Rbic064407.1
Basic Information
- Insect
- Rhamnusium bicolor
- Gene Symbol
- Trerf1
- Assembly
- GCA_029963845.1
- Location
- JANEYF010005380.1:1595662-1626468[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-10 1.1e-06 30.7 0.1 2 46 228 272 227 272 0.96 2 2 2.9 9.5e+03 -1.1 0.1 23 46 271 293 270 293 0.75
Sequence Information
- Coding Sequence
- atgataaaaacagtGCAATGTGCTATACCAACGAAACAAATTATCAATCGGCCTAAGCAAGTCatagaaattaagaaagaagAGAACAACGATGTGTTTCTTAGCCCCACAACgaTTCCAGCCAGTCCGGTGCGGACATCCAGAAAAAGGCCTAGAACTGAACCTCTACAGTTACCAGTTTTTCACCAGTCCAAATTAAGGGCAACAAGAAGTAAACCCCAAGGATGTGCTCCATATACTCCGCAGCCAATACTCAATCCACAAAGGCCTGGTACAGGACTGTATTcgaatttaaaaagtaaattaaAAGATGAAGGACTAAACTGGAACAGTGAGCCTATTCCAGAGAGTGATTCCACCCCTCACATAAATATAGGCACTCAGTTCCAATGTAATGTTCCTCCTTTTACGTCTGCTCCAAATAGGACGAATCTGGAACCAACATATGAGGATTTACTTTGGGATCCTGGTATAAACAACTGCACTGACAGTGAAgTTGACATGTATCTGGATTTCGCGTGCTGCGCTGCAGTCCCTGGCGGAGGAAGGAATAAGGAATATGCCATGCATCTTCTTCACATGTGTGGAGGGAACATTCATGACGCCATGCTGCGACTGATGCAACCCTCTCCAAACCTACCCACAGATCATCCGCTTTTGGCCTATCAGTACAGCGAAAGTGACAAATGGTCTTCAGTGGAAACTGAAATTTTCCACAAAGCACTGCTCAAATATGATAAAGAATTCCGCAGCATCGCTCAAGAGATTCGAACTAAAACCGTAAAGCAATGTGTGCAGTTCTACTATGTCTGGAAAAAGGTATGCGCTGATGAGTACCGTAGACTGAAACAATTGCGggaaagaagaaataatcatCTAAGAAGTACAGATTCCGAGATGGATGAAAAACTCTATCCAGACGCCAAATTATTAGGTATTGCAGACAGTGGGTCGCCAATGCCTGCACCAGAAACAAGGGGTTTCGTTTGTGAATTTCCCGATTGCTCAGctagtTTTAATTCCCGAGCGGCCCTAAATGGACACATACGAATACATGGTGGCACTGCGCGAAATTCCCCCACCCCCGCTTCAACCAACGCCCCGGAAAAAAGAACACAGCCTGTAAGCTCAACTGTTTGCCACCCCGACTCAACAGAAGAGTACCCCTGTAAGATATGCGGGAAAACTTCTTTAAGCTACTGGAGTTTTGTTGTTTCTATGTTCACTAGAATTCGCCATAGTGGCAATCCTTATAGTGGGGCGGAGAACTGTCCTAATCATTCACCAACCCAATCATGA
- Protein Sequence
- MIKTVQCAIPTKQIINRPKQVIEIKKEENNDVFLSPTTIPASPVRTSRKRPRTEPLQLPVFHQSKLRATRSKPQGCAPYTPQPILNPQRPGTGLYSNLKSKLKDEGLNWNSEPIPESDSTPHINIGTQFQCNVPPFTSAPNRTNLEPTYEDLLWDPGINNCTDSEVDMYLDFACCAAVPGGGRNKEYAMHLLHMCGGNIHDAMLRLMQPSPNLPTDHPLLAYQYSESDKWSSVETEIFHKALLKYDKEFRSIAQEIRTKTVKQCVQFYYVWKKVCADEYRRLKQLRERRNNHLRSTDSEMDEKLYPDAKLLGIADSGSPMPAPETRGFVCEFPDCSASFNSRAALNGHIRIHGGTARNSPTPASTNAPEKRTQPVSSTVCHPDSTEEYPCKICGKTSLSYWSFVVSMFTRIRHSGNPYSGAENCPNHSPTQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -