDANIMRPSFIIGRPLDCLTVEQDLESTNLCQIYCCANPPQRPPQEITTSLFSEKKPPSANRNKTDKKRDTYDITDEANSFDVTDDQIFTIIIQGRHFNTTLTHKYRKVVSNPQFNFSYSVPISKYMPDEFINLIFRSNPAIIKEIEHCYNDYKQHECPFLSPMYYDDKSRIRHKVNENSPSQLLSLQSVIFEVDMADFQSKVMTYRVSLHQSQLKNVLSQFSKENAPAESNQEILEAKEWILLLFQWDNADLRGTYFPDWMIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -