Rbic047858.1
Basic Information
- Insect
- Rhamnusium bicolor
- Gene Symbol
- GT-1
- Assembly
- GCA_029963845.1
- Location
- JANEYF010003954.1:576542-582529[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0019 6.2 9.1 1.6 1 46 73 132 73 132 0.90 2 4 0.00094 3.1 10.1 0.9 1 45 197 255 197 256 0.84 3 4 7.1e-05 0.23 13.6 0.4 3 45 329 385 328 386 0.87 4 4 6.9e-06 0.022 16.9 0.2 3 43 485 539 483 542 0.83
Sequence Information
- Coding Sequence
- atggaacctcttgaaatatttgattccattaataacaaacatataaatatatatgtaacaTCGGAGGTCGCCGAAAAATGTCGCACAGaTAACGCATTTGCCCAAGATTTGTTTAATAAACTACAGGATCAGAATATTGAGGATGGAAGTGCTGTAGAAATAGAAACGATAAAGACTGAGGCTGTCGATGATTTAATATACGAAGAGAAAATTGATAAGGAAACATGGTCTAGACGTGATActttaaaacttattaaagtGTATCAGAGAAATAAGGGTAAATTTGAAGAGTATAAACAGAGGAAAGTTGTTTGGACCATGATTGCCAATGAATTAGCCCAACTTAACGTTTACAAATCGGCAGATAAATGTGCTGAGAAATGGAAAAATCTCTTAAGAACATATAAAAATGCTAATGAAAAACCGTCTGTACCCACTAGGTTTCAATATTACCAGGAAATGAGAGATATATTTAGTAACACTCAAGTGACAGTCTCCGATAGTGATTTGGATGATATGGAAATAGAATACAAATCTACAGTACCAGTAAATCCTTTAAGCATAGATTCAAAAGAAGAACCTATTGAAAAAGAATCCTGGTCAAGATATGAAACTCTCAAGTTATTAAAAGCCTATCAAAAGCATAGAGatgtaaaaaagaattttgtgaAAGAAAAACAGTTTTGGGCTGTAATTTCTGGTGAATTAGCCAAAGATAATATTCAGAAACCATTGGATAAGTGTGCAACTAAATGGAAGAATCTTTTCCGAAGTTACAAGAAAAATGTAGAGAAACCTTCGTTACCTTCaagatttcaatattttcaagaagttagtgatgtaataaataatgttgaattaTTTGTACCTGACAACTTGATGGATGTTTcagatgATGTGGATTTTGATAAGGTTCTAGATCCAGACCAATTCAAATGTTTCCTGGACGAAACTGATTGTGAAAATAATCCCCGAGATATCTGTTCTTGGACAGGTGATGAAACATTAAAGCTCATAATGgcttataaaaaacataaacacaGATTTAAGACAtgccccacaaaaaaatatgtttggacAATTATAGCTGCAGAGCTTACCCAACAAGGCATCCTAAGAGATTCAGGCAAATGTGAGAACAAGTGGAAAAGTCTTATGCGCTCTTACAGGAAAAGCATAAAAACTGGGGAAACTccgagattttatttttttgataaaatgtctGAAGTACTGAATGATgaaggtaactcggtaactagTGATGAGGTGATCACAACTCAAAAGGACATATCTTTAGTTTACGACAATATGGACTCCTTAAATAATGCGGATTCCttagataacactgacatattAGAAAACGAAGATAAGGGTGATactgaaaatatcaaatatgaagaaataataatagaaactGAACCTGTTAAACAGGATGAGACTGATGATAACAGGTATTGGTCGTTTAATGAATCCTCAGCTCTGCTTAAAGCTTATGCAAGTCATagaaataaattcaaagaaGTAAAgagaaaaatgcaaatatgGGAGGAAATTTCTCAGGAACTTGAATCACTTAATATCTACAAATCCCCAGAGAGTTGTGaaaataaatggaaaggtaTGTTTAATGTGTACAAGacacacaaattaaacaaaacaggACCTGGAAAGTttagtttttataaagaaatagaCGATATGCTTAAGGAGAAAACTATTGTAGATGATGTTGATGATAATGTTGTACATAACAAAAAGTGCAAGTGTATGGAAAAAAGAatgttggaaaaacaaaaaaagacataTTGA
- Protein Sequence
- MEPLEIFDSINNKHINIYVTSEVAEKCRTDNAFAQDLFNKLQDQNIEDGSAVEIETIKTEAVDDLIYEEKIDKETWSRRDTLKLIKVYQRNKGKFEEYKQRKVVWTMIANELAQLNVYKSADKCAEKWKNLLRTYKNANEKPSVPTRFQYYQEMRDIFSNTQVTVSDSDLDDMEIEYKSTVPVNPLSIDSKEEPIEKESWSRYETLKLLKAYQKHRDVKKNFVKEKQFWAVISGELAKDNIQKPLDKCATKWKNLFRSYKKNVEKPSLPSRFQYFQEVSDVINNVELFVPDNLMDVSDDVDFDKVLDPDQFKCFLDETDCENNPRDICSWTGDETLKLIMAYKKHKHRFKTCPTKKYVWTIIAAELTQQGILRDSGKCENKWKSLMRSYRKSIKTGETPRFYFFDKMSEVLNDEGNSVTSDEVITTQKDISLVYDNMDSLNNADSLDNTDILENEDKGDTENIKYEEIIIETEPVKQDETDDNRYWSFNESSALLKAYASHRNKFKEVKRKMQIWEEISQELESLNIYKSPESCENKWKGMFNVYKTHKLNKTGPGKFSFYKEIDDMLKEKTIVDDVDDNVVHNKKCKCMEKRMLEKQKKTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -