Basic Information

Insect: Rhamnusium bicolor
Gene Symbol: SNAPC4
Assembly: GCA_029963845.1
Location: JANEYF010000205.1:384640-398308[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.078 2.5e+02 3.9 0.0 3 18 189 204 188 207 0.92

2 6 0.85 2.8e+03 0.6 0.1 32 45 270 283 258 284 0.66

3 6 2.3e-09 7.5e-06 28.0 0.0 1 35 290 326 290 337 0.91

4 6 7e-11 2.3e-07 32.9 0.1 1 46 343 392 343 392 0.97

5 6 2.2e-10 7.2e-07 31.3 0.0 1 46 399 444 399 444 0.96

6 6 3.8e-12 1.2e-08 36.9 0.1 1 45 450 494 450 495 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.078	2.5e+02	3.9	0.0	3	18	189	204	188	207	0.92
2	6	0.85	2.8e+03	0.6	0.1	32	45	270	283	258	284	0.66
3	6	2.3e-09	7.5e-06	28.0	0.0	1	35	290	326	290	337	0.91
4	6	7e-11	2.3e-07	32.9	0.1	1	46	343	392	343	392	0.97
5	6	2.2e-10	7.2e-07	31.3	0.0	1	46	399	444	399	444	0.96
6	6	3.8e-12	1.2e-08	36.9	0.1	1	45	450	494	450	495	0.95

Sequence Information

Coding Sequence: ATGGATGATGAAGAGGATGTAATGAAAATGATAGAATTCTTAAAATGCAGTAAAGAAgaaaacgTACAAGAATATCAATATGAAGAGTTCATTAATTGCGATGGAAGTGATGCAGAAGAGATTgacacaaatataaatatagaagATTCCATAGgagatgaaattatttatacCGATCTTTCAAACACAGATATTTCAAGATTTCACTCATACGATCCCAGAAATTCCCTAAAACCAGATGAACGGGCCGTAATAGATTCCTGTCCCGATGCAGAATTAAAGAATATCCTACTTTTAAATCGAACTCAGAACATGCAACTTATACAgctgtataaaaaaatgaaagattTGTTGATAGAATGTcaacaaaacattattaaaaaaactgatattatAAAGGAACACGTAACAGCCAATAAAGATCAGACTAACTCTACTGGAGCATGGCGTTTAGCTGCTCCATATTTTAAGGATAAACAACTTTATCCTAGTCCTTCAAatgcagaaacgattcgaaagaaaaacaataatgaattgTGTATATATGATCTTTCGATTTTACCAAAGTGGTCAACTGTTGAGtgtgaaaaattaataaggGCGGTTAAATTGAATTACAACATTAATCAACAGAATGAGGTAGTGAAAGCCATCCAGAAAGCAAAGCAAGATAATAATCTGGAGTTGCTCAAAGAACTAGAAGAGAGAAAGAAAGAATTAAAGGAAAATGATAATTCCGAAATACCTCCCGTAAATTCTGATAAATATATTGATTGGATGAGAGTTTCAGATGTATTCCTTAAAGataaacatTCATCGTTTGAATGTAAATCATTTTGGCATATTTACTTGCACCCCGATATTAATAAATCTACATGGACACCTAAagaacattcaaaattaaaggaAGTAGCCAAAAGGTATGAATTCCAAAATTGGGATCAAATAGCGAAGGATTTAGGAACCAATCGAACTGGTTTTACGGTATGCATGAATTATTTCGGCAATTTGCACGACAGGTTCAAAAAGGGAGAATTTACACATCAAGAGGACTCTAGATTGCTTGAACTGGTCCAGCAGTACAAGATGGGTAGCTATATTCCATGGACTAAAATCGTTCAACATTTCAAGAAAAGAACGAGGTCACAGCTGCATTATCGCTACACTTATTATCTCAGTCAACACGATAAGAGGAGAGGTAAATTTACTGATGCAGAGGatatattattgatgataattgttgataaatttggaaaaaactacaaaaaatgctGTGAGTATTTACCAACAAGATCGATGGTTCAGTGTAAAGCACGGTACAGCACAAACTtacaaaattctttaaagaaaGGGTCGTTCACAGTAGAAGAAGACGAAATAATTATGAAGTATGTTGAGAAACATGGTTCAAAATCTTGGACCAATCTGACGGATAAATTGCACAGATCCAGAGGGCAGATTAGGCAACGATATATCACTATAAAGCAATTTCTGGATGCTAATCCTGATAAAGAAATTGCTGCGGTGACTcgaagaaaacataatttgaaaTCTGAAGAAGAATCTTTTCATTCTTTAAGagcTATTGCTGACGAGTACCGAGACAATCCGACTATTCCAACTTTAGATGAAATTGAAGCGGTCCTGAAGAGGAGAACTAGTAATAAAGACATTGTTAATTCCGATGAAGTAGATAGTGATGTTGAAGAAATTGCAACGACGTCAAACGTCAGCTTCGCAGGAACGCCAGCAAATGATATGGGTGTCGATGATCTGCTAACAGCCTTTTTTTGCAACTCTTTCAAAGTAAATACTACAAAAATGATTTCATCATTGAACTTGAGAAGAGCTGTGAACAGCGTTAAGTCACTTTTGGATATCCTAAAAGCGAAATTAGATATACCCGAAAATTTTGATGAGGATATGACATTGGATAATTTAGATGTGGCCATATTAAATAGTTTATCTGAAGAAAACTCTAATATGTGTGAGTACAACGTGGGATCCGCAGACAGTATCACTGATTTGGTTCCGCCAAACCTAAACACCGTAGTAGGTTTAAGAagtcttttaataaaattttcgcaTTATAGATCGGAGGAGAAACAagcaatgacaaaatttatTCAAGGTGCCCAGAGGCAGTCATCTACTGCGATTAGAAGTGATGTAGTGAGGCATTTTTTAAGCTTACCTCCCGACATTAAGCAGGAAGTTGCGGCGGAtcgtaaattattttacaaacgtTTTCATGCTCTGTTTAAGTGGCCTGCTATAATGACCCTGGAAAATCCCTCTGCAGAATTGCAAAGTACCGCTAAAGGTTTTACACCTCGCGCTCCCATTGACGTTAAAAGAACTTACAGTAGACAACCTAAGAATAGTCCTCCAGTGAAACGTGTAAAAGTCACCGAACTACCTAGTACGTCATCGGCCGCAGCACCTTTAAAACTAACCCCAGTTACTAACAAGAGTGTGCTAGAGGATCTGCTGCGTgacaaaactaaaaagttattttatttcgaTAAGGTTGTAAGTGGTggaaaaactaaaacaataataaaacaaatacctttACCATCTATTAATAAACAGTTAACTTCAAATGGTTCCAGTGGTAAAAACATTGACATAACCTCTAGTGTGGTCAAAAAAGATTATTCCTCTAAAATTTGTTGTGAAAAAGCCAGTGGCAGCAATCAAGAATCTTCTCATTTTGATACAGAACATGGCGAGTGTGTTATAATGGATACCGATGACGATACCGAGAGTGTTGCTACTGGAATTGATGGCAGTATTATAGATGATGAAGAAGATCTGAAAAagttaaatacgtttcttggaAGTGAATATATGGAGGATCAATGTGAAGaTGACGATTTGGAGGACCTTaataagttgaatattttcttgaaaacagAAGTAACTAATGAAACTAGTGATGAATCATTTGGATAG
Protein Sequence: MDDEEDVMKMIEFLKCSKEENVQEYQYEEFINCDGSDAEEIDTNINIEDSIGDEIIYTDLSNTDISRFHSYDPRNSLKPDERAVIDSCPDAELKNILLLNRTQNMQLIQLYKKMKDLLIECQQNIIKKTDIIKEHVTANKDQTNSTGAWRLAAPYFKDKQLYPSPSNAETIRKKNNNELCIYDLSILPKWSTVECEKLIRAVKLNYNINQQNEVVKAIQKAKQDNNLELLKELEERKKELKENDNSEIPPVNSDKYIDWMRVSDVFLKDKHSSFECKSFWHIYLHPDINKSTWTPKEHSKLKEVAKRYEFQNWDQIAKDLGTNRTGFTVCMNYFGNLHDRFKKGEFTHQEDSRLLELVQQYKMGSYIPWTKIVQHFKKRTRSQLHYRYTYYLSQHDKRRGKFTDAEDILLMIIVDKFGKNYKKCCEYLPTRSMVQCKARYSTNLQNSLKKGSFTVEEDEIIMKYVEKHGSKSWTNLTDKLHRSRGQIRQRYITIKQFLDANPDKEIAAVTRRKHNLKSEEESFHSLRAIADEYRDNPTIPTLDEIEAVLKRRTSNKDIVNSDEVDSDVEEIATTSNVSFAGTPANDMGVDDLLTAFFCNSFKVNTTKMISSLNLRRAVNSVKSLLDILKAKLDIPENFDEDMTLDNLDVAILNSLSEENSNMCEYNVGSADSITDLVPPNLNTVVGLRSLLIKFSHYRSEEKQAMTKFIQGAQRQSSTAIRSDVVRHFLSLPPDIKQEVAADRKLFYKRFHALFKWPAIMTLENPSAELQSTAKGFTPRAPIDVKRTYSRQPKNSPPVKRVKVTELPSTSSAAAPLKLTPVTNKSVLEDLLRDKTKKLFYFDKVVSGGKTKTIIKQIPLPSINKQLTSNGSSGKNIDITSSVVKKDYSSKICCEKASGSNQESSHFDTEHGECVIMDTDDDTESVATGIDGSIIDDEEDLKKLNTFLGSEYMEDQCEDDDLEDLNKLNIFLKTEVTNETSDESFG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -